RNA–Protein interactions for RNA: ENST00000515895.1

SNORA40.9-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 93 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.9-201ENST00000515895 MUC3BQ9H195 1237 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 SRA1Q9HD15 236 aaKnown RBP4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 KCNK4Q9NYG8 393 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 KANSL3Q9P2N6 904 aa4.34□□□□□ -1.71
SNORA40.9-201ENST00000515895 ABL1P00519 1130 aa4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 GLB1P16278 677 aa4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 EPHA1P21709 976 aa4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 FKBP4Q02790 459 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 SF3B2Q13435 895 aaKnown RBP4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 AAMPQ13685 434 aa4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 C8orf34Q49A92 452 aa4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 XKR5Q6UX68 686 aa4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 NCAPG2Q86XI2 1143 aa4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 TMEM130Q8N3G9 435 aa4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 SH2B1Q9NRF2 756 aaPredicted RBP4.33□□□□□ -1.72
SNORA40.9-201ENST00000515895 SUPT5HO00267 1087 aaKnown RBP4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 TM4SF5O14894 197 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 DDX3YO15523 660 aaKnown RBP4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 TRPA1O75762 1119 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 FSTP19883 344 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 CES1P23141 567 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 CDC27P30260 824 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 USP5P45974 858 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 ZNF211Q13398 564 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 Q6ZS46 218 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 ACAD11Q709F0 780 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 CEP120Q8N960 986 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 C1orf127Q8N9H9 656 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 UBL7Q96S82 380 aaPredicted RBP4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 ARID3AQ99856 593 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 PBX4Q9BYU1 374 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 GGNBP2Q9H3C7 697 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 CNTN3Q9P232 1028 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 POLIQ9UNA4 740 aa4.32□□□□□ -1.72
SNORA40.9-201ENST00000515895 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 PTPRAP18433 802 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 CD68P34810 354 aaPredicted RBP4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 EHHADHQ08426 723 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 UBASH3BQ8TF42 649 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 PMEPA1Q969W9 287 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 HHIPQ96QV1 700 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 POP1Q99575 1024 aaKnown RBP4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 ANO2Q9NQ90 1003 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 EGFL7Q9UHF1 273 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 SALL4Q9UJQ4 1053 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 RNF112Q9ULX5 631 aa4.31□□□□□ -1.72
SNORA40.9-201ENST00000515895 FAM177BA6PVY3 158 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 FSCN2O14926 492 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 FZD6O60353 706 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 ADAM11O75078 769 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 PHACTR2O75167 634 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 TNFRSF21O75509 655 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 SSTR4P31391 388 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 GJD3Q8N144 294 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 ARMC10Q8N2F6 343 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 SNX29Q8TEQ0 813 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 FOXD4L4Q8WXT5 416 aaPredicted RBP4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 KLHDC7BQ96G42 594 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 CHRDQ9H2X0 955 aa4.3□□□□□ -1.72
SNORA40.9-201ENST00000515895 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 H3BRB1 525 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 ICMTO60725 284 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 HGSNATQ68CP4 663 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 FAM117BQ6P1L5 589 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 KIAA1211Q6ZU35 1233 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 RETREG2Q8NC44 543 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 TUT1Q9H6E5 874 aaKnown RBP4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 CCDC87Q9NVE4 849 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 DZANK1Q9NVP4 752 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 TIMELESSQ9UNS1 1208 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 RAXQ9Y2V3 346 aa4.29□□□□□ -1.72
SNORA40.9-201ENST00000515895 H3BRJ5 948 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 NFKBIEO00221 500 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 PDE2AO00408 941 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 EREGO14944 169 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 TGFB1P01137 390 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 EDN3P14138 238 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 SERPINB4P48594 390 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 CABP4P57796 275 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 NLRP12P59046 1061 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 PDE4CQ08493 712 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 DUOXA2Q1HG44 320 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 GLYCTKQ8IVS8 523 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 SLC7A3Q8WY07 619 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 UTP4Q969X6 686 aaKnown RBP4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 ADAM19Q9H013 955 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 SEC31BQ9NQW1 1179 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 PCMTD2Q9NV79 361 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 STOML1Q9UBI4 398 aa4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 FOXD3Q9UJU5 478 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.9-201ENST00000515895 HMX2A2RU54 273 aa4.27□□□□□ -1.73
SNORA40.9-201ENST00000515895 MED26O95402 600 aa4.27□□□□□ -1.73
SNORA40.9-201ENST00000515895 IGLV1-40P01703 118 aa4.27□□□□□ -1.73
SNORA40.9-201ENST00000515895 PIP4K2BP78356 416 aa4.27□□□□□ -1.73
SNORA40.9-201ENST00000515895 TMEM102Q8N9M5 508 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.9-201ENST00000515895 KLHL23Q8NBE8 558 aa4.27□□□□□ -1.73
SNORA40.9-201ENST00000515895 WNT8BQ93098 351 aa4.27□□□□□ -1.73
SNORA40.9-201ENST00000515895 FAM46AQ96IP4 442 aaKnown RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms