RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
PRPF40A-209ENST00000486100 ZNF609O15014 1411 aa23.23■■□□□ 1.31
PRPF40A-209ENST00000486100 TAF5LO75529 589 aa23.22■■□□□ 1.31
PRPF40A-209ENST00000486100 KIF4BQ2VIQ3 1234 aa23.22■■□□□ 1.31
PRPF40A-209ENST00000486100 USP48Q86UV5 1035 aa23.22■■□□□ 1.31
PRPF40A-209ENST00000486100 MIER1Q8N108 512 aa23.22■■□□□ 1.31
PRPF40A-209ENST00000486100 HELBQ8NG08 1087 aaPredicted RBP23.22■■□□□ 1.31
PRPF40A-209ENST00000486100 CELF2O95319 508 aaKnown RBP23.21■■□□□ 1.31
PRPF40A-209ENST00000486100 USP17L8P0C7I0 530 aa23.21■■□□□ 1.31
PRPF40A-209ENST00000486100 HSPA1AP0DMV8 641 aaKnown RBP23.21■■□□□ 1.31
PRPF40A-209ENST00000486100 HSPA1BP0DMV9 641 aaKnown RBP23.21■■□□□ 1.31
PRPF40A-209ENST00000486100 KLRK1P26718 216 aa23.21■■□□□ 1.31
PRPF40A-209ENST00000486100 STRIP1Q5VSL9 837 aa23.21■■□□□ 1.31
PRPF40A-209ENST00000486100 C15orf52Q6ZUT6 534 aaKnown RBP23.21■■□□□ 1.31
PRPF40A-209ENST00000486100 SNAP23O00161 211 aa23.2■■□□□ 1.3
PRPF40A-209ENST00000486100 DACT2Q5SW24 774 aa23.2■■□□□ 1.3
PRPF40A-209ENST00000486100 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
PRPF40A-209ENST00000486100 USP44Q9H0E7 712 aa23.2■■□□□ 1.3
PRPF40A-209ENST00000486100 CNNM1Q9NRU3 951 aa23.2■■□□□ 1.3
PRPF40A-209ENST00000486100 TLL2Q9Y6L7 1015 aa23.2■■□□□ 1.3
PRPF40A-209ENST00000486100 SCN9AQ15858 1988 aa23.2■■□□□ 1.3
PRPF40A-209ENST00000486100 BRPF1P55201 1214 aaPredicted RBP23.19■■□□□ 1.3
PRPF40A-209ENST00000486100 RABL6Q3YEC7 729 aaPredicted RBP23.19■■□□□ 1.3
PRPF40A-209ENST00000486100 TTLL5Q6EMB2 1281 aa23.19■■□□□ 1.3
PRPF40A-209ENST00000486100 BICC1Q9H694 974 aaKnown RBP23.19■■□□□ 1.3
PRPF40A-209ENST00000486100 IRS2Q9Y4H2 1338 aa23.18■■□□□ 1.3
PRPF40A-209ENST00000486100 KRT26Q7Z3Y9 468 aa23.18■■□□□ 1.3
PRPF40A-209ENST00000486100 FBXW7Q969H0 707 aa23.18■■□□□ 1.3
PRPF40A-209ENST00000486100 CD209Q9NNX6 404 aa23.18■■□□□ 1.3
PRPF40A-209ENST00000486100 NOB1Q9ULX3 412 aaKnown RBP23.18■■□□□ 1.3
PRPF40A-209ENST00000486100 MYO3BQ8WXR4 1341 aa23.17■■□□□ 1.3
PRPF40A-209ENST00000486100 WDR33Q9C0J8 1336 aaKnown RBP23.17■■□□□ 1.3
PRPF40A-209ENST00000486100 PLIN1O60240 522 aa23.17■■□□□ 1.3
PRPF40A-209ENST00000486100 SCARF1Q14162 830 aa23.17■■□□□ 1.3
PRPF40A-209ENST00000486100 ANKRD44Q8N8A2 993 aa23.17■■□□□ 1.3
PRPF40A-209ENST00000486100 MXD3Q9BW11 206 aa23.17■■□□□ 1.3
PRPF40A-209ENST00000486100 MYOZ2Q9NPC6 264 aa23.17■■□□□ 1.3
PRPF40A-209ENST00000486100 MMP14P50281 582 aa23.16■■□□□ 1.3
PRPF40A-209ENST00000486100 SAPCD2Q86UD0 394 aa23.16■■□□□ 1.3
PRPF40A-209ENST00000486100 ZNF408Q9H9D4 720 aa23.16■■□□□ 1.3
PRPF40A-209ENST00000486100 SPEF2Q9C093 1822 aa23.16■■□□□ 1.3
PRPF40A-209ENST00000486100 PCNTO95613 3336 aa23.16■■□□□ 1.3
PRPF40A-209ENST00000486100 ECE1P42892 770 aa23.15■■□□□ 1.3
PRPF40A-209ENST00000486100 RARSP54136 660 aaKnown RBP23.15■■□□□ 1.3
PRPF40A-209ENST00000486100 GTF2IP78347 998 aa23.15■■□□□ 1.3
PRPF40A-209ENST00000486100 DLK2Q6UY11 383 aa23.15■■□□□ 1.3
PRPF40A-209ENST00000486100 OGFOD1Q8N543 542 aa23.15■■□□□ 1.3
PRPF40A-209ENST00000486100 PUS3Q9BZE2 481 aaKnown RBP23.15■■□□□ 1.3
PRPF40A-209ENST00000486100 GGA3Q9NZ52 723 aa23.15■■□□□ 1.3
PRPF40A-209ENST00000486100 RIPOR2Q9Y4F9 1068 aa23.15■■□□□ 1.3
PRPF40A-209ENST00000486100 ASTN2O75129 1339 aaPredicted RBP23.14■■□□□ 1.3
PRPF40A-209ENST00000486100 UBE4AQ14139 1066 aa23.14■■□□□ 1.29
PRPF40A-209ENST00000486100 ZNF804AQ7Z570 1209 aa23.14■■□□□ 1.29
PRPF40A-209ENST00000486100 SULF1Q8IWU6 871 aa23.14■■□□□ 1.29
PRPF40A-209ENST00000486100 HHIPL1Q96JK4 782 aa23.14■■□□□ 1.29
PRPF40A-209ENST00000486100 CAPNS2Q96L46 248 aa23.14■■□□□ 1.29
PRPF40A-209ENST00000486100 API5Q9BZZ5 524 aaKnown RBP23.14■■□□□ 1.29
PRPF40A-209ENST00000486100 ADM5C9JUS6 153 aa23.13■■□□□ 1.29
PRPF40A-209ENST00000486100 IL1R1P14778 569 aa23.13■■□□□ 1.29
PRPF40A-209ENST00000486100 ANGEL2Q5VTE6 544 aaKnown RBP23.13■■□□□ 1.29
PRPF40A-209ENST00000486100 CYP4F22Q6NT55 531 aa23.13■■□□□ 1.29
PRPF40A-209ENST00000486100 PAXIP1Q6ZW49 1069 aaPredicted RBP23.13■■□□□ 1.29
PRPF40A-209ENST00000486100 WBP1LQ9NX94 342 aa23.12■■□□□ 1.29
PRPF40A-209ENST00000486100 MROH5Q6ZUA9 1318 aa23.11■■□□□ 1.29
PRPF40A-209ENST00000486100 COL13A1Q5TAT6 717 aaPredicted RBP23.11■■□□□ 1.29
PRPF40A-209ENST00000486100 IFFO2Q5TF58 517 aa23.11■■□□□ 1.29
PRPF40A-209ENST00000486100 ARHGAP45Q92619 1136 aa23.11■■□□□ 1.29
PRPF40A-209ENST00000486100 MAP2K1Q02750 393 aaPredicted RBP23.1■■□□□ 1.29
PRPF40A-209ENST00000486100 HDAC9Q9UKV0 1011 aa23.1■■□□□ 1.29
PRPF40A-209ENST00000486100 PITPNM2Q9BZ72 1349 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 GRM1Q13255 1194 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 NBPF9Q3BBW0 867 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 LRRC24Q50LG9 513 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 KIAA0825Q8IV33 1275 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 C2orf69Q8N8R5 385 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 AIDAQ96BJ3 306 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 GBA2Q9HCG7 927 aaPredicted RBP23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 PSME4Q14997 1843 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 TRPM7Q96QT4 1865 aa23.09■■□□□ 1.29
PRPF40A-209ENST00000486100 WNT10BO00744 389 aa23.08■■□□□ 1.29
PRPF40A-209ENST00000486100 FOXN1O15353 648 aa23.08■■□□□ 1.29
PRPF40A-209ENST00000486100 SASH1O94885 1247 aa23.08■■□□□ 1.29
PRPF40A-209ENST00000486100 FKBP1AP62942 108 aaKnown RBP23.08■■□□□ 1.29
PRPF40A-209ENST00000486100 KIF16BQ96L93 1317 aa23.08■■□□□ 1.28
PRPF40A-209ENST00000486100 UBTFL1P0CB47 393 aaPredicted RBP23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 HIBADHP31937 336 aaKnown RBP23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 MAP2K2P36507 400 aa23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 HUNKP57058 714 aa23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 METTL24Q5JXM2 366 aa23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 CERS5Q8N5B7 392 aa23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 KLHDC4Q8TBB5 520 aa23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 CDCA5Q96FF9 252 aa23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 FAM84BQ96KN1 310 aaPredicted RBP23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 HDAC5Q9UQL6 1122 aa23.07■■□□□ 1.28
PRPF40A-209ENST00000486100 GYG1P46976 350 aa23.06■■□□□ 1.28
PRPF40A-209ENST00000486100 RFX5P48382 616 aaPredicted RBP23.06■■□□□ 1.28
PRPF40A-209ENST00000486100 TDRD7Q8NHU6 1098 aaKnown RBP23.06■■□□□ 1.28
PRPF40A-209ENST00000486100 PDE8BO95263 885 aa23.05■■□□□ 1.28
PRPF40A-209ENST00000486100 CTCFP49711 727 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms