RNA–Protein interactions for RNA: ENST00000498236.1

CDC42-205, Transcript of cell division cycle 42, humanhuman

TSL 5

Gene CDC42, Length 816 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-205ENST00000498236 COL15A1P39059 1388 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 C6orf229H3BNL8 230 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 ACTN4O43707 911 aaKnown RBP9.53□□□□□ -0.88
CDC42-205ENST00000498236 USP17L8P0C7I0 530 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 CYP19A1P11511 503 aaPredicted RBP9.53□□□□□ -0.88
CDC42-205ENST00000498236 ATP8B2P98198 1209 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 NEXNQ0ZGT2 675 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 MTX1Q13505 466 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 DNAJC10Q8IXB1 793 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 SYTL4Q96C24 671 aaPredicted RBP9.53□□□□□ -0.88
CDC42-205ENST00000498236 SLC4A9Q96Q91 983 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 PRM3Q9NNZ6 103 aa9.53□□□□□ -0.88
CDC42-205ENST00000498236 GRM8O00222 908 aa9.52□□□□□ -0.89
CDC42-205ENST00000498236 A1BGP04217 495 aa9.52□□□□□ -0.89
CDC42-205ENST00000498236 IGKV5-2P06315 115 aa9.52□□□□□ -0.89
CDC42-205ENST00000498236 TJP1Q07157 1748 aa9.52□□□□□ -0.89
CDC42-205ENST00000498236 AIMP1Q12904 312 aaKnown RBP9.52□□□□□ -0.89
CDC42-205ENST00000498236 CHD1LQ86WJ1 897 aa9.52□□□□□ -0.89
CDC42-205ENST00000498236 HOMEZQ8IX15 550 aa9.52□□□□□ -0.89
CDC42-205ENST00000498236 SSH3Q8TE77 659 aa9.52□□□□□ -0.89
CDC42-205ENST00000498236 LRRFIP2Q9Y608 721 aaKnown RBP9.52□□□□□ -0.89
CDC42-205ENST00000498236 NUP188Q5SRE5 1749 aa9.51□□□□□ -0.89
CDC42-205ENST00000498236 ARFGEF2Q9Y6D5 1785 aa9.51□□□□□ -0.89
CDC42-205ENST00000498236 NEURL1BA8MQ27 555 aa9.51□□□□□ -0.89
CDC42-205ENST00000498236 GFRA3O60609 400 aa9.51□□□□□ -0.89
CDC42-205ENST00000498236 NBPF7P0C2Y1 421 aaPredicted RBP9.51□□□□□ -0.89
CDC42-205ENST00000498236 GCKRQ14397 625 aa9.51□□□□□ -0.89
CDC42-205ENST00000498236 MORN1Q5T089 497 aa9.51□□□□□ -0.89
CDC42-205ENST00000498236 HELBQ8NG08 1087 aaPredicted RBP9.51□□□□□ -0.89
CDC42-205ENST00000498236 QTRT2Q9H974 415 aaKnown RBP9.51□□□□□ -0.89
CDC42-205ENST00000498236 C9orf78Q9NZ63 289 aaPredicted RBP9.51□□□□□ -0.89
CDC42-205ENST00000498236 NHSQ6T4R5 1651 aa9.51□□□□□ -0.89
CDC42-205ENST00000498236 RREB1Q92766 1687 aa9.51□□□□□ -0.89
CDC42-205ENST00000498236 PALLDQ8WX93 1383 aa9.5□□□□□ -0.89
CDC42-205ENST00000498236 LOC102724428A0A0B4J2F2 783 aa9.5□□□□□ -0.89
CDC42-205ENST00000498236 IL6STP40189 918 aaPredicted RBP9.5□□□□□ -0.89
CDC42-205ENST00000498236 RGS3P49796 1198 aa9.5□□□□□ -0.89
CDC42-205ENST00000498236 SIK1P57059 783 aa9.5□□□□□ -0.89
CDC42-205ENST00000498236 TRIM28Q13263 835 aaKnown RBP9.5□□□□□ -0.89
CDC42-205ENST00000498236 CWF19L2Q2TBE0 894 aaKnown RBP9.5□□□□□ -0.89
CDC42-205ENST00000498236 SKAP1Q86WV1 359 aa9.5□□□□□ -0.89
CDC42-205ENST00000498236 ACSBG1Q96GR2 724 aa9.5□□□□□ -0.89
CDC42-205ENST00000498236 PNMA6EA0A0J9YXQ4 647 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 ERVV-1B6SEH8 477 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 KCNQ2O43526 872 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 PIP4K2AP48426 406 aaPredicted RBP9.49□□□□□ -0.89
CDC42-205ENST00000498236 Q3C1V9 767 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 PUS10Q3MIT2 529 aaKnown RBP9.49□□□□□ -0.89
CDC42-205ENST00000498236 ANKRD45Q5TZF3 282 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 ZNF772Q68DY9 489 aaPredicted RBP9.49□□□□□ -0.89
CDC42-205ENST00000498236 TRAF7Q6Q0C0 670 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 TTLL7Q6ZT98 887 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 CCDC191Q8NCU4 936 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 MYD88Q99836 296 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 BACH2Q9BYV9 841 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 GDPD2Q9HCC8 539 aa9.49□□□□□ -0.89
CDC42-205ENST00000498236 CFAP99D6REC4 459 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 MYT1Q01538 1121 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 INTS5Q6P9B9 1019 aaKnown RBP9.48□□□□□ -0.89
CDC42-205ENST00000498236 KIF6Q6ZMV9 814 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 PPP1R42Q7Z4L9 355 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 TSC1Q92574 1164 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 KAZALD1Q96I82 304 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 ISCA1Q9BUE6 129 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 CCDC87Q9NVE4 849 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 SLC27A5Q9Y2P5 690 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 MAP3K15Q6ZN16 1313 aa9.48□□□□□ -0.89
CDC42-205ENST00000498236 COL5A3P25940 1745 aaPredicted RBP9.48□□□□□ -0.89
CDC42-205ENST00000498236 H7C1W4 665 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 SRGAP3O43295 1099 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 RAB11FIP3O75154 756 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 EIF5P55010 431 aaKnown RBP9.47□□□□□ -0.89
CDC42-205ENST00000498236 CASP7P55210 303 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 TCIRG1Q13488 830 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 ITPK1Q13572 414 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 RABL6Q3YEC7 729 aaPredicted RBP9.47□□□□□ -0.89
CDC42-205ENST00000498236 HSP90AB4PQ58FF6 505 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 HSP90AB3PQ58FF7 597 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 RETREG3Q86VR2 466 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 SYMPKQ92797 1274 aaKnown RBP9.47□□□□□ -0.89
CDC42-205ENST00000498236 LNPKQ9C0E8 428 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 CWC25Q9NXE8 425 aaPredicted RBP9.47□□□□□ -0.89
CDC42-205ENST00000498236 ZBTB1Q9Y2K1 713 aa9.47□□□□□ -0.89
CDC42-205ENST00000498236 NOP58Q9Y2X3 529 aaKnown RBP9.47□□□□□ -0.89
CDC42-205ENST00000498236 RBM19Q9Y4C8 960 aaKnown RBP9.47□□□□□ -0.89
CDC42-205ENST00000498236 CRKLP46109 303 aaKnown RBP9.46□□□□□ -0.9
CDC42-205ENST00000498236 RBM6P78332 1123 aaKnown RBP9.46□□□□□ -0.9
CDC42-205ENST00000498236 C8orf34Q49A92 452 aa9.46□□□□□ -0.9
CDC42-205ENST00000498236 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
CDC42-205ENST00000498236 PRR7Q8TB68 274 aa9.46□□□□□ -0.9
CDC42-205ENST00000498236 SUCLG2Q96I99 432 aa9.46□□□□□ -0.9
CDC42-205ENST00000498236 ARID3AQ99856 593 aa9.46□□□□□ -0.9
CDC42-205ENST00000498236 BICC1Q9H694 974 aaKnown RBP9.46□□□□□ -0.9
CDC42-205ENST00000498236 ZNF330Q9Y3S2 320 aaPredicted RBP9.46□□□□□ -0.9
CDC42-205ENST00000498236 BTAF1O14981 1849 aa9.46□□□□□ -0.9
CDC42-205ENST00000498236 CNTNAP4Q9C0A0 1308 aa9.46□□□□□ -0.9
CDC42-205ENST00000498236 KAT6BQ8WYB5 2073 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms