RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 HDGFL1Q5TGJ6 251 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 INTS3Q68E01 1043 aaKnown RBP10.45□□□□□ -0.74
LRP6-204ENST00000540415 ARMC9Q7Z3E5 817 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 PODNQ7Z5L7 613 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 TXNRD3Q86VQ6 643 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 ARMC5Q96C12 935 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 LAS1LQ9Y4W2 734 aaKnown RBP10.45□□□□□ -0.74
LRP6-204ENST00000540415 PCDHAC2Q9Y5I4 1007 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 H0YGN5 161 aa10.44□□□□□ -0.74
LRP6-204ENST00000540415 MYCP01106 439 aaPredicted RBP10.44□□□□□ -0.74
LRP6-204ENST00000540415 KLRK1P26718 216 aa10.44□□□□□ -0.74
LRP6-204ENST00000540415 TRIM28Q13263 835 aaKnown RBP10.44□□□□□ -0.74
LRP6-204ENST00000540415 CRHR2Q13324 411 aa10.44□□□□□ -0.74
LRP6-204ENST00000540415 NEUROD2Q15784 382 aa10.44□□□□□ -0.74
LRP6-204ENST00000540415 ZBTB38Q8NAP3 1195 aaPredicted RBP10.44□□□□□ -0.74
LRP6-204ENST00000540415 ZBED3Q96IU2 234 aaPredicted RBP10.44□□□□□ -0.74
LRP6-204ENST00000540415 WNK4Q96J92 1243 aa10.44□□□□□ -0.74
LRP6-204ENST00000540415 BABAM1Q9NWV8 329 aa10.44□□□□□ -0.74
LRP6-204ENST00000540415 AOX1Q06278 1338 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 TRIOBPQ9H2D6 2365 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 MANSC4A6NHS7 340 aaPredicted RBP10.43□□□□□ -0.74
LRP6-204ENST00000540415 CHL1O00533 1208 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 ALDH1A1P00352 501 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 ATP2B4P23634 1241 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 TMPOP42166 694 aaKnown RBP10.43□□□□□ -0.74
LRP6-204ENST00000540415 CCDC152Q4G0S7 254 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 KIAA0825Q8IV33 1275 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 SLC10A4Q96EP9 437 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 ZNF333Q96JL9 665 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 MYD88Q99836 296 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 PTPN18Q99952 460 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 PHAXQ9H814 394 aaKnown RBP10.43□□□□□ -0.74
LRP6-204ENST00000540415 EFCC1Q9HA90 598 aa10.43□□□□□ -0.74
LRP6-204ENST00000540415 MED23Q9ULK4 1368 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 ANKRD18AQ8IVF6 992 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 CCDC146Q8IYE0 955 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 OGFOD1Q8N543 542 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 OTUD5Q96G74 571 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 ERO1AQ96HE7 468 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 DEFB129Q9H1M3 183 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 DBF4Q9UBU7 674 aaPredicted RBP10.42□□□□□ -0.74
LRP6-204ENST00000540415 MINPP1Q9UNW1 487 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 PTCH2Q9Y6C5 1203 aa10.42□□□□□ -0.74
LRP6-204ENST00000540415 KIAA0100Q14667 2235 aaKnown RBP10.42□□□□□ -0.74
LRP6-204ENST00000540415 CEP290O15078 2479 aa10.41□□□□□ -0.74
LRP6-204ENST00000540415 PDE8AO60658 829 aa10.41□□□□□ -0.74
LRP6-204ENST00000540415 PCCAP05165 728 aaPredicted RBP10.41□□□□□ -0.74
LRP6-204ENST00000540415 STRIP1Q5VSL9 837 aa10.41□□□□□ -0.74
LRP6-204ENST00000540415 CHRDL2Q6WN34 429 aa10.41□□□□□ -0.74
LRP6-204ENST00000540415 RIC3Q7Z5B4 369 aa10.41□□□□□ -0.74
LRP6-204ENST00000540415 APOBEC3FQ8IUX4 373 aaKnown RBP10.41□□□□□ -0.74
LRP6-204ENST00000540415 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
LRP6-204ENST00000540415 COL6A3P12111 3177 aa10.41□□□□□ -0.74
LRP6-204ENST00000540415 ZNF646O15015 1829 aaPredicted RBP10.4□□□□□ -0.74
LRP6-204ENST00000540415 PSME4Q14997 1843 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 CLRN2A0PK11 232 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 DLL1O00548 723 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 ZBTB48P10074 688 aaPredicted RBP10.4□□□□□ -0.74
LRP6-204ENST00000540415 CCT4P50991 539 aaKnown RBP10.4□□□□□ -0.74
LRP6-204ENST00000540415 INHBEP58166 350 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 SP3Q02447 781 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 MAP3K11Q16584 847 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 NBPF12Q5TAG4 269 aaPredicted RBP10.4□□□□□ -0.74
LRP6-204ENST00000540415 DUSP27Q5VZP5 1158 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 TMEM106CQ9BVX2 250 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 GREM2Q9H772 168 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 HYPKQ9NX55 129 aa10.4□□□□□ -0.74
LRP6-204ENST00000540415 SNAP23O00161 211 aa10.39□□□□□ -0.75
LRP6-204ENST00000540415 GTF2IP78347 998 aa10.39□□□□□ -0.75
LRP6-204ENST00000540415 TTLL5Q6EMB2 1281 aa10.39□□□□□ -0.75
LRP6-204ENST00000540415 CERS5Q8N5B7 392 aa10.39□□□□□ -0.75
LRP6-204ENST00000540415 SH3TC2Q8TF17 1288 aa10.39□□□□□ -0.75
LRP6-204ENST00000540415 CNKSR2Q8WXI2 1034 aa10.39□□□□□ -0.75
LRP6-204ENST00000540415 COA1Q9GZY4 146 aa10.39□□□□□ -0.75
LRP6-204ENST00000540415 PNNQ9H307 717 aaKnown RBP10.39□□□□□ -0.75
LRP6-204ENST00000540415 RBM27Q9P2N5 1060 aaKnown RBP10.39□□□□□ -0.75
LRP6-204ENST00000540415 LAMA3Q16787 3333 aa10.39□□□□□ -0.75
LRP6-204ENST00000540415 MYO3BQ8WXR4 1341 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 USP2O75604 605 aaPredicted RBP10.38□□□□□ -0.75
LRP6-204ENST00000540415 ECM2O94769 699 aaPredicted RBP10.38□□□□□ -0.75
LRP6-204ENST00000540415 CTSWP56202 376 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 GOLGA2Q08379 1002 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 LMOD3Q0VAK6 560 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 SLC4A8Q2Y0W8 1093 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 SLC9C1Q4G0N8 1177 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 CDAN1Q8IWY9 1227 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 CCDC191Q8NCU4 936 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 TTLL11Q8NHH1 800 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 ARHGAP39Q9C0H5 1083 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 ELP3Q9H9T3 547 aa10.38□□□□□ -0.75
LRP6-204ENST00000540415 BSDC1Q9NW68 430 aaPredicted RBP10.38□□□□□ -0.75
LRP6-204ENST00000540415 CWC25Q9NXE8 425 aaPredicted RBP10.38□□□□□ -0.75
LRP6-204ENST00000540415 RBBP6Q7Z6E9 1792 aaKnown RBP10.38□□□□□ -0.75
LRP6-204ENST00000540415 TESPA1A2RU30 521 aaPredicted RBP10.37□□□□□ -0.75
LRP6-204ENST00000540415 F8W031 263 aaPredicted RBP10.37□□□□□ -0.75
LRP6-204ENST00000540415 ELL2O00472 640 aaPredicted RBP10.37□□□□□ -0.75
LRP6-204ENST00000540415 PPP1R12BO60237 982 aaPredicted RBP10.37□□□□□ -0.75
LRP6-204ENST00000540415 HOXB7P09629 217 aa10.37□□□□□ -0.75
LRP6-204ENST00000540415 DLGAP5Q15398 846 aa10.37□□□□□ -0.75
LRP6-204ENST00000540415 BRI3BPQ8WY22 251 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms