RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TPM4P67936 248 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 RHOXF2Q9BQY4 288 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 DLG5Q8TDM6 1919 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 A0A0U1RQJ8 604 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 COBLO75128 1261 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 SASH1O94885 1247 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 HOXC9P31274 260 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 ETF1P62495 437 aaKnown RBP8.84□□□□□ -0.99
NEDD9-208ENST00000504387 ATRIPQ8WXE1 791 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 CRB1P82279 1406 aa8.84□□□□□ -0.99
NEDD9-208ENST00000504387 TRHP20396 242 aaPredicted RBP8.84□□□□□ -0.99
NEDD9-208ENST00000504387 NAT10Q9H0A0 1025 aaKnown RBP8.84□□□□□ -0.99
NEDD9-208ENST00000504387 BICC1Q9H694 974 aaKnown RBP8.84□□□□□ -0.99
NEDD9-208ENST00000504387 NEMFO60524 1076 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 SLC3A2P08195 630 aaKnown RBP8.83□□□□□ -1
NEDD9-208ENST00000504387 CYP21A2P08686 494 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 KCNA6P17658 529 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 FANCCQ00597 558 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 GPS2Q13227 327 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 NBPF6Q5VWK0 638 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 CCDC102AQ96A19 550 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 NBPF4Q96M43 638 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 PARD6BQ9BYG5 372 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 ADAM21Q9UKJ8 722 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 ATP5J2-PTCD1G3V325 749 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 H3BQF6 201 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 TULP2O00295 520 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 PTCD1O75127 700 aaKnown RBP8.83□□□□□ -1
NEDD9-208ENST00000504387 FAM160A1Q05DH4 1040 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 MTX1Q13505 466 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 POLA2Q14181 598 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 ANKRD1Q15327 319 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 LONRF3Q496Y0 759 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 BEND3Q5T5X7 828 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 DHX37Q8IY37 1157 aaKnown RBP8.83□□□□□ -1
NEDD9-208ENST00000504387 TRMT44Q8IYL2 757 aaKnown RBP8.83□□□□□ -1
NEDD9-208ENST00000504387 SUCLG2Q96I99 432 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 PDE11AQ9HCR9 933 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 NLRP2Q9NX02 1062 aa8.83□□□□□ -1
NEDD9-208ENST00000504387 LOC102724159A0A0B4J2E5 919 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 TBC1D8O95759 1140 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 CASQ1P31415 396 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 MTF1Q14872 753 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 PWP2Q15269 919 aaKnown RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 ZNF827Q17R98 1081 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 FKBP15Q5T1M5 1219 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 CCDC12Q8WUD4 166 aaPredicted RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 AIFM3Q96NN9 605 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 TM6SF1Q9BZW5 370 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 ARFGAP3Q9NP61 516 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 ATP7BP35670 1465 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 CPSF1Q10570 1443 aaKnown RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 NEURL4Q96JN8 1562 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 GTF2A1P52655 376 aaPredicted RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 GSDMDP57764 484 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 FAM193AP78312 1265 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 MRPS27Q92552 414 aaKnown RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 IFT172Q9UG01 1749 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 REREQ9P2R6 1566 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 MYO5BQ9ULV0 1848 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 TAF5LO75529 589 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 TOP1P11387 765 aaKnown RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 PNOCQ13519 176 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 HSP90AB4PQ58FF6 505 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 CC2D1AQ6P1N0 951 aaPredicted RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 RBM43Q6ZSC3 357 aaKnown RBP8.82□□□□□ -1
NEDD9-208ENST00000504387 STOX1Q6ZVD7 989 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 DHX58Q96C10 678 aa8.82□□□□□ -1
NEDD9-208ENST00000504387 ADCY9O60503 1353 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 FLT4P35916 1363 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 USP32Q8NFA0 1604 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 CTDNEP1O95476 244 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 PPP2R3AQ06190 1150 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 TOGARAM2Q6ZUX3 1019 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 TXLNBQ8N3L3 684 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 CCDC82Q8N4S0 544 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 NSUN7Q8NE18 718 aaKnown RBP8.81□□□□□ -1
NEDD9-208ENST00000504387 CLIC6Q96NY7 704 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 SNRKQ9NRH2 765 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 FANCLQ9NW38 375 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 KIAA1468Q9P260 1216 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 RRP15Q9Y3B9 282 aaKnown RBP8.81□□□□□ -1
NEDD9-208ENST00000504387 ZNF202O95125 648 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 CDC25BP30305 580 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 SARM1Q6SZW1 724 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 MYD88Q99836 296 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 AATKQ6ZMQ8 1374 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 TNRQ92752 1358 aa8.81□□□□□ -1
NEDD9-208ENST00000504387 GOLIM4O00461 696 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 FOXN1O15353 648 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 TADA3O75528 432 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 ZRANB2O95218 330 aaKnown RBP eCLIP8.8□□□□□ -1
NEDD9-208ENST00000504387 KLHL10Q6JEL2 608 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 L2HGDHQ9H9P8 463 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 FAM53CQ9NYF3 392 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 A2ML1A8K2U0 1454 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 CDK12Q9NYV4 1490 aaPredicted RBP8.8□□□□□ -1
NEDD9-208ENST00000504387 AOX1Q06278 1338 aa8.8□□□□□ -1
NEDD9-208ENST00000504387 TTC41PQ6P2S7 1318 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms