RNA–Protein interactions for RNA: ENST00000489876.1

HUWE1-213, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene HUWE1, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-213ENST00000489876 A0A087WZG4 1122 aa10.68□□□□□ -0.7
HUWE1-213ENST00000489876 CHL1O00533 1208 aa10.68□□□□□ -0.7
HUWE1-213ENST00000489876 GRIN3BO60391 1043 aa10.68□□□□□ -0.7
HUWE1-213ENST00000489876 RASSF7Q02833 373 aa10.68□□□□□ -0.7
HUWE1-213ENST00000489876 FOXC1Q12948 553 aa10.68□□□□□ -0.7
HUWE1-213ENST00000489876 ARHGAP27Q6ZUM4 889 aa10.68□□□□□ -0.7
HUWE1-213ENST00000489876 C2CD5Q86YS7 1000 aa10.68□□□□□ -0.7
HUWE1-213ENST00000489876 FER1L6Q2WGJ9 1857 aa10.68□□□□□ -0.7
HUWE1-213ENST00000489876 ARFGEF2Q9Y6D5 1785 aa10.67□□□□□ -0.7
HUWE1-213ENST00000489876 TULP1O00294 542 aaPredicted RBP10.67□□□□□ -0.7
HUWE1-213ENST00000489876 KDM4AO75164 1064 aa10.67□□□□□ -0.7
HUWE1-213ENST00000489876 GUCA2AQ02747 115 aa10.67□□□□□ -0.7
HUWE1-213ENST00000489876 PNNQ9H307 717 aaKnown RBP10.67□□□□□ -0.7
HUWE1-213ENST00000489876 ZBTB3Q9H5J0 574 aa10.67□□□□□ -0.7
HUWE1-213ENST00000489876 ABCC12Q96J65 1359 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 UBN2Q6ZU65 1347 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 FAM187AA6NFU0 413 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 POTECB2RU33 542 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 GPTP24298 496 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 MSS51Q4VC12 460 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 OLFM4Q6UX06 510 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 PNISRQ8TF01 805 aaKnown RBP10.66□□□□□ -0.7
HUWE1-213ENST00000489876 MBIPQ9NS73 344 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 PIM2Q9P1W9 311 aa10.66□□□□□ -0.7
HUWE1-213ENST00000489876 ZNF853P0CG23 659 aa10.65□□□□□ -0.7
HUWE1-213ENST00000489876 PKDCCQ504Y2 493 aa10.65□□□□□ -0.7
HUWE1-213ENST00000489876 DALRD3Q5D0E6 543 aaKnown RBP10.65□□□□□ -0.7
HUWE1-213ENST00000489876 NUTM1Q86Y26 1132 aa10.65□□□□□ -0.7
HUWE1-213ENST00000489876 SYNE4Q8N205 404 aa10.65□□□□□ -0.7
HUWE1-213ENST00000489876 SETDB2Q96T68 719 aa10.65□□□□□ -0.7
HUWE1-213ENST00000489876 FAM217BQ9NTX9 383 aaPredicted RBP10.65□□□□□ -0.7
HUWE1-213ENST00000489876 NIP7Q9Y221 180 aaKnown RBP eCLIP10.65□□□□□ -0.7
HUWE1-213ENST00000489876 COL4A1P02462 1669 aa10.65□□□□□ -0.7
HUWE1-213ENST00000489876 DICER1Q9UPY3 1922 aaKnown RBP10.64□□□□□ -0.71
HUWE1-213ENST00000489876 TIAM2Q8IVF5 1701 aa10.64□□□□□ -0.71
HUWE1-213ENST00000489876 MAP3K15Q6ZN16 1313 aa10.64□□□□□ -0.71
HUWE1-213ENST00000489876 ELL2O00472 640 aaPredicted RBP10.64□□□□□ -0.71
HUWE1-213ENST00000489876 DGAT1O75907 488 aa10.64□□□□□ -0.71
HUWE1-213ENST00000489876 RPIAP49247 311 aa10.64□□□□□ -0.71
HUWE1-213ENST00000489876 AIMP1Q12904 312 aaKnown RBP10.64□□□□□ -0.71
HUWE1-213ENST00000489876 ZNF787Q6DD87 383 aa10.64□□□□□ -0.71
HUWE1-213ENST00000489876 CNBD1Q8NA66 436 aa10.64□□□□□ -0.71
HUWE1-213ENST00000489876 ZNF622Q969S3 477 aaKnown RBP eCLIP10.64□□□□□ -0.71
HUWE1-213ENST00000489876 MRS2Q9HD23 443 aa10.64□□□□□ -0.71
HUWE1-213ENST00000489876 NFKBIEO00221 500 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
HUWE1-213ENST00000489876 ST8SIA5O15466 376 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 HOXA2O43364 376 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 ERFEQ4G0M1 354 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 SUSD4Q5VX71 490 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 C9orf131Q5VYM1 1079 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 NBPF5PQ86XG9 351 aaPredicted RBP10.63□□□□□ -0.71
HUWE1-213ENST00000489876 TSPYL6Q8N831 410 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 C8orf58Q8NAV2 365 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 XAGE3Q8WTP9 111 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 TSR2Q969E8 191 aaKnown RBP10.63□□□□□ -0.71
HUWE1-213ENST00000489876 CHPF2Q9P2E5 772 aa10.63□□□□□ -0.71
HUWE1-213ENST00000489876 DDX60Q8IY21 1712 aaKnown RBP10.62□□□□□ -0.71
HUWE1-213ENST00000489876 MMP16P51512 607 aa10.62□□□□□ -0.71
HUWE1-213ENST00000489876 LMOD3Q0VAK6 560 aa10.62□□□□□ -0.71
HUWE1-213ENST00000489876 DUSP27Q5VZP5 1158 aa10.62□□□□□ -0.71
HUWE1-213ENST00000489876 COPS6Q7L5N1 327 aa10.62□□□□□ -0.71
HUWE1-213ENST00000489876 ZNF34Q8IZ26 560 aa10.62□□□□□ -0.71
HUWE1-213ENST00000489876 SYMPKQ92797 1274 aaKnown RBP10.62□□□□□ -0.71
HUWE1-213ENST00000489876 BRIP1Q9BX63 1249 aa10.62□□□□□ -0.71
HUWE1-213ENST00000489876 GPCPD1Q9NPB8 672 aa10.62□□□□□ -0.71
HUWE1-213ENST00000489876 H0YIN7 160 aa10.61□□□□□ -0.71
HUWE1-213ENST00000489876 ANP32CO43423 234 aa10.61□□□□□ -0.71
HUWE1-213ENST00000489876 C21orf2O43822 256 aa10.61□□□□□ -0.71
HUWE1-213ENST00000489876 SRGNP10124 158 aa10.61□□□□□ -0.71
HUWE1-213ENST00000489876 GRIPAP1Q4V328 841 aa10.61□□□□□ -0.71
HUWE1-213ENST00000489876 CLEC4GQ6UXB4 293 aa10.61□□□□□ -0.71
HUWE1-213ENST00000489876 NPM2Q86SE8 214 aaKnown RBP10.61□□□□□ -0.71
HUWE1-213ENST00000489876 TTLL6Q8N841 843 aa10.61□□□□□ -0.71
HUWE1-213ENST00000489876 NMRK2Q9NPI5 230 aa10.61□□□□□ -0.71
HUWE1-213ENST00000489876 ERVV-1B6SEH8 477 aa10.6□□□□□ -0.71
HUWE1-213ENST00000489876 NTSR2O95665 410 aa10.6□□□□□ -0.71
HUWE1-213ENST00000489876 Q3C1V9 767 aa10.6□□□□□ -0.71
HUWE1-213ENST00000489876 GIGYF2Q6Y7W6 1299 aaKnown RBP10.6□□□□□ -0.71
HUWE1-213ENST00000489876 USB1Q9BQ65 265 aaKnown RBP10.6□□□□□ -0.71
HUWE1-213ENST00000489876 PHAXQ9H814 394 aaKnown RBP10.6□□□□□ -0.71
HUWE1-213ENST00000489876 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
HUWE1-213ENST00000489876 TOR4AQ9NXH8 423 aa10.6□□□□□ -0.71
HUWE1-213ENST00000489876 RNF181Q9P0P0 153 aa10.6□□□□□ -0.71
HUWE1-213ENST00000489876 COL4A5P29400 1685 aa10.6□□□□□ -0.71
HUWE1-213ENST00000489876 DXOO77932 396 aaKnown RBP10.59□□□□□ -0.71
HUWE1-213ENST00000489876 CLCN1P35523 988 aa10.59□□□□□ -0.71
HUWE1-213ENST00000489876 HDGFL1Q5TGJ6 251 aa10.59□□□□□ -0.71
HUWE1-213ENST00000489876 PRPF40BQ6NWY9 871 aaKnown RBP10.59□□□□□ -0.71
HUWE1-213ENST00000489876 KIF6Q6ZMV9 814 aa10.59□□□□□ -0.71
HUWE1-213ENST00000489876 WWC1Q8IX03 1113 aa10.59□□□□□ -0.71
HUWE1-213ENST00000489876 FAM9BQ8IZU0 186 aa10.59□□□□□ -0.71
HUWE1-213ENST00000489876 C7orf43Q8WVR3 580 aa10.59□□□□□ -0.71
HUWE1-213ENST00000489876 DDX21Q9NR30 783 aaKnown RBP eCLIP10.59□□□□□ -0.71
HUWE1-213ENST00000489876 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
HUWE1-213ENST00000489876 KLRG2A4D1S0 409 aaPredicted RBP10.58□□□□□ -0.72
HUWE1-213ENST00000489876 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
HUWE1-213ENST00000489876 NPHP1O15259 732 aa10.58□□□□□ -0.72
HUWE1-213ENST00000489876 PDE6BP35913 854 aa10.58□□□□□ -0.72
HUWE1-213ENST00000489876 C1QTNF8P60827 252 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms