RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 SUPT16HQ9Y5B9 1047 aaKnown RBP6.92□□□□□ -1.3
PABPN1-204ENST00000554062 FAM177BA6PVY3 158 aa6.91□□□□□ -1.3
PABPN1-204ENST00000554062 NRG2O14511 850 aaPredicted RBP6.91□□□□□ -1.3
PABPN1-204ENST00000554062 EIF4A3P38919 411 aaKnown RBP6.91□□□□□ -1.3
PABPN1-204ENST00000554062 GPLD1P80108 840 aa6.91□□□□□ -1.3
PABPN1-204ENST00000554062 SFSWAPQ12872 951 aaKnown RBP6.91□□□□□ -1.3
PABPN1-204ENST00000554062 NFX1Q12986 1120 aaKnown RBP6.91□□□□□ -1.3
PABPN1-204ENST00000554062 DHX32Q7L7V1 743 aaKnown RBP6.91□□□□□ -1.3
PABPN1-204ENST00000554062 MCF2L2Q86YR7 1114 aa6.91□□□□□ -1.3
PABPN1-204ENST00000554062 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
PABPN1-204ENST00000554062 TRERF1Q96PN7 1200 aa6.91□□□□□ -1.3
PABPN1-204ENST00000554062 NT5C1AQ9BXI3 368 aa6.91□□□□□ -1.3
PABPN1-204ENST00000554062 IRX2Q9BZI1 471 aaPredicted RBP6.91□□□□□ -1.3
PABPN1-204ENST00000554062 KCNQ5Q9NR82 932 aa6.91□□□□□ -1.3
PABPN1-204ENST00000554062 SENP3-EIF4A1A0A087X0R7 540 aa6.9□□□□□ -1.3
PABPN1-204ENST00000554062 CYP2E1P05181 493 aaPredicted RBP6.9□□□□□ -1.3
PABPN1-204ENST00000554062 HNRNPUQ00839 825 aaKnown RBP eCLIP6.9□□□□□ -1.3
PABPN1-204ENST00000554062 PPP2R3AQ06190 1150 aa6.9□□□□□ -1.3
PABPN1-204ENST00000554062 CCDC84Q86UT8 332 aaPredicted RBP6.9□□□□□ -1.3
PABPN1-204ENST00000554062 TCF12Q99081 682 aa6.9□□□□□ -1.3
PABPN1-204ENST00000554062 ZKSCAN3Q9BRR0 538 aa6.9□□□□□ -1.3
PABPN1-204ENST00000554062 OSBPL2Q9H1P3 480 aa6.9□□□□□ -1.3
PABPN1-204ENST00000554062 LATS2Q9NRM7 1088 aa6.9□□□□□ -1.3
PABPN1-204ENST00000554062 ROBO2Q9HCK4 1378 aa6.9□□□□□ -1.31
PABPN1-204ENST00000554062 SLC35F4A4IF30 521 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 LIG3P49916 1009 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 PTSQ03393 145 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 CEP120Q8N960 986 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 TRPM4Q8TD43 1214 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 DDX54Q8TDD1 881 aaKnown RBP6.89□□□□□ -1.31
PABPN1-204ENST00000554062 BHMTQ93088 406 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 COPRSQ9NQ92 184 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 AVENQ9NQS1 362 aaPredicted RBP6.89□□□□□ -1.31
PABPN1-204ENST00000554062 NDFIP2Q9NV92 336 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 DZANK1Q9NVP4 752 aa6.89□□□□□ -1.31
PABPN1-204ENST00000554062 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
PABPN1-204ENST00000554062 GHRHP01286 108 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 LMNB2Q03252 620 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 CCDC144BQ3MJ40 725 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 SNAP47Q5SQN1 464 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 SCARA3Q6AZY7 606 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 CACTIN-AS1Q8N1I8 211 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 ZNF296Q8WUU4 475 aaPredicted RBP6.88□□□□□ -1.31
PABPN1-204ENST00000554062 RHOVQ96L33 236 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 ATP13A2Q9NQ11 1180 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 ZFATQ9P243 1243 aa6.88□□□□□ -1.31
PABPN1-204ENST00000554062 CADPSQ9ULU8 1353 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 PDE2AO00408 941 aaPredicted RBP6.87□□□□□ -1.31
PABPN1-204ENST00000554062 U2SURPO15042 1029 aaKnown RBP6.87□□□□□ -1.31
PABPN1-204ENST00000554062 CLSTN1O94985 981 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 FGFR3P22607 806 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 SOX9P48436 509 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 UBAP2LQ14157 1087 aaKnown RBP6.87□□□□□ -1.31
PABPN1-204ENST00000554062 TNNI3KQ59H18 835 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 TPTE2Q6XPS3 522 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 PHC3Q8NDX5 983 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 PMFBP1Q8TBY8 1022 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 MKL1Q969V6 931 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 MRFAP1L1Q96HT8 127 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 PBX4Q9BYU1 374 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 ZSWIM4Q9H7M6 989 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 ADAMTS1Q9UHI8 967 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 PRR12Q9ULL5 1215 aa6.87□□□□□ -1.31
PABPN1-204ENST00000554062 R3HCC1Q9Y3T6 440 aaKnown RBP6.87□□□□□ -1.31
PABPN1-204ENST00000554062 A0A096LPE4 126 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 A0A1W2PPZ6 126 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 MINDY4BA8MYZ0 360 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 BNIP3LO60238 219 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 NASPP49321 788 aaPredicted RBP6.86□□□□□ -1.31
PABPN1-204ENST00000554062 APOBRQ0VD83 1088 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 LRRC14Q15048 493 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 TTBK2Q6IQ55 1244 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 AGMOQ6ZNB7 445 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 CCDC155Q8N6L0 562 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 CPLX3Q8WVH0 158 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 NSUN5Q96P11 429 aaKnown RBP6.86□□□□□ -1.31
PABPN1-204ENST00000554062 NECAB3Q96P71 396 aaPredicted RBP6.86□□□□□ -1.31
PABPN1-204ENST00000554062 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
PABPN1-204ENST00000554062 GPN3Q9UHW5 284 aaPredicted RBP6.86□□□□□ -1.31
PABPN1-204ENST00000554062 LOC102724428A0A0B4J2F2 783 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 TLDC2A0PJX2 215 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 SIN3BO75182 1162 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 IMPDH2P12268 514 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 PTPRAP18433 802 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 CD33P20138 364 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 CDK11BP21127 795 aaKnown RBP6.85□□□□□ -1.31
PABPN1-204ENST00000554062 SIK1P57059 783 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 TRIM42Q8IWZ5 723 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 BSNDQ8WZ55 320 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 NXPE3Q969Y0 559 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 ZNF837Q96EG3 531 aaPredicted RBP6.85□□□□□ -1.31
PABPN1-204ENST00000554062 ABHD17AQ96GS6 310 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 CNTNAP3BQ96NU0 1288 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 LRRC3Q9BY71 257 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 CNTNAP3Q9BZ76 1288 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 CLEC4MQ9H2X3 399 aaPredicted RBP6.85□□□□□ -1.31
PABPN1-204ENST00000554062 ZNF576Q9H609 170 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 SIRPGQ9P1W8 387 aa6.85□□□□□ -1.31
PABPN1-204ENST00000554062 CDK11AQ9UQ88 783 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms