RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 SAGE1Q9NXZ1 904 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
PVT1-206ENST00000517838 HCLS1P14317 486 aaPredicted RBP9.53□□□□□ -0.88
PVT1-206ENST00000517838 PARP10Q53GL7 1025 aa9.53□□□□□ -0.88
PVT1-206ENST00000517838 PRPF38BQ5VTL8 546 aaKnown RBP9.53□□□□□ -0.88
PVT1-206ENST00000517838 KRT26Q7Z3Y9 468 aa9.53□□□□□ -0.88
PVT1-206ENST00000517838 CCDC146Q8IYE0 955 aa9.53□□□□□ -0.88
PVT1-206ENST00000517838 MARVELD3Q96A59 401 aa9.53□□□□□ -0.88
PVT1-206ENST00000517838 CSRNP1Q96S65 589 aa9.53□□□□□ -0.88
PVT1-206ENST00000517838 ADM5C9JUS6 153 aa9.52□□□□□ -0.89
PVT1-206ENST00000517838 PSMD14O00487 310 aa9.52□□□□□ -0.89
PVT1-206ENST00000517838 ZNF157P51786 506 aaPredicted RBP9.52□□□□□ -0.89
PVT1-206ENST00000517838 PDIA6Q15084 440 aa9.52□□□□□ -0.89
PVT1-206ENST00000517838 TBC1D10BQ4KMP7 808 aaPredicted RBP9.52□□□□□ -0.89
PVT1-206ENST00000517838 DPF2Q92785 391 aa9.52□□□□□ -0.89
PVT1-206ENST00000517838 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
PVT1-206ENST00000517838 DDX27Q96GQ7 796 aaKnown RBP9.52□□□□□ -0.89
PVT1-206ENST00000517838 THUMPD2Q9BTF0 503 aaKnown RBP9.52□□□□□ -0.89
PVT1-206ENST00000517838 GBA2Q9HCG7 927 aaPredicted RBP9.52□□□□□ -0.89
PVT1-206ENST00000517838 KCNQ5Q9NR82 932 aa9.52□□□□□ -0.89
PVT1-206ENST00000517838 RCAN3Q9UKA8 241 aa9.52□□□□□ -0.89
PVT1-206ENST00000517838 CTU1Q7Z7A3 348 aaKnown RBP9.51□□□□□ -0.89
PVT1-206ENST00000517838 C2orf69Q8N8R5 385 aa9.51□□□□□ -0.89
PVT1-206ENST00000517838 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
PVT1-206ENST00000517838 SLC10A3P09131 477 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 EMP3P54852 163 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 RRP1P56182 461 aaKnown RBP9.5□□□□□ -0.89
PVT1-206ENST00000517838 PLCB2Q00722 1185 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 GRAPQ13588 217 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 WASHC4Q2M389 1173 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 PROSER3Q2NL68 480 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 ARSIQ5FYB1 569 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 RBM26Q5T8P6 1007 aaKnown RBP9.5□□□□□ -0.89
PVT1-206ENST00000517838 DDX46Q7L014 1031 aaKnown RBP9.5□□□□□ -0.89
PVT1-206ENST00000517838 NLRP10Q86W26 655 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 GRAPLQ8TC17 118 aaPredicted RBP9.5□□□□□ -0.89
PVT1-206ENST00000517838 DCPSQ96C86 337 aaKnown RBP9.5□□□□□ -0.89
PVT1-206ENST00000517838 HPS5Q9UPZ3 1129 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 PCDHGA4Q9Y5G9 962 aa9.5□□□□□ -0.89
PVT1-206ENST00000517838 ANXA1P04083 346 aa9.49□□□□□ -0.89
PVT1-206ENST00000517838 B4GALNT3Q6L9W6 998 aa9.49□□□□□ -0.89
PVT1-206ENST00000517838 CCDC136Q96JN2 1154 aa9.49□□□□□ -0.89
PVT1-206ENST00000517838 PLEKHF1Q96S99 279 aa9.49□□□□□ -0.89
PVT1-206ENST00000517838 DBNDD1Q9H9R9 158 aa9.49□□□□□ -0.89
PVT1-206ENST00000517838 CASP8AP2Q9UKL3 1982 aa9.49□□□□□ -0.89
PVT1-206ENST00000517838 ASTN2O75129 1339 aaPredicted RBP9.49□□□□□ -0.89
PVT1-206ENST00000517838 ERBB4Q15303 1308 aa9.49□□□□□ -0.89
PVT1-206ENST00000517838 RTL9Q8NET4 1388 aa9.49□□□□□ -0.89
PVT1-206ENST00000517838 PDE4DIPQ5VU43 2346 aa9.48□□□□□ -0.89
PVT1-206ENST00000517838 EIF2S2P20042 333 aaKnown RBP9.48□□□□□ -0.89
PVT1-206ENST00000517838 RPS12P25398 132 aaKnown RBP9.48□□□□□ -0.89
PVT1-206ENST00000517838 KHSRPQ92945 711 aaKnown RBP eCLIP9.48□□□□□ -0.89
PVT1-206ENST00000517838 ZNF428Q96B54 188 aa9.48□□□□□ -0.89
PVT1-206ENST00000517838 CDCA7LQ96GN5 454 aa9.48□□□□□ -0.89
PVT1-206ENST00000517838 POLLQ9UGP5 575 aa9.48□□□□□ -0.89
PVT1-206ENST00000517838 TRMT112Q9UI30 125 aaKnown RBP9.48□□□□□ -0.89
PVT1-206ENST00000517838 NSFL1CQ9UNZ2 370 aaKnown RBP9.48□□□□□ -0.89
PVT1-206ENST00000517838 TRPM7Q96QT4 1865 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 APAF1O14727 1248 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 VIL1P09327 827 aaKnown RBP9.47□□□□□ -0.89
PVT1-206ENST00000517838 GPSM2P81274 684 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 COPS6Q7L5N1 327 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 TMC4Q7Z404 712 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 RASAL3Q86YV0 1011 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 OXER1Q8TDS5 423 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 CELF1Q92879 486 aaKnown RBP9.47□□□□□ -0.89
PVT1-206ENST00000517838 CDCA5Q96FF9 252 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 SH3TC1Q8TE82 1336 aa9.47□□□□□ -0.89
PVT1-206ENST00000517838 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 ECE2O60344 883 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 TBC1D8O95759 1140 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 AIMP1Q12904 312 aaKnown RBP9.46□□□□□ -0.9
PVT1-206ENST00000517838 NFE2L2Q16236 605 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 PKN2Q16513 984 aaKnown RBP9.46□□□□□ -0.9
PVT1-206ENST00000517838 KIF4BQ2VIQ3 1234 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 HSP90AB3PQ58FF7 597 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 SULF1Q8IWU6 871 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.46□□□□□ -0.9
PVT1-206ENST00000517838 XAGE3Q8WTP9 111 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 ZNF296Q8WUU4 475 aaPredicted RBP9.46□□□□□ -0.9
PVT1-206ENST00000517838 GGA3Q9NZ52 723 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 TSPYL4Q9UJ04 414 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 DUOX1Q9NRD9 1551 aa9.46□□□□□ -0.9
PVT1-206ENST00000517838 POTEB3A0JP26 581 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 ZNF280AP59817 542 aaPredicted RBP9.45□□□□□ -0.9
PVT1-206ENST00000517838 CAMK2BQ13554 666 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 SCARF1Q14162 830 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 SF3B3Q15393 1217 aaKnown RBP9.45□□□□□ -0.9
PVT1-206ENST00000517838 POTEBQ6S5H4 581 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 MOB2Q70IA6 237 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 TBC1D16Q8TBP0 767 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 NECTIN2Q92692 538 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 RUNDC1Q96C34 613 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 HDAC9Q9UKV0 1011 aa9.45□□□□□ -0.9
PVT1-206ENST00000517838 NEFMP07197 916 aa9.44□□□□□ -0.9
PVT1-206ENST00000517838 FKBP1BP68106 108 aa9.44□□□□□ -0.9
PVT1-206ENST00000517838 ANGEL2Q5VTE6 544 aaKnown RBP9.44□□□□□ -0.9
PVT1-206ENST00000517838 FAM89AQ96GI7 184 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms