RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
SH2D4A-202ENST00000518040 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
SH2D4A-202ENST00000518040 PROSER3Q2NL68 480 aa12.9□□□□□ -0.34
SH2D4A-202ENST00000518040 SPRYD7Q5W111 196 aa12.9□□□□□ -0.34
SH2D4A-202ENST00000518040 USP17L1Q7RTZ2 530 aa12.9□□□□□ -0.34
SH2D4A-202ENST00000518040 DLG5Q8TDM6 1919 aa12.9□□□□□ -0.34
SH2D4A-202ENST00000518040 PSME4Q14997 1843 aa12.9□□□□□ -0.35
SH2D4A-202ENST00000518040 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 OTUD7BQ6GQQ9 843 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 IFNL1Q8IU54 200 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 R3HDMLQ9H3Y0 253 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 MYO3BQ8WXR4 1341 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 UNCXA6NJT0 531 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 ANXA1P04083 346 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 EN2P19622 333 aaPredicted RBP12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 PTPN12Q05209 780 aaKnown RBP12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 ARHGEF6Q15052 776 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 LDLRAD1Q5T700 205 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 FAM89AQ96GI7 184 aa12.89□□□□□ -0.35
SH2D4A-202ENST00000518040 DLL1O00548 723 aa12.88□□□□□ -0.35
SH2D4A-202ENST00000518040 NBPF11Q86T75 865 aa12.88□□□□□ -0.35
SH2D4A-202ENST00000518040 APOBEC3FQ8IUX4 373 aaKnown RBP12.88□□□□□ -0.35
SH2D4A-202ENST00000518040 PLBD2Q8NHP8 589 aa12.88□□□□□ -0.35
SH2D4A-202ENST00000518040 ISCA1Q9BUE6 129 aa12.88□□□□□ -0.35
SH2D4A-202ENST00000518040 EFCC1Q9HA90 598 aa12.88□□□□□ -0.35
SH2D4A-202ENST00000518040 KIAA0100Q14667 2235 aaKnown RBP12.87□□□□□ -0.35
SH2D4A-202ENST00000518040 NBPF9Q3BBW0 867 aa12.87□□□□□ -0.35
SH2D4A-202ENST00000518040 PRAMEF18Q5VWM3 479 aa12.87□□□□□ -0.35
SH2D4A-202ENST00000518040 SLC10A4Q96EP9 437 aa12.87□□□□□ -0.35
SH2D4A-202ENST00000518040 MAPK8IP3Q9UPT6 1336 aa12.87□□□□□ -0.35
SH2D4A-202ENST00000518040 WNT10BO00744 389 aa12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 IRS4O14654 1257 aaPredicted RBP12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 XDHP47989 1333 aa12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 HTTP42858 3142 aa12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 COL1A1P02452 1464 aaPredicted RBP12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 TRIM28Q13263 835 aaKnown RBP12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 ANGEL1Q9UNK9 670 aaKnown RBP12.86□□□□□ -0.35
SH2D4A-202ENST00000518040 GABBR2O75899 941 aa12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 SP3Q02447 781 aa12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 MAP3K11Q16584 847 aa12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 CCDC152Q4G0S7 254 aa12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 SLC17A8Q8NDX2 589 aa12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 OTUD5Q96G74 571 aa12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 ZNF333Q96JL9 665 aa12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 PCGF6Q9BYE7 350 aa12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 SCAF8Q9UPN6 1271 aaKnown RBP12.85□□□□□ -0.35
SH2D4A-202ENST00000518040 PPP1R12BO60237 982 aaPredicted RBP12.84□□□□□ -0.35
SH2D4A-202ENST00000518040 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
SH2D4A-202ENST00000518040 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
SH2D4A-202ENST00000518040 PRKG1Q13976 671 aa12.83□□□□□ -0.35
SH2D4A-202ENST00000518040 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.35
SH2D4A-202ENST00000518040 STRIP1Q5VSL9 837 aa12.83□□□□□ -0.35
SH2D4A-202ENST00000518040 WNK4Q96J92 1243 aa12.83□□□□□ -0.35
SH2D4A-202ENST00000518040 LAMB1P07942 1786 aa12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 H0YGN5 161 aa12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 IGF2BP3O00425 579 aaKnown RBP eCLIP12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 LMOD3Q0VAK6 560 aa12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 SLC9C1Q4G0N8 1177 aa12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 DACT2Q5SW24 774 aa12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 ZBTB38Q8NAP3 1195 aaPredicted RBP12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 PPP2R3BQ9Y5P8 575 aa12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 MED23Q9ULK4 1368 aa12.83□□□□□ -0.36
SH2D4A-202ENST00000518040 CENPFP49454 3210 aa12.82□□□□□ -0.36
SH2D4A-202ENST00000518040 CRHR2Q13324 411 aa12.82□□□□□ -0.36
SH2D4A-202ENST00000518040 ANKRD18AQ8IVF6 992 aa12.82□□□□□ -0.36
SH2D4A-202ENST00000518040 SEC31BQ9NQW1 1179 aa12.82□□□□□ -0.36
SH2D4A-202ENST00000518040 DBF4Q9UBU7 674 aaPredicted RBP12.82□□□□□ -0.36
SH2D4A-202ENST00000518040 COL4A1P02462 1669 aa12.82□□□□□ -0.36
SH2D4A-202ENST00000518040 HOXB7P09629 217 aa12.81□□□□□ -0.36
SH2D4A-202ENST00000518040 BRCA2P51587 3418 aa12.81□□□□□ -0.36
SH2D4A-202ENST00000518040 RTL5Q5HYW3 569 aaPredicted RBP12.81□□□□□ -0.36
SH2D4A-202ENST00000518040 COA1Q9GZY4 146 aa12.81□□□□□ -0.36
SH2D4A-202ENST00000518040 HYPKQ9NX55 129 aa12.81□□□□□ -0.36
SH2D4A-202ENST00000518040 CHPF2Q9P2E5 772 aa12.81□□□□□ -0.36
SH2D4A-202ENST00000518040 PDE8AO60658 829 aa12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 SASH1O94885 1247 aa12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 SUPT20HL1Q3ZLR7 823 aa12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 ZNF428Q96B54 188 aa12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 TRIOBPQ9H2D6 2365 aa12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 TESPA1A2RU30 521 aaPredicted RBP12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 IREB2P48200 963 aaKnown RBP12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 RIPK4P57078 832 aa12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 HDGFL1Q5TGJ6 251 aa12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 CDC5LQ99459 802 aaKnown RBP12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 DEFB129Q9H1M3 183 aa12.8□□□□□ -0.36
SH2D4A-202ENST00000518040 FBXW7Q969H0 707 aa12.79□□□□□ -0.36
SH2D4A-202ENST00000518040 ZBED3Q96IU2 234 aaPredicted RBP12.79□□□□□ -0.36
SH2D4A-202ENST00000518040 WDHD1O75717 1129 aaPredicted RBP12.78□□□□□ -0.36
SH2D4A-202ENST00000518040 PCCAP05165 728 aaPredicted RBP12.78□□□□□ -0.36
SH2D4A-202ENST00000518040 TTLL5Q6EMB2 1281 aa12.78□□□□□ -0.36
SH2D4A-202ENST00000518040 ANKRD13AQ8IZ07 590 aa12.78□□□□□ -0.36
SH2D4A-202ENST00000518040 CCDC191Q8NCU4 936 aa12.78□□□□□ -0.36
SH2D4A-202ENST00000518040 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
SH2D4A-202ENST00000518040 PTCH2Q9Y6C5 1203 aa12.78□□□□□ -0.36
SH2D4A-202ENST00000518040 SZT2Q5T011 3432 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms