RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 A0A1W2PP55 124 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 TTC24A2A3L6 582 aaPredicted RBP8.82□□□□□ -1
TGFBR1-208ENST00000550253 K7ELQ4 463 aaPredicted RBP8.82□□□□□ -1
TGFBR1-208ENST00000550253 SMPD1P17405 629 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 CES1P23141 567 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 MSX1P28360 303 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 PEAR1Q5VY43 1037 aaPredicted RBP8.82□□□□□ -1
TGFBR1-208ENST00000550253 PRICKLE2Q7Z3G6 844 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 RELL1Q8IUW5 271 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 RNF217Q8TC41 542 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 MKL1Q969V6 931 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 EAF1Q96JC9 268 aaPredicted RBP8.82□□□□□ -1
TGFBR1-208ENST00000550253 TMEM74Q96NL1 305 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 EHD4Q9H223 541 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 LATS2Q9NRM7 1088 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 PPP4R2Q9NY27 417 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 TRAK1Q9UPV9 953 aa8.82□□□□□ -1
TGFBR1-208ENST00000550253 ADAMTSL3P82987 1691 aa8.81□□□□□ -1
TGFBR1-208ENST00000550253 A0A1B0GTH6 734 aa8.81□□□□□ -1
TGFBR1-208ENST00000550253 A0A1W2PNR3 127 aa8.81□□□□□ -1
TGFBR1-208ENST00000550253 MINDY4BA8MYZ0 360 aa8.81□□□□□ -1
TGFBR1-208ENST00000550253 SSBP05455 408 aaKnown RBP eCLIP8.81□□□□□ -1
TGFBR1-208ENST00000550253 EIF4A3P38919 411 aaKnown RBP8.81□□□□□ -1
TGFBR1-208ENST00000550253 NASPP49321 788 aaPredicted RBP8.81□□□□□ -1
TGFBR1-208ENST00000550253 CCDC85BQ15834 202 aaPredicted RBP8.81□□□□□ -1
TGFBR1-208ENST00000550253 PRPF40BQ6NWY9 871 aaKnown RBP8.81□□□□□ -1
TGFBR1-208ENST00000550253 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
TGFBR1-208ENST00000550253 CEP63Q96MT8 703 aa8.81□□□□□ -1
TGFBR1-208ENST00000550253 TOR4AQ9NXH8 423 aa8.81□□□□□ -1
TGFBR1-208ENST00000550253 MRPL42Q9Y6G3 142 aaKnown RBP8.81□□□□□ -1
TGFBR1-208ENST00000550253 F6X3S4 739 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 GDF9O60383 454 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 CYP2E1P05181 493 aaPredicted RBP8.8□□□□□ -1
TGFBR1-208ENST00000550253 XRCC5P13010 732 aaKnown RBP8.8□□□□□ -1
TGFBR1-208ENST00000550253 NFX1Q12986 1120 aaKnown RBP8.8□□□□□ -1
TGFBR1-208ENST00000550253 TTC39BQ5VTQ0 682 aaPredicted RBP8.8□□□□□ -1
TGFBR1-208ENST00000550253 MRFAP1L1Q96HT8 127 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 KCNQ5Q9NR82 932 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 PPM1HQ9ULR3 514 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 EFR3BQ9Y2G0 817 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 ARAP3Q8WWN8 1544 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 FRMPD1Q5SYB0 1578 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 HSD3B2P26439 372 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 GBP2P32456 591 aaPredicted RBP8.8□□□□□ -1
TGFBR1-208ENST00000550253 ETFBP38117 255 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 SOX9P48436 509 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 FCGRTP55899 365 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 LYSMD3Q7Z3D4 306 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 CYP4X1Q8N118 509 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 ZNF296Q8WUU4 475 aaPredicted RBP8.8□□□□□ -1
TGFBR1-208ENST00000550253 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
TGFBR1-208ENST00000550253 GPATCH3Q96I76 525 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 GINM1Q9NU53 330 aa8.8□□□□□ -1
TGFBR1-208ENST00000550253 ABCA9Q8IUA7 1624 aa8.79□□□□□ -1
TGFBR1-208ENST00000550253 EDN3P14138 238 aa8.79□□□□□ -1
TGFBR1-208ENST00000550253 HPS1Q92902 700 aa8.79□□□□□ -1
TGFBR1-208ENST00000550253 RHOVQ96L33 236 aa8.79□□□□□ -1
TGFBR1-208ENST00000550253 NT5C1AQ9BXI3 368 aa8.79□□□□□ -1
TGFBR1-208ENST00000550253 ABCB6Q9NP58 842 aa8.79□□□□□ -1
TGFBR1-208ENST00000550253 TIMMDC1Q9NPL8 285 aa8.79□□□□□ -1
TGFBR1-208ENST00000550253 SIGLEC1Q9BZZ2 1709 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 GOLGA3Q08378 1498 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 PRXQ9BXM0 1461 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 KLF4O43474 513 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 RLBP1P12271 317 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 IFFO2Q5TF58 517 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 FBXL19Q6PCT2 694 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 SV2BQ7L1I2 683 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 OXCT2Q9BYC2 517 aaPredicted RBP8.78□□□□□ -1
TGFBR1-208ENST00000550253 ZCCHC2Q9C0B9 1178 aaKnown RBP8.78□□□□□ -1
TGFBR1-208ENST00000550253 CRISPLD1Q9H336 500 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 KANSL3Q9P2N6 904 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 SALL4Q9UJQ4 1053 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 STRIP2Q9ULQ0 834 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 BCORL1Q5H9F3 1711 aa8.78□□□□□ -1
TGFBR1-208ENST00000550253 ATP10BO94823 1461 aa8.77□□□□□ -1
TGFBR1-208ENST00000550253 MADDQ8WXG6 1647 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 TMEM238LA0A1B0GVL6 79 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 GREM1O60565 184 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 GARTP22102 1010 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 ANKS3Q6ZW76 656 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 PHC3Q8NDX5 983 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 BRD7Q9NPI1 651 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 SIRPGQ9P1W8 387 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 MRVI1Q9Y6F6 885 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 PTPRMP28827 1452 aa8.77□□□□□ -1.01
TGFBR1-208ENST00000550253 KCNQ4P56696 695 aa8.76□□□□□ -1.01
TGFBR1-208ENST00000550253 COL9A2Q14055 689 aaPredicted RBP8.76□□□□□ -1.01
TGFBR1-208ENST00000550253 OR13H1Q8NG92 308 aa8.76□□□□□ -1.01
TGFBR1-208ENST00000550253 TCF12Q99081 682 aa8.76□□□□□ -1.01
TGFBR1-208ENST00000550253 SAMD9Q5K651 1589 aa8.76□□□□□ -1.01
TGFBR1-208ENST00000550253 FBXO24O75426 580 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 SASH3O75995 380 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 UPP2O95045 317 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 RHOQP17081 205 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 SAMD5Q5TGI4 173 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 AKAP2Q9Y2D5 859 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 GJA3Q9Y6H8 435 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 ENPP3O14638 875 aa8.75□□□□□ -1.01
TGFBR1-208ENST00000550253 RAB33AQ14088 237 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms