RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	ATP5J2-PTCD1	G3V325	749 aa		14.08	□□□□□ -0.16
SORBS3-222	ENST00000524057	CHRDL2	Q6WN34	429 aa		14.08	□□□□□ -0.16
SORBS3-222	ENST00000524057	ZNF333	Q96JL9	665 aa		14.08	□□□□□ -0.16
SORBS3-222	ENST00000524057	MXD3	Q9BW11	206 aa		14.08	□□□□□ -0.16
SORBS3-222	ENST00000524057	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	14.08	□□□□□ -0.16
SORBS3-222	ENST00000524057	TRIOBP	Q9H2D6	2365 aa		14.08	□□□□□ -0.16
SORBS3-222	ENST00000524057	IRS4	O14654	1257 aa	Predicted RBP	14.07	□□□□□ -0.16
SORBS3-222	ENST00000524057	NEFM	P07197	916 aa		14.07	□□□□□ -0.16
SORBS3-222	ENST00000524057	CRHR2	Q13324	411 aa		14.07	□□□□□ -0.16
SORBS3-222	ENST00000524057	NFE2L2	Q16236	605 aa		14.07	□□□□□ -0.16
SORBS3-222	ENST00000524057	RBM27	Q9P2N5	1060 aa	Known RBP	14.07	□□□□□ -0.16
SORBS3-222	ENST00000524057	ADAMTS8	Q9UP79	889 aa		14.07	□□□□□ -0.16
SORBS3-222	ENST00000524057	WTIP	A6NIX2	430 aa	Predicted RBP	14.06	□□□□□ -0.16
SORBS3-222	ENST00000524057	ZBTB48	P10074	688 aa	Predicted RBP	14.06	□□□□□ -0.16
SORBS3-222	ENST00000524057	SP3	Q02447	781 aa		14.06	□□□□□ -0.16
SORBS3-222	ENST00000524057	ANKRD13D	Q6ZTN6	518 aa		14.06	□□□□□ -0.16
SORBS3-222	ENST00000524057	OGFOD1	Q8N543	542 aa		14.06	□□□□□ -0.16
SORBS3-222	ENST00000524057	SASH1	O94885	1247 aa		14.05	□□□□□ -0.16
SORBS3-222	ENST00000524057	SLC4A8	Q2Y0W8	1093 aa		14.05	□□□□□ -0.16
SORBS3-222	ENST00000524057	DACT2	Q5SW24	774 aa		14.05	□□□□□ -0.16
SORBS3-222	ENST00000524057	NBPF11	Q86T75	865 aa		14.05	□□□□□ -0.16
SORBS3-222	ENST00000524057	PLBD2	Q8NHP8	589 aa		14.05	□□□□□ -0.16
SORBS3-222	ENST00000524057	WNK4	Q96J92	1243 aa		14.05	□□□□□ -0.16
SORBS3-222	ENST00000524057	CLMN	Q96JQ2	1002 aa		14.05	□□□□□ -0.16
SORBS3-222	ENST00000524057	PTPN18	Q99952	460 aa		14.05	□□□□□ -0.16
SORBS3-222	ENST00000524057	RANBP2	P49792	3224 aa	Known RBP	14.04	□□□□□ -0.16
SORBS3-222	ENST00000524057	DLG5	Q8TDM6	1919 aa		14.04	□□□□□ -0.16
SORBS3-222	ENST00000524057	MAP3K11	Q16584	847 aa		14.04	□□□□□ -0.16
SORBS3-222	ENST00000524057	CCDC146	Q8IYE0	955 aa		14.04	□□□□□ -0.16
SORBS3-222	ENST00000524057	CEP290	O15078	2479 aa		14.03	□□□□□ -0.16
SORBS3-222	ENST00000524057	COL6A3	P12111	3177 aa		14.03	□□□□□ -0.16
SORBS3-222	ENST00000524057	MYC	P01106	439 aa	Predicted RBP	14.03	□□□□□ -0.16
SORBS3-222	ENST00000524057	TRIM28	Q13263	835 aa	Known RBP	14.03	□□□□□ -0.16
SORBS3-222	ENST00000524057	SLC9C1	Q4G0N8	1177 aa		14.03	□□□□□ -0.16
SORBS3-222	ENST00000524057	OTUD7B	Q6GQQ9	843 aa		14.03	□□□□□ -0.16
SORBS3-222	ENST00000524057	APOBEC3F	Q8IUX4	373 aa	Known RBP	14.03	□□□□□ -0.16
SORBS3-222	ENST00000524057	PTCH2	Q9Y6C5	1203 aa		14.03	□□□□□ -0.16
SORBS3-222	ENST00000524057	XDH	P47989	1333 aa		14.02	□□□□□ -0.17
SORBS3-222	ENST00000524057	ATP2B4	P23634	1241 aa		14.02	□□□□□ -0.17
SORBS3-222	ENST00000524057	ZBED3	Q96IU2	234 aa	Predicted RBP	14.02	□□□□□ -0.17
SORBS3-222	ENST00000524057	DEFB129	Q9H1M3	183 aa		14.02	□□□□□ -0.17
SORBS3-222	ENST00000524057	BABAM1	Q9NWV8	329 aa		14.02	□□□□□ -0.17
SORBS3-222	ENST00000524057	CHPF2	Q9P2E5	772 aa		14.02	□□□□□ -0.17
SORBS3-222	ENST00000524057	PSME4	Q14997	1843 aa		14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	TESPA1	A2RU30	521 aa	Predicted RBP	14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	GJA5	P36382	358 aa		14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	MMP14	P50281	582 aa		14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	KRT24	Q2M2I5	525 aa		14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	STRIP1	Q5VSL9	837 aa		14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	DPF3	Q92784	378 aa		14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	FBXW7	Q969H0	707 aa		14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	PRO3102	Q9H379	93 aa		14.01	□□□□□ -0.17
SORBS3-222	ENST00000524057	MYO3B	Q8WXR4	1341 aa		14	□□□□□ -0.17
SORBS3-222	ENST00000524057	UNCX	A6NJT0	531 aa		14	□□□□□ -0.17
SORBS3-222	ENST00000524057	PPP1R12B	O60237	982 aa	Predicted RBP	14	□□□□□ -0.17
SORBS3-222	ENST00000524057	TMPO	P42166	694 aa	Known RBP	14	□□□□□ -0.17
SORBS3-222	ENST00000524057	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	14	□□□□□ -0.17
SORBS3-222	ENST00000524057	CCDC85A	Q96PX6	553 aa	Predicted RBP	14	□□□□□ -0.17
SORBS3-222	ENST00000524057	TRIM35	Q9UPQ4	493 aa		14	□□□□□ -0.17
SORBS3-222	ENST00000524057	ARHGEF6	Q15052	776 aa		13.99	□□□□□ -0.17
SORBS3-222	ENST00000524057	CCDC152	Q4G0S7	254 aa		13.99	□□□□□ -0.17
SORBS3-222	ENST00000524057	KIAA0825	Q8IV33	1275 aa		13.99	□□□□□ -0.17
SORBS3-222	ENST00000524057	SH3TC2	Q8TF17	1288 aa		13.99	□□□□□ -0.17
SORBS3-222	ENST00000524057	USP2	O75604	605 aa	Predicted RBP	13.98	□□□□□ -0.17
SORBS3-222	ENST00000524057	MNX1	P50219	401 aa	Predicted RBP	13.98	□□□□□ -0.17
SORBS3-222	ENST00000524057	RIPK4	P57078	832 aa		13.98	□□□□□ -0.17
SORBS3-222	ENST00000524057	TTLL5	Q6EMB2	1281 aa		13.98	□□□□□ -0.17
SORBS3-222	ENST00000524057	TXNRD3	Q86VQ6	643 aa		13.98	□□□□□ -0.17
SORBS3-222	ENST00000524057	ANKRD18A	Q8IVF6	992 aa		13.98	□□□□□ -0.17
SORBS3-222	ENST00000524057	JARID2	Q92833	1246 aa	Predicted RBP	13.98	□□□□□ -0.17
SORBS3-222	ENST00000524057	PDE8A	O60658	829 aa		13.97	□□□□□ -0.17
SORBS3-222	ENST00000524057	HSP90B1	P14625	803 aa	Known RBP	13.97	□□□□□ -0.17
SORBS3-222	ENST00000524057	RUNDC1	Q96C34	613 aa		13.97	□□□□□ -0.17
SORBS3-222	ENST00000524057	MS4A4A	Q96JQ5	239 aa		13.97	□□□□□ -0.17
SORBS3-222	ENST00000524057	COA1	Q9GZY4	146 aa		13.97	□□□□□ -0.17
SORBS3-222	ENST00000524057	MINPP1	Q9UNW1	487 aa		13.97	□□□□□ -0.17
SORBS3-222	ENST00000524057	MED23	Q9ULK4	1368 aa		13.96	□□□□□ -0.17
SORBS3-222	ENST00000524057	SSC5D	A1L4H1	1573 aa		13.96	□□□□□ -0.17
SORBS3-222	ENST00000524057	MAPK8IP3	Q9UPT6	1336 aa		13.96	□□□□□ -0.17
SORBS3-222	ENST00000524057	SUPT20HL1	Q3ZLR7	823 aa		13.96	□□□□□ -0.17
SORBS3-222	ENST00000524057	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.96	□□□□□ -0.17
SORBS3-222	ENST00000524057	PNN	Q9H307	717 aa	Known RBP	13.96	□□□□□ -0.17
SORBS3-222	ENST00000524057	DBF4	Q9UBU7	674 aa	Predicted RBP	13.96	□□□□□ -0.17
SORBS3-222	ENST00000524057	CHL1	O00533	1208 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	SOX1	O00570	391 aa	Predicted RBP	13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	ANP32C	O43423	234 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	IREB2	P48200	963 aa	Known RBP	13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	CCT4	P50991	539 aa	Known RBP	13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	DLGAP5	Q15398	846 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	HDGFL1	Q5TGJ6	251 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	ANKRD13A	Q8IZ07	590 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	SHISA4	Q96DD7	197 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	ZFYVE28	Q9HCC9	887 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	PCDHAC2	Q9Y5I4	1007 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	PPP2R3B	Q9Y5P8	575 aa		13.95	□□□□□ -0.18
SORBS3-222	ENST00000524057	CUL9	Q8IWT3	2517 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	APAF1	O14727	1248 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	PCCA	P05165	728 aa	Predicted RBP	13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	GTF2I	P78347	998 aa		13.94	□□□□□ -0.18
SORBS3-222	ENST00000524057	WDR43	Q15061	677 aa	Known RBP eCLIP	13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms