RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 PUM3Q15397 648 aaKnown RBP18.78■□□□□ 0.6
ABCF3-213ENST00000480539 NMRK2Q9NPI5 230 aa18.78■□□□□ 0.6
ABCF3-213ENST00000480539 KCNQ5Q9NR82 932 aa18.78■□□□□ 0.6
ABCF3-213ENST00000480539 ARAP2Q8WZ64 1704 aa18.77■□□□□ 0.6
ABCF3-213ENST00000480539 ZNF609O15014 1411 aa18.77■□□□□ 0.6
ABCF3-213ENST00000480539 CXCL9Q07325 125 aa18.77■□□□□ 0.6
ABCF3-213ENST00000480539 TFCP2Q12800 502 aa18.77■□□□□ 0.6
ABCF3-213ENST00000480539 OS9Q13438 667 aaPredicted RBP18.77■□□□□ 0.6
ABCF3-213ENST00000480539 CIAPIN1Q6FI81 312 aa18.77■□□□□ 0.6
ABCF3-213ENST00000480539 C15orf52Q6ZUT6 534 aaKnown RBP18.77■□□□□ 0.6
ABCF3-213ENST00000480539 SIRT2Q8IXJ6 389 aa18.77■□□□□ 0.6
ABCF3-213ENST00000480539 CEP126Q9P2H0 1117 aa18.77■□□□□ 0.6
ABCF3-213ENST00000480539 SURF6O75683 361 aaKnown RBP18.76■□□□□ 0.59
ABCF3-213ENST00000480539 IRX6P78412 446 aaPredicted RBP18.76■□□□□ 0.59
ABCF3-213ENST00000480539 G3BP1Q13283 466 aaKnown RBP eCLIP18.76■□□□□ 0.59
ABCF3-213ENST00000480539 ATP2B3Q16720 1220 aa18.76■□□□□ 0.59
ABCF3-213ENST00000480539 ZNF804AQ7Z570 1209 aa18.76■□□□□ 0.59
ABCF3-213ENST00000480539 RPAP2Q8IXW5 612 aaPredicted RBP18.76■□□□□ 0.59
ABCF3-213ENST00000480539 GPC2Q8N158 579 aa18.76■□□□□ 0.59
ABCF3-213ENST00000480539 FBXW7Q969H0 707 aa18.76■□□□□ 0.59
ABCF3-213ENST00000480539 COA1Q9GZY4 146 aa18.76■□□□□ 0.59
ABCF3-213ENST00000480539 ZNF646O15015 1829 aaPredicted RBP18.76■□□□□ 0.59
ABCF3-213ENST00000480539 PSME4Q14997 1843 aa18.76■□□□□ 0.59
ABCF3-213ENST00000480539 PSMD14O00487 310 aa18.75■□□□□ 0.59
ABCF3-213ENST00000480539 SLC5A1P13866 664 aa18.75■□□□□ 0.59
ABCF3-213ENST00000480539 FGFR2P21802 821 aa18.75■□□□□ 0.59
ABCF3-213ENST00000480539 GYG1P46976 350 aa18.75■□□□□ 0.59
ABCF3-213ENST00000480539 EXOC6BQ9Y2D4 811 aa18.75■□□□□ 0.59
ABCF3-213ENST00000480539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.75■□□□□ 0.59
ABCF3-213ENST00000480539 HMMRO75330 724 aa18.74■□□□□ 0.59
ABCF3-213ENST00000480539 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
ABCF3-213ENST00000480539 LPIN2Q92539 896 aa18.74■□□□□ 0.59
ABCF3-213ENST00000480539 RRAGCQ9HB90 399 aa18.74■□□□□ 0.59
ABCF3-213ENST00000480539 SASH1O94885 1247 aa18.73■□□□□ 0.59
ABCF3-213ENST00000480539 GMPSP49915 693 aaPredicted RBP18.73■□□□□ 0.59
ABCF3-213ENST00000480539 TNIP1Q15025 636 aa18.73■□□□□ 0.59
ABCF3-213ENST00000480539 PODNQ7Z5L7 613 aa18.73■□□□□ 0.59
ABCF3-213ENST00000480539 EXOC6Q8TAG9 804 aa18.73■□□□□ 0.59
ABCF3-213ENST00000480539 L3MBTL3Q96JM7 780 aaPredicted RBP18.73■□□□□ 0.59
ABCF3-213ENST00000480539 CD209Q9NNX6 404 aa18.73■□□□□ 0.59
ABCF3-213ENST00000480539 FAM84BQ96KN1 310 aaPredicted RBP18.72■□□□□ 0.59
ABCF3-213ENST00000480539 NOP58Q9Y2X3 529 aaKnown RBP18.72■□□□□ 0.59
ABCF3-213ENST00000480539 ZBTB12Q9Y330 459 aaPredicted RBP18.72■□□□□ 0.59
ABCF3-213ENST00000480539 USP17L3A6NCW0 530 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 USP17L4A6NCW7 530 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 POTECB2RU33 542 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 APBB1O00213 710 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 ADORA1P30542 326 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 HIBADHP31937 336 aaKnown RBP18.71■□□□□ 0.59
ABCF3-213ENST00000480539 BCAMP50895 628 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 SCNN1DP51172 638 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 CAVIN4Q5BKX8 364 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 USP17L1Q7RTZ2 530 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 VPS37DQ86XT2 251 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 IQSEC3Q9UPP2 1182 aaPredicted RBP18.71■□□□□ 0.59
ABCF3-213ENST00000480539 JAG2Q9Y219 1238 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 PCDHB15Q9Y5E8 787 aa18.71■□□□□ 0.59
ABCF3-213ENST00000480539 SCN4AP35499 1836 aa18.7■□□□□ 0.58
ABCF3-213ENST00000480539 A0A1B0GUL7 405 aa18.7■□□□□ 0.58
ABCF3-213ENST00000480539 KIF3CO14782 793 aa18.7■□□□□ 0.58
ABCF3-213ENST00000480539 IL1R1P14778 569 aa18.7■□□□□ 0.58
ABCF3-213ENST00000480539 GTF2IP78347 998 aa18.7■□□□□ 0.58
ABCF3-213ENST00000480539 MXD3Q9BW11 206 aa18.7■□□□□ 0.58
ABCF3-213ENST00000480539 HACL1Q9UJ83 578 aa18.7■□□□□ 0.58
ABCF3-213ENST00000480539 AKAP2Q9Y2D5 859 aa18.7■□□□□ 0.58
ABCF3-213ENST00000480539 SHTN1A0MZ66 631 aa18.69■□□□□ 0.58
ABCF3-213ENST00000480539 IQCA1LA6NCM1 817 aa18.69■□□□□ 0.58
ABCF3-213ENST00000480539 VIL1P09327 827 aaKnown RBP18.69■□□□□ 0.58
ABCF3-213ENST00000480539 LMOD1P29536 600 aaPredicted RBP18.69■□□□□ 0.58
ABCF3-213ENST00000480539 RSBN1LQ6PCB5 846 aaPredicted RBP18.69■□□□□ 0.58
ABCF3-213ENST00000480539 FBXO33Q7Z6M2 555 aa18.69■□□□□ 0.58
ABCF3-213ENST00000480539 COL1A1P02452 1464 aaPredicted RBP18.69■□□□□ 0.58
ABCF3-213ENST00000480539 VEGFAP15692 232 aaPredicted RBP18.68■□□□□ 0.58
ABCF3-213ENST00000480539 EPS15P42566 896 aa18.68■□□□□ 0.58
ABCF3-213ENST00000480539 TIMM10P62072 90 aa18.68■□□□□ 0.58
ABCF3-213ENST00000480539 DACT2Q5SW24 774 aa18.68■□□□□ 0.58
ABCF3-213ENST00000480539 ERC1Q8IUD2 1116 aa18.68■□□□□ 0.58
ABCF3-213ENST00000480539 NEUROD6Q96NK8 337 aa18.68■□□□□ 0.58
ABCF3-213ENST00000480539 MYH13Q9UKX3 1938 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 FRAT2O75474 233 aaPredicted RBP18.67■□□□□ 0.58
ABCF3-213ENST00000480539 PHKA1P46020 1223 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 CHAF1AQ13111 956 aaPredicted RBP18.67■□□□□ 0.58
ABCF3-213ENST00000480539 HSP90AB4PQ58FF6 505 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 TNNI3KQ59H18 835 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 STRIP1Q5VSL9 837 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 TTLL5Q6EMB2 1281 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 MICALL2Q8IY33 904 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 TDRD7Q8NHU6 1098 aaKnown RBP18.67■□□□□ 0.58
ABCF3-213ENST00000480539 XAGE2Q96GT9 111 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 TAF1DQ9H5J8 278 aaPredicted RBP18.67■□□□□ 0.58
ABCF3-213ENST00000480539 GPRC5DQ9NZD1 345 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 FPGT-TNNI3KV9GXZ4 949 aa18.67■□□□□ 0.58
ABCF3-213ENST00000480539 RPS12P25398 132 aaKnown RBP18.66■□□□□ 0.58
ABCF3-213ENST00000480539 EPHX2P34913 555 aa18.66■□□□□ 0.58
ABCF3-213ENST00000480539 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
ABCF3-213ENST00000480539 RHPN1Q8TCX5 695 aa18.66■□□□□ 0.58
ABCF3-213ENST00000480539 BCL11AQ9H165 835 aa18.66■□□□□ 0.58
ABCF3-213ENST00000480539 IL1RAPL2Q9NP60 686 aa18.66■□□□□ 0.58
ABCF3-213ENST00000480539 POTEIP0CG38 1075 aa18.65■□□□□ 0.58
ABCF3-213ENST00000480539 POTEJP0CG39 1038 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms