RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 ZNF211Q13398 564 aaPredicted RBP9.22□□□□□ -0.93
LINC00535-204ENST00000520513 PRSS36Q5K4E3 855 aa9.22□□□□□ -0.93
LINC00535-204ENST00000520513 DCAF11Q8TEB1 546 aa9.22□□□□□ -0.93
LINC00535-204ENST00000520513 PBX4Q9BYU1 374 aa9.22□□□□□ -0.93
LINC00535-204ENST00000520513 SH2B1Q9NRF2 756 aaPredicted RBP9.22□□□□□ -0.93
LINC00535-204ENST00000520513 KCNK4Q9NYG8 393 aa9.22□□□□□ -0.93
LINC00535-204ENST00000520513 WISP1O95388 367 aa9.21□□□□□ -0.94
LINC00535-204ENST00000520513 EPHA1P21709 976 aa9.21□□□□□ -0.94
LINC00535-204ENST00000520513 CDC25BP30305 580 aa9.21□□□□□ -0.94
LINC00535-204ENST00000520513 ECM1Q16610 540 aa9.21□□□□□ -0.94
LINC00535-204ENST00000520513 C8orf34Q49A92 452 aa9.21□□□□□ -0.94
LINC00535-204ENST00000520513 B4GALNT3Q6L9W6 998 aa9.21□□□□□ -0.94
LINC00535-204ENST00000520513 PPME1Q9Y570 386 aa9.21□□□□□ -0.94
LINC00535-204ENST00000520513 NCAPG2Q86XI2 1143 aa9.2□□□□□ -0.94
LINC00535-204ENST00000520513 MAP4K3Q8IVH8 894 aa9.2□□□□□ -0.94
LINC00535-204ENST00000520513 AGGF1Q8N302 714 aaeCLIP9.2□□□□□ -0.94
LINC00535-204ENST00000520513 CCDC87Q9NVE4 849 aa9.2□□□□□ -0.94
LINC00535-204ENST00000520513 F8W735 103 aaPredicted RBP9.19□□□□□ -0.94
LINC00535-204ENST00000520513 KCNA1Q09470 495 aa9.19□□□□□ -0.94
LINC00535-204ENST00000520513 SPACA7Q96KW9 195 aa9.19□□□□□ -0.94
LINC00535-204ENST00000520513 CARD10Q9BWT7 1032 aa9.19□□□□□ -0.94
LINC00535-204ENST00000520513 FOXD3Q9UJU5 478 aaPredicted RBP9.19□□□□□ -0.94
LINC00535-204ENST00000520513 SMNDC1O75940 238 aaKnown RBP eCLIP9.18□□□□□ -0.94
LINC00535-204ENST00000520513 CDC27P30260 824 aa9.18□□□□□ -0.94
LINC00535-204ENST00000520513 AEBP1Q8IUX7 1158 aa9.18□□□□□ -0.94
LINC00535-204ENST00000520513 TMEM130Q8N3G9 435 aa9.18□□□□□ -0.94
LINC00535-204ENST00000520513 MUC3BQ9H195 1237 aa9.18□□□□□ -0.94
LINC00535-204ENST00000520513 DZANK1Q9NVP4 752 aa9.18□□□□□ -0.94
LINC00535-204ENST00000520513 EREGO14944 169 aa9.17□□□□□ -0.94
LINC00535-204ENST00000520513 ABL1P00519 1130 aa9.17□□□□□ -0.94
LINC00535-204ENST00000520513 CES1P23141 567 aa9.17□□□□□ -0.94
LINC00535-204ENST00000520513 FKBP4Q02790 459 aaKnown RBP eCLIP9.17□□□□□ -0.94
LINC00535-204ENST00000520513 Q6ZS46 218 aa9.17□□□□□ -0.94
LINC00535-204ENST00000520513 DZIP1LQ8IYY4 767 aaKnown RBP9.17□□□□□ -0.94
LINC00535-204ENST00000520513 ADAM19Q9H013 955 aa9.17□□□□□ -0.94
LINC00535-204ENST00000520513 MRPL18Q9H0U6 180 aaKnown RBP9.17□□□□□ -0.94
LINC00535-204ENST00000520513 AKTIPQ9H8T0 292 aa9.17□□□□□ -0.94
LINC00535-204ENST00000520513 DDX3YO15523 660 aaKnown RBP9.16□□□□□ -0.94
LINC00535-204ENST00000520513 ADAM11O75078 769 aa9.16□□□□□ -0.94
LINC00535-204ENST00000520513 TNFRSF21O75509 655 aa9.16□□□□□ -0.94
LINC00535-204ENST00000520513 RPLP1P05386 114 aaKnown RBP9.16□□□□□ -0.94
LINC00535-204ENST00000520513 SERPINB4P48594 390 aa9.16□□□□□ -0.94
LINC00535-204ENST00000520513 HGSNATQ68CP4 663 aa9.16□□□□□ -0.94
LINC00535-204ENST00000520513 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.16□□□□□ -0.94
LINC00535-204ENST00000520513 FSCN2O14926 492 aa9.15□□□□□ -0.94
LINC00535-204ENST00000520513 FAM13AO94988 1023 aa9.15□□□□□ -0.94
LINC00535-204ENST00000520513 ALKBH2Q6NS38 261 aa9.15□□□□□ -0.94
LINC00535-204ENST00000520513 FOXD4L4Q8WXT5 416 aaPredicted RBP9.15□□□□□ -0.94
LINC00535-204ENST00000520513 SF3B2Q13435 895 aaKnown RBP9.14□□□□□ -0.95
LINC00535-204ENST00000520513 GJD3Q8N144 294 aa9.14□□□□□ -0.95
LINC00535-204ENST00000520513 KLHDC7BQ96G42 594 aa9.14□□□□□ -0.95
LINC00535-204ENST00000520513 UBL7Q96S82 380 aaPredicted RBP9.14□□□□□ -0.95
LINC00535-204ENST00000520513 LATS2Q9NRM7 1088 aa9.14□□□□□ -0.95
LINC00535-204ENST00000520513 SCO2A0A1W2PP80 73 aa9.13□□□□□ -0.95
LINC00535-204ENST00000520513 PCSK2P16519 638 aa9.13□□□□□ -0.95
LINC00535-204ENST00000520513 PTPRAP18433 802 aa9.13□□□□□ -0.95
LINC00535-204ENST00000520513 CD68P34810 354 aaPredicted RBP9.13□□□□□ -0.95
LINC00535-204ENST00000520513 AAMPQ13685 434 aa9.13□□□□□ -0.95
LINC00535-204ENST00000520513 PEAR1Q5VY43 1037 aaPredicted RBP9.13□□□□□ -0.95
LINC00535-204ENST00000520513 KIAA1211Q6ZU35 1233 aa9.13□□□□□ -0.95
LINC00535-204ENST00000520513 ZKSCAN3Q9BRR0 538 aa9.13□□□□□ -0.95
LINC00535-204ENST00000520513 PDE2AO00408 941 aaPredicted RBP9.12□□□□□ -0.95
LINC00535-204ENST00000520513 ICMTO60725 284 aa9.12□□□□□ -0.95
LINC00535-204ENST00000520513 UBASH3BQ8TF42 649 aa9.12□□□□□ -0.95
LINC00535-204ENST00000520513 SOX13Q9UN79 622 aa9.12□□□□□ -0.95
LINC00535-204ENST00000520513 PRR23CQ6ZRP0 262 aa9.11□□□□□ -0.95
LINC00535-204ENST00000520513 NXPE3Q969Y0 559 aa9.11□□□□□ -0.95
LINC00535-204ENST00000520513 OSMRQ99650 979 aa9.11□□□□□ -0.95
LINC00535-204ENST00000520513 CCDC9Q9Y3X0 531 aaKnown RBP9.11□□□□□ -0.95
LINC00535-204ENST00000520513 PHACTR2O75167 634 aa9.1□□□□□ -0.95
LINC00535-204ENST00000520513 POLR3DP05423 398 aaPredicted RBP9.1□□□□□ -0.95
LINC00535-204ENST00000520513 ARHGAP4P98171 946 aa9.1□□□□□ -0.95
LINC00535-204ENST00000520513 ACAD11Q709F0 780 aa9.1□□□□□ -0.95
LINC00535-204ENST00000520513 TMEM102Q8N9M5 508 aaPredicted RBP9.1□□□□□ -0.95
LINC00535-204ENST00000520513 SNX29Q8TEQ0 813 aa9.1□□□□□ -0.95
LINC00535-204ENST00000520513 H3BRJ5 948 aa9.09□□□□□ -0.95
LINC00535-204ENST00000520513 GLB1P16278 677 aa9.09□□□□□ -0.95
LINC00535-204ENST00000520513 ARTNQ5T4W7 220 aa9.09□□□□□ -0.95
LINC00535-204ENST00000520513 VN1R5Q7Z5H4 357 aa9.09□□□□□ -0.95
LINC00535-204ENST00000520513 ARMC10Q8N2F6 343 aa9.09□□□□□ -0.95
LINC00535-204ENST00000520513 EGFL7Q9UHF1 273 aa9.09□□□□□ -0.95
LINC00535-204ENST00000520513 H3BRB1 525 aa9.08□□□□□ -0.96
LINC00535-204ENST00000520513 TXNDC2Q86VQ3 553 aa9.08□□□□□ -0.96
LINC00535-204ENST00000520513 KLHL23Q8NBE8 558 aa9.08□□□□□ -0.96
LINC00535-204ENST00000520513 TTC16Q8NEE8 873 aa9.08□□□□□ -0.96
LINC00535-204ENST00000520513 TUT1Q9H6E5 874 aaKnown RBP9.08□□□□□ -0.96
LINC00535-204ENST00000520513 ZFYVE28Q9HCC9 887 aa9.08□□□□□ -0.96
LINC00535-204ENST00000520513 ZFP64Q9NPA5 681 aa9.08□□□□□ -0.96
LINC00535-204ENST00000520513 SEC31BQ9NQW1 1179 aa9.08□□□□□ -0.96
LINC00535-204ENST00000520513 MTMR7Q9Y216 660 aa9.08□□□□□ -0.96
LINC00535-204ENST00000520513 FAM177BA6PVY3 158 aa9.07□□□□□ -0.96
LINC00535-204ENST00000520513 METTL12A8MUP2 240 aa9.07□□□□□ -0.96
LINC00535-204ENST00000520513 SOX1O00570 391 aaPredicted RBP9.07□□□□□ -0.96
LINC00535-204ENST00000520513 LRP8Q14114 963 aa9.07□□□□□ -0.96
LINC00535-204ENST00000520513 USPL1Q5W0Q7 1092 aa9.07□□□□□ -0.96
LINC00535-204ENST00000520513 FAM117BQ6P1L5 589 aa9.07□□□□□ -0.96
LINC00535-204ENST00000520513 PMEPA1Q969W9 287 aa9.07□□□□□ -0.96
LINC00535-204ENST00000520513 GNEQ9Y223 722 aaKnown RBP9.07□□□□□ -0.96
LINC00535-204ENST00000520513 USP5P45974 858 aa9.06□□□□□ -0.96
LINC00535-204ENST00000520513 IGHA2P01877 340 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms