RNA–Protein interactions for RNA: ENST00000522878.5

ARFGEF1-208, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARFGEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-208ENST00000522878 FAM109BQ6ICB4 259 aaPredicted RBP7.55□□□□□ -1.2
ARFGEF1-208ENST00000522878 WWC1Q8IX03 1113 aa7.55□□□□□ -1.2
ARFGEF1-208ENST00000522878 PIGBQ92521 554 aa7.55□□□□□ -1.2
ARFGEF1-208ENST00000522878 CDK19Q9BWU1 502 aa7.55□□□□□ -1.2
ARFGEF1-208ENST00000522878 PTPN22Q9Y2R2 807 aa7.55□□□□□ -1.2
ARFGEF1-208ENST00000522878 CACNA1HO95180 2353 aa7.55□□□□□ -1.2
ARFGEF1-208ENST00000522878 USP24Q9UPU5 2620 aa7.55□□□□□ -1.2
ARFGEF1-208ENST00000522878 TAF1P21675 1872 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 DMXL1Q9Y485 3027 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 TBC1D12O60347 775 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 RPS6KA4O75676 772 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 HMGB1P09429 215 aaKnown RBP7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 DLK2Q6UY11 383 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 PROCA1Q8NCQ7 364 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 WNT2BQ93097 391 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 CFHR5Q9BXR6 569 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 GPCPD1Q9NPB8 672 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 ZSWIM8A7E2V4 1837 aa7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 ZFHX2Q9C0A1 2572 aaPredicted RBP7.54□□□□□ -1.2
ARFGEF1-208ENST00000522878 CNTNAP4Q9C0A0 1308 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 VPS13AQ96RL7 3174 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 GOLGA8CPA6NN73 597 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 E9PSI1 815 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 H0YIN7 160 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 ATP6V1AP38606 617 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 PTGDRQ13258 359 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 MAP3K11Q16584 847 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 RGL3Q3MIN7 710 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 RC3H1Q5TC82 1133 aaKnown RBP7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 Q6ZNB5 142 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 ZNF454Q8N9F8 522 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 SLC4A9Q96Q91 983 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 POLR3EQ9NVU0 708 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 NR2E3Q9Y5X4 410 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 CD163L1Q9NR16 1453 aa7.53□□□□□ -1.2
ARFGEF1-208ENST00000522878 LMOD1P29536 600 aaPredicted RBP7.52□□□□□ -1.21
ARFGEF1-208ENST00000522878 SSTR3P32745 418 aaPredicted RBP7.52□□□□□ -1.21
ARFGEF1-208ENST00000522878 MDM2Q00987 491 aaPredicted RBP7.52□□□□□ -1.21
ARFGEF1-208ENST00000522878 CAP1Q01518 475 aa7.52□□□□□ -1.21
ARFGEF1-208ENST00000522878 RASAL3Q86YV0 1011 aa7.52□□□□□ -1.21
ARFGEF1-208ENST00000522878 BANK1Q8NDB2 785 aa7.52□□□□□ -1.21
ARFGEF1-208ENST00000522878 DDX12PQ92771 950 aa7.52□□□□□ -1.21
ARFGEF1-208ENST00000522878 ZNF277Q9NRM2 450 aaPredicted RBP7.52□□□□□ -1.21
ARFGEF1-208ENST00000522878 BHMG1C9JSJ3 638 aaPredicted RBP7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 IGSF3O75054 1194 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 MRPL50Q8N5N7 158 aaKnown RBP7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 C7orf43Q8WVR3 580 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 ZNF428Q96B54 188 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 FAM161BQ96MY7 647 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 CDX2Q99626 313 aaPredicted RBP7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 TMUB1Q9BVT8 246 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 SLC4A5Q9BY07 1137 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 BCL2L12Q9HB09 334 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 GBA2Q9HCG7 927 aaPredicted RBP7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 ASAP1Q9ULH1 1129 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 SNED1Q8TER0 1413 aa7.51□□□□□ -1.21
ARFGEF1-208ENST00000522878 COL9A2Q14055 689 aaPredicted RBP7.5□□□□□ -1.21
ARFGEF1-208ENST00000522878 USP38Q8NB14 1042 aa7.5□□□□□ -1.21
ARFGEF1-208ENST00000522878 ADAMTS19Q8TE59 1207 aa7.5□□□□□ -1.21
ARFGEF1-208ENST00000522878 CALR3Q96L12 384 aaKnown RBP7.5□□□□□ -1.21
ARFGEF1-208ENST00000522878 MAP3K19Q56UN5 1328 aa7.5□□□□□ -1.21
ARFGEF1-208ENST00000522878 NHLH1Q02575 133 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 NFIXQ14938 502 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 SLC4A8Q2Y0W8 1093 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 PRPF40BQ6NWY9 871 aaKnown RBP7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 TDHQ8IZJ6 230 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 ZNF622Q969S3 477 aaKnown RBP eCLIP7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 ZBED2Q9BTP6 218 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 HTATIP2Q9BUP3 242 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 C11orf16Q9NQ32 467 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 SNRKQ9NRH2 765 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 ADARB2Q9NS39 739 aaKnown RBP7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 GJA3Q9Y6H8 435 aa7.49□□□□□ -1.21
ARFGEF1-208ENST00000522878 ASPMQ8IZT6 3477 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 SPTBN2O15020 2390 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 DMDP11532 3685 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 ZFYVE26Q68DK2 2539 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 GVINP1Q7Z2Y8 2422 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 PTPREP23469 700 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 HIRAP54198 1017 aaPredicted RBP7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 FKBP4Q02790 459 aaKnown RBP eCLIP7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 SOGA3Q5TF21 947 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 CDC37L1Q7L3B6 337 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 SAMD7Q7Z3H4 446 aa7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 GCN1Q92616 2671 aaKnown RBP7.48□□□□□ -1.21
ARFGEF1-208ENST00000522878 CHD7Q9P2D1 2997 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 USP9XQ93008 2570 aaPredicted RBP7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 CYP27B1O15528 508 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 IARSP41252 1262 aaKnown RBP7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 TM4SF4P48230 202 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 KCNA1Q09470 495 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 TMEM259Q4ZIN3 620 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 TRPM4Q8TD43 1214 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 UHRF1Q96T88 793 aaPredicted RBP7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 EPHX3Q9H6B9 360 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 PRM3Q9NNZ6 103 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 GPRC5DQ9NZD1 345 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 BRWD1Q9NSI6 2320 aa7.47□□□□□ -1.21
ARFGEF1-208ENST00000522878 TTC21BQ7Z4L5 1316 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms