RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 MPZL3Q6UWV2 235 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 WFDC3Q8IUB2 231 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 SLC9A9Q8IVB4 645 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 TNS4Q8IZW8 715 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 FBXO15Q8NCQ5 510 aaPredicted RBP2.37□□□□□ -2.03
COPB1-212ENST00000534771 SUSD3Q96L08 255 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 PNMA5Q96PV4 448 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 METTL22Q9BUU2 404 aaPredicted RBP2.37□□□□□ -2.03
COPB1-212ENST00000534771 SEMA6CQ9H3T2 930 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 KCNK12Q9HB15 430 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 ZNF358Q9NW07 568 aa2.37□□□□□ -2.03
COPB1-212ENST00000534771 HOXD8P13378 290 aaPredicted RBP2.36□□□□□ -2.03
COPB1-212ENST00000534771 EPHA4P54764 986 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 LINC00310P59036 64 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 PSMA6P60900 246 aaKnown RBP2.36□□□□□ -2.03
COPB1-212ENST00000534771 TYRO3Q06418 890 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 PCSK7Q16549 785 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 HIF1AQ16665 826 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 SH3PXD2AQ5TCZ1 1133 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 ZNF280CQ8ND82 737 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 HSH2DQ96JZ2 352 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 GSX2Q9BZM3 304 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 PHACTR1Q9C0D0 580 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 GDPD2Q9HCC8 539 aa2.36□□□□□ -2.03
COPB1-212ENST00000534771 KRTAP29-1A8MX34 341 aaPredicted RBP2.35□□□□□ -2.03
COPB1-212ENST00000534771 PIK3CDO00329 1044 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 ZBTB7BO15156 539 aaPredicted RBP2.35□□□□□ -2.03
COPB1-212ENST00000534771 ONECUT2O95948 504 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 RXRBP28702 533 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 ABL2P42684 1182 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 HIRAP54198 1017 aaPredicted RBP2.35□□□□□ -2.03
COPB1-212ENST00000534771 NCOA4Q13772 614 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 CCINQ13939 588 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 CCDC102BQ68D86 513 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.35□□□□□ -2.03
COPB1-212ENST00000534771 BTLAQ7Z6A9 289 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 ZFPM1Q8IX07 1006 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 DIRC2Q96SL1 478 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 XYLT2Q9H1B5 865 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 CRIM1Q9NZV1 1036 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 FRRS1LQ9P0K9 344 aa2.35□□□□□ -2.03
COPB1-212ENST00000534771 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.35□□□□□ -2.03
COPB1-212ENST00000534771 OTOL1A6NHN0 477 aaPredicted RBP2.34□□□□□ -2.03
COPB1-212ENST00000534771 ETV2O00321 342 aaPredicted RBP2.34□□□□□ -2.03
COPB1-212ENST00000534771 CD8BP10966 210 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 NFKB1P19838 968 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 MAP4P27816 1152 aaKnown RBP2.34□□□□□ -2.03
COPB1-212ENST00000534771 ATP1A2P50993 1020 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 PLP2Q04941 152 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 POTEAQ6S8J7 498 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 BHLHA9Q7RTU4 235 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 TRIM50Q86XT4 487 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 ALDH16A1Q8IZ83 802 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 STK11IPQ8N1F8 1099 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 IL22RA1Q8N6P7 574 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 NFATC2IPQ8NCF5 419 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 TPCN2Q8NHX9 752 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 DCAF11Q8TEB1 546 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 TTC9Q92623 222 aa2.34□□□□□ -2.03
COPB1-212ENST00000534771 TSPAN10Q9H1Z9 355 aaPredicted RBP2.34□□□□□ -2.03
COPB1-212ENST00000534771 ATAD2Q6PL18 1390 aa2.34□□□□□ -2.04
COPB1-212ENST00000534771 M0R2N6 131 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 PPP1R12BO60237 982 aaPredicted RBP2.33□□□□□ -2.04
COPB1-212ENST00000534771 EPB42P16452 691 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 PREPP48147 710 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 NFKBIBQ15653 356 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 GDF6Q6KF10 455 aaPredicted RBP2.33□□□□□ -2.04
COPB1-212ENST00000534771 XKR5Q6UX68 686 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 KIAA1211Q6ZU35 1233 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 DHX32Q7L7V1 743 aaKnown RBP2.33□□□□□ -2.04
COPB1-212ENST00000534771 DEPDC4Q8N2C3 294 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 GAS2L2Q8NHY3 880 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 TRPM4Q8TD43 1214 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 SMG9Q9H0W8 520 aaKnown RBP2.33□□□□□ -2.04
COPB1-212ENST00000534771 ALG2Q9H553 416 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 C11orf16Q9NQ32 467 aa2.33□□□□□ -2.04
COPB1-212ENST00000534771 PALM3A6NDB9 673 aaPredicted RBP2.32□□□□□ -2.04
COPB1-212ENST00000534771 FAM170BA6NMN3 283 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 MATN3O15232 486 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 TRIM13O60858 407 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 MAP3K6O95382 1288 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 LMO1P25800 156 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 TARSP26639 723 aaKnown RBP2.32□□□□□ -2.04
COPB1-212ENST00000534771 ARID4AP29374 1257 aaPredicted RBP2.32□□□□□ -2.04
COPB1-212ENST00000534771 ADMP35318 185 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 FYB2Q5VWT5 728 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 IER5Q5VY09 327 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 HHIPL2Q6UWX4 724 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 MAP4K3Q8IVH8 894 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 WWC1Q8IX03 1113 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 ZDHHC14Q8IZN3 488 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 STAG2Q8N3U4 1231 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 LARGE2Q8N3Y3 721 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 GALNT11Q8NCW6 608 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 FLAD1Q8NFF5 587 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 NTN5Q8WTR8 489 aaPredicted RBP2.32□□□□□ -2.04
COPB1-212ENST00000534771 CHMP7Q8WUX9 453 aaPredicted RBP2.32□□□□□ -2.04
COPB1-212ENST00000534771 KCNN1Q92952 543 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 NGLY1Q96IV0 654 aa2.32□□□□□ -2.04
COPB1-212ENST00000534771 C2orf49Q9BVC5 232 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms