RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 UNC80Q8N2C7 3258 aa6.4□□□□□ -1.39
PTPRK-213ENST00000490332 ADAMTSL1Q8N6G6 1762 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 U2SURPO15042 1029 aaKnown RBP6.39□□□□□ -1.39
PTPRK-213ENST00000490332 MMP16P51512 607 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 SKOR1P84550 965 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 TRIM46Q7Z4K8 759 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 CTU1Q7Z7A3 348 aaKnown RBP6.39□□□□□ -1.39
PTPRK-213ENST00000490332 PNMA8AQ86V59 439 aaPredicted RBP6.39□□□□□ -1.39
PTPRK-213ENST00000490332 CNTROBQ8N137 903 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 PLEKHF1Q96S99 279 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 REPIN1Q9BWE0 567 aaKnown RBP6.39□□□□□ -1.39
PTPRK-213ENST00000490332 PRDM6Q9NQX0 595 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 SAGE1Q9NXZ1 904 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 CABP1Q9NZU7 370 aa6.39□□□□□ -1.39
PTPRK-213ENST00000490332 EIF5BO60841 1220 aaKnown RBP6.38□□□□□ -1.39
PTPRK-213ENST00000490332 AOC2O75106 756 aa6.38□□□□□ -1.39
PTPRK-213ENST00000490332 RIPK4P57078 832 aa6.38□□□□□ -1.39
PTPRK-213ENST00000490332 LMOD3Q0VAK6 560 aa6.38□□□□□ -1.39
PTPRK-213ENST00000490332 ALDH1L2Q3SY69 923 aa6.38□□□□□ -1.39
PTPRK-213ENST00000490332 EAPPQ56P03 285 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-213ENST00000490332 DZIP1LQ8IYY4 767 aaKnown RBP6.38□□□□□ -1.39
PTPRK-213ENST00000490332 FRAT1Q92837 279 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-213ENST00000490332 HHIPL1Q96JK4 782 aa6.38□□□□□ -1.39
PTPRK-213ENST00000490332 COL25A1Q9BXS0 654 aaPredicted RBP6.38□□□□□ -1.39
PTPRK-213ENST00000490332 GGNBP2Q9H3C7 697 aa6.38□□□□□ -1.39
PTPRK-213ENST00000490332 DDX21Q9NR30 783 aaKnown RBP eCLIP6.38□□□□□ -1.39
PTPRK-213ENST00000490332 DDX19BQ9UMR2 479 aa6.38□□□□□ -1.39
PTPRK-213ENST00000490332 FAM208AQ9UK61 1670 aaKnown RBP6.38□□□□□ -1.39
PTPRK-213ENST00000490332 ANKRD26Q9UPS8 1709 aa6.38□□□□□ -1.39
PTPRK-213ENST00000490332 NFAT5O94916 1531 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 DDX11L8A8MPP1 907 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 GNPATO15228 680 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 DDNO94850 711 aaPredicted RBP6.37□□□□□ -1.39
PTPRK-213ENST00000490332 BMP1P13497 986 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 GSK3AP49840 483 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 MVPQ14764 893 aaKnown RBP6.37□□□□□ -1.39
PTPRK-213ENST00000490332 AKAP4Q5JQC9 854 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 RC3H1Q5TC82 1133 aaKnown RBP6.37□□□□□ -1.39
PTPRK-213ENST00000490332 NPM2Q86SE8 214 aaKnown RBP6.37□□□□□ -1.39
PTPRK-213ENST00000490332 KCNV2Q8TDN2 545 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 UPF2Q9HAU5 1272 aaKnown RBP6.37□□□□□ -1.39
PTPRK-213ENST00000490332 COG6Q9Y2V7 657 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 RRP7AQ9Y3A4 280 aaKnown RBP6.37□□□□□ -1.39
PTPRK-213ENST00000490332 TLL2Q9Y6L7 1015 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 VCANP13611 3396 aa6.37□□□□□ -1.39
PTPRK-213ENST00000490332 DLEC1Q9Y238 1755 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 EDC4Q6P2E9 1401 aaKnown RBP6.36□□□□□ -1.39
PTPRK-213ENST00000490332 KIAA0100Q14667 2235 aaKnown RBP6.36□□□□□ -1.39
PTPRK-213ENST00000490332 KIF16BQ96L93 1317 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 NFKBIEO00221 500 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 PLA2G5P39877 138 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 GNAI1P63096 354 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 CIAPIN1Q6FI81 312 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 FTSJ3Q8IY81 847 aaKnown RBP6.36□□□□□ -1.39
PTPRK-213ENST00000490332 PANK1Q8TE04 598 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 NLRP7Q8WX94 980 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 ARHGAP45Q92619 1136 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 COG3Q96JB2 828 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 HACL1Q9UJ83 578 aa6.36□□□□□ -1.39
PTPRK-213ENST00000490332 RANBP2P49792 3224 aaKnown RBP6.36□□□□□ -1.39
PTPRK-213ENST00000490332 CD163L1Q9NR16 1453 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 AKAP11Q9UKA4 1901 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 DXOO77932 396 aaKnown RBP6.35□□□□□ -1.39
PTPRK-213ENST00000490332 IGHDP01880 384 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 CHRNA5P30532 468 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 RGS3P49796 1198 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 EXOSC9Q06265 439 aaKnown RBP6.35□□□□□ -1.39
PTPRK-213ENST00000490332 NOGQ13253 232 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 HDAC1Q13547 482 aaPredicted RBP6.35□□□□□ -1.39
PTPRK-213ENST00000490332 BECN1Q14457 450 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 NFE2L2Q16236 605 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 TRAPPC3LQ5T215 181 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 MAP1SQ66K74 1059 aaPredicted RBP6.35□□□□□ -1.39
PTPRK-213ENST00000490332 ATF7IPQ6VMQ6 1270 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 TTLL6Q8N841 843 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 ZCRB1Q8TBF4 217 aaKnown RBP6.35□□□□□ -1.39
PTPRK-213ENST00000490332 FAM122AQ96E09 287 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 SMC4Q9NTJ3 1288 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.35□□□□□ -1.39
PTPRK-213ENST00000490332 POLKQ9UBT6 870 aa6.35□□□□□ -1.39
PTPRK-213ENST00000490332 COL3A1P02461 1466 aaPredicted RBP6.34□□□□□ -1.39
PTPRK-213ENST00000490332 FER1L6Q2WGJ9 1857 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 LTBP3Q9NS15 1303 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 GYS1P13807 737 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 EPHX2P34913 555 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 WNT7BP56706 349 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 HIC1Q14526 733 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 C8orf34Q49A92 452 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 ANKRD24Q8TF21 1146 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 IFT57Q9NWB7 429 aa6.34□□□□□ -1.39
PTPRK-213ENST00000490332 RTCBQ9Y3I0 505 aaKnown RBP6.34□□□□□ -1.39
PTPRK-213ENST00000490332 MAP2P11137 1827 aaKnown RBP6.34□□□□□ -1.4
PTPRK-213ENST00000490332 SIAH2O43255 324 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 ALDH1A1P00352 501 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 PRKAR2BP31323 418 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 IL13P35225 146 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 SAPCD2Q86UD0 394 aa6.33□□□□□ -1.4
PTPRK-213ENST00000490332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.33□□□□□ -1.41e-6■■■□□ 19
PTPRK-213ENST00000490332 LINC00116Q8NCU8 138 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms