RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 ZNF408Q9H9D4 720 aa21.72■■□□□ 1.07
CCNC-213ENST00000523541 HDAC5Q9UQL6 1122 aa21.72■■□□□ 1.07
CCNC-213ENST00000523541 RARSP54136 660 aaKnown RBP21.71■■□□□ 1.07
CCNC-213ENST00000523541 GRM1Q13255 1194 aa21.71■■□□□ 1.07
CCNC-213ENST00000523541 KAZALD1Q96I82 304 aa21.71■■□□□ 1.07
CCNC-213ENST00000523541 GLIS2Q9BZE0 524 aaPredicted RBP21.71■■□□□ 1.07
CCNC-213ENST00000523541 USP44Q9H0E7 712 aa21.71■■□□□ 1.07
CCNC-213ENST00000523541 STRIP1Q5VSL9 837 aa21.7■■□□□ 1.06
CCNC-213ENST00000523541 SUCLG2Q96I99 432 aa21.7■■□□□ 1.06
CCNC-213ENST00000523541 VEGFBP49765 207 aa21.69■■□□□ 1.06
CCNC-213ENST00000523541 HIRAP54198 1017 aaPredicted RBP21.69■■□□□ 1.06
CCNC-213ENST00000523541 CDC37L1Q7L3B6 337 aa21.69■■□□□ 1.06
CCNC-213ENST00000523541 CNNM1Q9NRU3 951 aa21.69■■□□□ 1.06
CCNC-213ENST00000523541 NOB1Q9ULX3 412 aaKnown RBP21.69■■□□□ 1.06
CCNC-213ENST00000523541 MYO3BQ8WXR4 1341 aa21.69■■□□□ 1.06
CCNC-213ENST00000523541 CELF2O95319 508 aaKnown RBP21.68■■□□□ 1.06
CCNC-213ENST00000523541 ZNF280AP59817 542 aaPredicted RBP21.68■■□□□ 1.06
CCNC-213ENST00000523541 GMLQ99445 158 aa21.68■■□□□ 1.06
CCNC-213ENST00000523541 KIF16BQ96L93 1317 aa21.68■■□□□ 1.06
CCNC-213ENST00000523541 WTIPA6NIX2 430 aaPredicted RBP21.67■■□□□ 1.06
CCNC-213ENST00000523541 IPO8O15397 1037 aaKnown RBP21.67■■□□□ 1.06
CCNC-213ENST00000523541 KIF4BQ2VIQ3 1234 aa21.67■■□□□ 1.06
CCNC-213ENST00000523541 AIDAQ96BJ3 306 aa21.67■■□□□ 1.06
CCNC-213ENST00000523541 DCPSQ96C86 337 aaKnown RBP21.67■■□□□ 1.06
CCNC-213ENST00000523541 BICC1Q9H694 974 aaKnown RBP21.67■■□□□ 1.06
CCNC-213ENST00000523541 PCNTO95613 3336 aa21.67■■□□□ 1.06
CCNC-213ENST00000523541 RASSF10A6NK89 507 aa21.66■■□□□ 1.06
CCNC-213ENST00000523541 USP17L8P0C7I0 530 aa21.66■■□□□ 1.06
CCNC-213ENST00000523541 HNRNPUQ00839 825 aaKnown RBP eCLIP21.66■■□□□ 1.06
CCNC-213ENST00000523541 USP48Q86UV5 1035 aa21.66■■□□□ 1.06
CCNC-213ENST00000523541 TRPM7Q96QT4 1865 aa21.65■■□□□ 1.06
CCNC-213ENST00000523541 MROH5Q6ZUA9 1318 aa21.65■■□□□ 1.06
CCNC-213ENST00000523541 UBE4AQ14139 1066 aa21.65■■□□□ 1.06
CCNC-213ENST00000523541 DACT2Q5SW24 774 aa21.65■■□□□ 1.06
CCNC-213ENST00000523541 TXNRD3Q86VQ6 643 aa21.65■■□□□ 1.06
CCNC-213ENST00000523541 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
CCNC-213ENST00000523541 SCN9AQ15858 1988 aa21.65■■□□□ 1.06
CCNC-213ENST00000523541 PLIN1O60240 522 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 TAF5LO75529 589 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 ECE1P42892 770 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 IFFO2Q5TF58 517 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 CST9Q5W186 159 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 TTLL5Q6EMB2 1281 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 KRT26Q7Z3Y9 468 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 OGFOD1Q8N543 542 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 ANKRD44Q8N8A2 993 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 CD209Q9NNX6 404 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 RIPOR2Q9Y4F9 1068 aa21.64■■□□□ 1.05
CCNC-213ENST00000523541 WDR33Q9C0J8 1336 aaKnown RBP21.63■■□□□ 1.05
CCNC-213ENST00000523541 IRS2Q9Y4H2 1338 aa21.63■■□□□ 1.05
CCNC-213ENST00000523541 EGFRP00533 1210 aa21.63■■□□□ 1.05
CCNC-213ENST00000523541 ZNF804AQ7Z570 1209 aa21.63■■□□□ 1.05
CCNC-213ENST00000523541 HELBQ8NG08 1087 aaPredicted RBP21.63■■□□□ 1.05
CCNC-213ENST00000523541 IL1R1P14778 569 aa21.62■■□□□ 1.05
CCNC-213ENST00000523541 INTS3Q68E01 1043 aaKnown RBP21.62■■□□□ 1.05
CCNC-213ENST00000523541 SULF1Q8IWU6 871 aa21.62■■□□□ 1.05
CCNC-213ENST00000523541 CAPNS2Q96L46 248 aa21.62■■□□□ 1.05
CCNC-213ENST00000523541 GGA3Q9NZ52 723 aa21.62■■□□□ 1.05
CCNC-213ENST00000523541 TLL2Q9Y6L7 1015 aa21.62■■□□□ 1.05
CCNC-213ENST00000523541 UBTFL1P0CB47 393 aaPredicted RBP21.61■■□□□ 1.05
CCNC-213ENST00000523541 FKBP1AP62942 108 aaKnown RBP21.61■■□□□ 1.05
CCNC-213ENST00000523541 COL13A1Q5TAT6 717 aaPredicted RBP21.61■■□□□ 1.05
CCNC-213ENST00000523541 CYP4F22Q6NT55 531 aa21.61■■□□□ 1.05
CCNC-213ENST00000523541 HHIPL1Q96JK4 782 aa21.61■■□□□ 1.05
CCNC-213ENST00000523541 MYOZ2Q9NPC6 264 aa21.61■■□□□ 1.05
CCNC-213ENST00000523541 FBXO3Q9UK99 471 aa21.61■■□□□ 1.05
CCNC-213ENST00000523541 ADM5C9JUS6 153 aa21.6■■□□□ 1.05
CCNC-213ENST00000523541 KLRK1P26718 216 aa21.6■■□□□ 1.05
CCNC-213ENST00000523541 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
CCNC-213ENST00000523541 SASH1O94885 1247 aa21.59■■□□□ 1.05
CCNC-213ENST00000523541 SCARF1Q14162 830 aa21.59■■□□□ 1.05
CCNC-213ENST00000523541 BEGAINQ9BUH8 593 aa21.59■■□□□ 1.05
CCNC-213ENST00000523541 MXD3Q9BW11 206 aa21.59■■□□□ 1.05
CCNC-213ENST00000523541 HDAC9Q9UKV0 1011 aa21.59■■□□□ 1.05
CCNC-213ENST00000523541 PITPNM2Q9BZ72 1349 aa21.58■■□□□ 1.05
CCNC-213ENST00000523541 PSME4Q14997 1843 aa21.58■■□□□ 1.05
CCNC-213ENST00000523541 GNAI3P08754 354 aa21.58■■□□□ 1.05
CCNC-213ENST00000523541 GTF2IP78347 998 aa21.58■■□□□ 1.05
CCNC-213ENST00000523541 ANGEL2Q5VTE6 544 aaKnown RBP21.58■■□□□ 1.05
CCNC-213ENST00000523541 DLK2Q6UY11 383 aa21.58■■□□□ 1.05
CCNC-213ENST00000523541 ATF7IPQ6VMQ6 1270 aa21.58■■□□□ 1.05
CCNC-213ENST00000523541 TNS4Q8IZW8 715 aa21.58■■□□□ 1.05
CCNC-213ENST00000523541 PUS3Q9BZE2 481 aaKnown RBP21.58■■□□□ 1.05
CCNC-213ENST00000523541 SNAP23O00161 211 aa21.57■■□□□ 1.04
CCNC-213ENST00000523541 FOXN1O15353 648 aa21.57■■□□□ 1.04
CCNC-213ENST00000523541 PDE8BO95263 885 aa21.57■■□□□ 1.04
CCNC-213ENST00000523541 MAP2K1Q02750 393 aaPredicted RBP21.57■■□□□ 1.04
CCNC-213ENST00000523541 SAPCD2Q86UD0 394 aa21.57■■□□□ 1.04
CCNC-213ENST00000523541 C2orf69Q8N8R5 385 aa21.57■■□□□ 1.04
CCNC-213ENST00000523541 ASTN2O75129 1339 aaPredicted RBP21.56■■□□□ 1.04
CCNC-213ENST00000523541 HIBADHP31937 336 aaKnown RBP21.56■■□□□ 1.04
CCNC-213ENST00000523541 HUNKP57058 714 aa21.56■■□□□ 1.04
CCNC-213ENST00000523541 METTL24Q5JXM2 366 aa21.56■■□□□ 1.04
CCNC-213ENST00000523541 RFX5P48382 616 aaPredicted RBP21.55■■□□□ 1.04
CCNC-213ENST00000523541 CTCFP49711 727 aaPredicted RBP21.55■■□□□ 1.04
CCNC-213ENST00000523541 PTPN12Q05209 780 aaKnown RBP21.55■■□□□ 1.04
CCNC-213ENST00000523541 LRRC24Q50LG9 513 aa21.55■■□□□ 1.04
CCNC-213ENST00000523541 KIAA0825Q8IV33 1275 aa21.55■■□□□ 1.04
CCNC-213ENST00000523541 TDRD7Q8NHU6 1098 aaKnown RBP21.55■■□□□ 1.04
CCNC-213ENST00000523541 FAM84BQ96KN1 310 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms