RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 AGBL3Q8NEM8 1001 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 CDCA5Q96FF9 252 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 ANKRD36CQ5JPF3 1778 aa7.99□□□□□ -1.13
GYPB-204ENST00000504951 PAPPA2Q9BXP8 1791 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 ADM5C9JUS6 153 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 U2SURPO15042 1029 aaKnown RBP7.98□□□□□ -1.13
GYPB-204ENST00000504951 EGFRP00533 1210 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 GPTP24298 496 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 SREBF2Q12772 1141 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 SF3B3Q15393 1217 aaKnown RBP7.98□□□□□ -1.13
GYPB-204ENST00000504951 TBC1D10BQ4KMP7 808 aaPredicted RBP7.98□□□□□ -1.13
GYPB-204ENST00000504951 DLK2Q6UY11 383 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 ARMC5Q96C12 935 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 EYA3Q99504 573 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 PODXL2Q9NZ53 605 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
GYPB-204ENST00000504951 RTL9Q8NET4 1388 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 TCERG1O14776 1098 aaKnown RBP7.97□□□□□ -1.13
GYPB-204ENST00000504951 TBC1D8O95759 1140 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 KIF4BQ2VIQ3 1234 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 CC2D1BQ5T0F9 858 aaKnown RBP7.97□□□□□ -1.13
GYPB-204ENST00000504951 MCM10Q7L590 875 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 SLC51AQ86UW1 340 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 NLRP10Q86W26 655 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
GYPB-204ENST00000504951 GMLQ99445 158 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 BABAM1Q9NWV8 329 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 LAMB4A4D0S4 1761 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 DUOX1Q9NRD9 1551 aa7.97□□□□□ -1.13
GYPB-204ENST00000504951 LRRC37AA6NMS7 1700 aa7.96□□□□□ -1.14
GYPB-204ENST00000504951 PDIA6Q15084 440 aa7.96□□□□□ -1.14
GYPB-204ENST00000504951 ARSIQ5FYB1 569 aa7.96□□□□□ -1.14
GYPB-204ENST00000504951 CFAP53Q96M91 514 aa7.96□□□□□ -1.14
GYPB-204ENST00000504951 ZBTB3Q9H5J0 574 aa7.96□□□□□ -1.14
GYPB-204ENST00000504951 GGA3Q9NZ52 723 aa7.96□□□□□ -1.14
GYPB-204ENST00000504951 POLLQ9UGP5 575 aa7.96□□□□□ -1.14
GYPB-204ENST00000504951 RRP7AQ9Y3A4 280 aaKnown RBP7.96□□□□□ -1.14
GYPB-204ENST00000504951 KIAA0100Q14667 2235 aaKnown RBP7.96□□□□□ -1.14
GYPB-204ENST00000504951 RBBP6Q7Z6E9 1792 aaKnown RBP7.96□□□□□ -1.14
GYPB-204ENST00000504951 MKI67P46013 3256 aaKnown RBP7.96□□□□□ -1.14
GYPB-204ENST00000504951 ZNF316A6NFI3 1004 aaPredicted RBP7.95□□□□□ -1.14
GYPB-204ENST00000504951 ECE2O60344 883 aa7.95□□□□□ -1.14
GYPB-204ENST00000504951 TRIM28Q13263 835 aaKnown RBP7.95□□□□□ -1.14
GYPB-204ENST00000504951 TCIRG1Q13488 830 aa7.95□□□□□ -1.14
GYPB-204ENST00000504951 CNGB1Q14028 1251 aaPredicted RBP7.95□□□□□ -1.14
GYPB-204ENST00000504951 SCARF1Q14162 830 aa7.95□□□□□ -1.14
GYPB-204ENST00000504951 LDLRAD1Q5T700 205 aa7.95□□□□□ -1.14
GYPB-204ENST00000504951 OTOP1Q7RTM1 612 aa7.95□□□□□ -1.14
GYPB-204ENST00000504951 STK24Q9Y6E0 443 aa7.95□□□□□ -1.14
GYPB-204ENST00000504951 SH3TC1Q8TE82 1336 aa7.95□□□□□ -1.14
GYPB-204ENST00000504951 MANSC4A6NHS7 340 aaPredicted RBP7.94□□□□□ -1.14
GYPB-204ENST00000504951 MAP3K11Q16584 847 aa7.94□□□□□ -1.14
GYPB-204ENST00000504951 ANGEL2Q5VTE6 544 aaKnown RBP7.94□□□□□ -1.14
GYPB-204ENST00000504951 RSBN1LQ6PCB5 846 aaPredicted RBP7.94□□□□□ -1.14
GYPB-204ENST00000504951 PODNQ7Z5L7 613 aa7.94□□□□□ -1.14
GYPB-204ENST00000504951 NGEFQ8N5V2 710 aa7.94□□□□□ -1.14
GYPB-204ENST00000504951 FBXO22Q8NEZ5 403 aa7.94□□□□□ -1.14
GYPB-204ENST00000504951 TBC1D16Q8TBP0 767 aa7.94□□□□□ -1.14
GYPB-204ENST00000504951 ZC3H12CQ9C0D7 883 aaKnown RBP7.94□□□□□ -1.14
GYPB-204ENST00000504951 DBNDD1Q9H9R9 158 aa7.94□□□□□ -1.14
GYPB-204ENST00000504951 KCNQ5Q9NR82 932 aa7.94□□□□□ -1.14
GYPB-204ENST00000504951 NSFL1CQ9UNZ2 370 aaKnown RBP7.94□□□□□ -1.14
GYPB-204ENST00000504951 PTPN22Q9Y2R2 807 aa7.94□□□□□ -1.14
GYPB-204ENST00000504951 USP17L8P0C7I0 530 aa7.93□□□□□ -1.14
GYPB-204ENST00000504951 ZBTB48P10074 688 aaPredicted RBP7.93□□□□□ -1.14
GYPB-204ENST00000504951 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
GYPB-204ENST00000504951 MYL6BP14649 208 aa7.93□□□□□ -1.14
GYPB-204ENST00000504951 PBX2P40425 430 aa7.93□□□□□ -1.14
GYPB-204ENST00000504951 RPS8P62241 208 aaKnown RBP7.93□□□□□ -1.14
GYPB-204ENST00000504951 DCTN1Q14203 1278 aa7.93□□□□□ -1.14
GYPB-204ENST00000504951 RBM26Q5T8P6 1007 aaKnown RBP7.93□□□□□ -1.14
GYPB-204ENST00000504951 SPRYD7Q5W111 196 aa7.93□□□□□ -1.14
GYPB-204ENST00000504951 ERO1AQ96HE7 468 aa7.93□□□□□ -1.14
GYPB-204ENST00000504951 MYOZ2Q9NPC6 264 aa7.93□□□□□ -1.14
GYPB-204ENST00000504951 TRMT112Q9UI30 125 aaKnown RBP7.93□□□□□ -1.14
GYPB-204ENST00000504951 SZT2Q5T011 3432 aa7.93□□□□□ -1.14
GYPB-204ENST00000504951 DDX60Q8IY21 1712 aaKnown RBP7.92□□□□□ -1.14
GYPB-204ENST00000504951 KDM3BQ7LBC6 1761 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 UBE2Q2LH0YL09 131 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 C6orf229H3BNL8 230 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 HSP90B1P14625 803 aaKnown RBP7.92□□□□□ -1.14
GYPB-204ENST00000504951 NF2P35240 595 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 GPSM2P81274 684 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 ARMC9Q7Z3E5 817 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 CELF1Q92879 486 aaKnown RBP7.92□□□□□ -1.14
GYPB-204ENST00000504951 ISCA1Q9BUE6 129 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 R3HDMLQ9H3Y0 253 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 MIS18AQ9NYP9 233 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 LAMB2P55268 1798 aa7.92□□□□□ -1.14
GYPB-204ENST00000504951 HTTP42858 3142 aa7.91□□□□□ -1.14
GYPB-204ENST00000504951 TESPA1A2RU30 521 aaPredicted RBP7.91□□□□□ -1.14
GYPB-204ENST00000504951 STK25O00506 426 aa7.91□□□□□ -1.14
GYPB-204ENST00000504951 DLL1O00548 723 aa7.91□□□□□ -1.14
GYPB-204ENST00000504951 U2AF1L5P0DN76 240 aaPredicted RBP7.91□□□□□ -1.14
GYPB-204ENST00000504951 U2AF1Q01081 240 aaKnown RBP eCLIP7.91□□□□□ -1.14
GYPB-204ENST00000504951 ARHGEF6Q15052 776 aa7.91□□□□□ -1.14
GYPB-204ENST00000504951 ANKRD13DQ6ZTN6 518 aa7.91□□□□□ -1.14
GYPB-204ENST00000504951 ZNF333Q96JL9 665 aa7.91□□□□□ -1.14
GYPB-204ENST00000504951 TRIM17Q9Y577 477 aa7.91□□□□□ -1.14
GYPB-204ENST00000504951 ASTN2O75129 1339 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms