RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MAP4K3Q8IVH8 894 aa8.27□□□□□ -1.09
UBR3-209ENST00000477461 FSCN2O14926 492 aa8.26□□□□□ -1.09
UBR3-209ENST00000477461 PPP1R15AO75807 674 aaPredicted RBP8.26□□□□□ -1.09
UBR3-209ENST00000477461 ABL1P00519 1130 aa8.26□□□□□ -1.09
UBR3-209ENST00000477461 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
UBR3-209ENST00000477461 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
UBR3-209ENST00000477461 CACTIN-AS1Q8N1I8 211 aa8.26□□□□□ -1.09
UBR3-209ENST00000477461 KLHDC7BQ96G42 594 aa8.26□□□□□ -1.09
UBR3-209ENST00000477461 HHIPQ96QV1 700 aa8.26□□□□□ -1.09
UBR3-209ENST00000477461 SRA1Q9HD15 236 aaKnown RBP8.26□□□□□ -1.09
UBR3-209ENST00000477461 SALL4Q9UJQ4 1053 aa8.26□□□□□ -1.09
UBR3-209ENST00000477461 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
UBR3-209ENST00000477461 RPLP1P05386 114 aaKnown RBP8.25□□□□□ -1.09
UBR3-209ENST00000477461 PTPRAP18433 802 aa8.25□□□□□ -1.09
UBR3-209ENST00000477461 MZF1P28698 734 aaPredicted RBP8.25□□□□□ -1.09
UBR3-209ENST00000477461 ARTNQ5T4W7 220 aa8.25□□□□□ -1.09
UBR3-209ENST00000477461 FAM117BQ6P1L5 589 aa8.25□□□□□ -1.09
UBR3-209ENST00000477461 ACAD11Q709F0 780 aa8.25□□□□□ -1.09
UBR3-209ENST00000477461 UBL7Q96S82 380 aaPredicted RBP8.25□□□□□ -1.09
UBR3-209ENST00000477461 ZFP64Q9NPA5 681 aa8.25□□□□□ -1.09
UBR3-209ENST00000477461 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
UBR3-209ENST00000477461 XKR5Q6UX68 686 aa8.24□□□□□ -1.09
UBR3-209ENST00000477461 DZANK1Q9NVP4 752 aa8.24□□□□□ -1.09
UBR3-209ENST00000477461 NFKBIEO00221 500 aa8.23□□□□□ -1.09
UBR3-209ENST00000477461 DUOXA2Q1HG44 320 aa8.23□□□□□ -1.09
UBR3-209ENST00000477461 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.23□□□□□ -1.09
UBR3-209ENST00000477461 UBASH3BQ8TF42 649 aa8.23□□□□□ -1.09
UBR3-209ENST00000477461 SLC7A3Q8WY07 619 aa8.23□□□□□ -1.09
UBR3-209ENST00000477461 CHRDQ9H2X0 955 aa8.23□□□□□ -1.09
UBR3-209ENST00000477461 PDE2AO00408 941 aaPredicted RBP8.22□□□□□ -1.09
UBR3-209ENST00000477461 EREGO14944 169 aa8.22□□□□□ -1.09
UBR3-209ENST00000477461 HYAL3O43820 417 aaPredicted RBP8.22□□□□□ -1.09
UBR3-209ENST00000477461 ZNF211Q13398 564 aaPredicted RBP8.22□□□□□ -1.09
UBR3-209ENST00000477461 HGSNATQ68CP4 663 aa8.22□□□□□ -1.09
UBR3-209ENST00000477461 ALKBH2Q6NS38 261 aa8.22□□□□□ -1.09
UBR3-209ENST00000477461 DCAF11Q8TEB1 546 aa8.22□□□□□ -1.09
UBR3-209ENST00000477461 ADAM19Q9H013 955 aa8.22□□□□□ -1.09
UBR3-209ENST00000477461 CCDC87Q9NVE4 849 aa8.22□□□□□ -1.09
UBR3-209ENST00000477461 FOXD3Q9UJU5 478 aaPredicted RBP8.22□□□□□ -1.09
UBR3-209ENST00000477461 TM4SF5O14894 197 aa8.21□□□□□ -1.1
UBR3-209ENST00000477461 ADAM11O75078 769 aa8.21□□□□□ -1.1
UBR3-209ENST00000477461 CABP4P57796 275 aa8.21□□□□□ -1.1
UBR3-209ENST00000477461 KIAA1211Q6ZU35 1233 aa8.21□□□□□ -1.1
UBR3-209ENST00000477461 NBPF11Q86T75 865 aa8.21□□□□□ -1.1
UBR3-209ENST00000477461 SEC31BQ9NQW1 1179 aa8.21□□□□□ -1.1
UBR3-209ENST00000477461 PHACTR2O75167 634 aa8.2□□□□□ -1.1
UBR3-209ENST00000477461 TNFRSF21O75509 655 aa8.2□□□□□ -1.1
UBR3-209ENST00000477461 FAM13AO94988 1023 aa8.2□□□□□ -1.1
UBR3-209ENST00000477461 FSTP19883 344 aa8.2□□□□□ -1.1
UBR3-209ENST00000477461 NLRP12P59046 1061 aa8.2□□□□□ -1.1
UBR3-209ENST00000477461 FKBP4Q02790 459 aaKnown RBP eCLIP8.2□□□□□ -1.1
UBR3-209ENST00000477461 KLHL23Q8NBE8 558 aa8.2□□□□□ -1.1
UBR3-209ENST00000477461 FOXD4L4Q8WXT5 416 aaPredicted RBP8.2□□□□□ -1.1
UBR3-209ENST00000477461 OSMRQ99650 979 aa8.2□□□□□ -1.1
UBR3-209ENST00000477461 ARID3AQ99856 593 aa8.2□□□□□ -1.1
UBR3-209ENST00000477461 FZD6O60353 706 aa8.19□□□□□ -1.1
UBR3-209ENST00000477461 LRP8Q14114 963 aa8.19□□□□□ -1.1
UBR3-209ENST00000477461 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
UBR3-209ENST00000477461 RAXQ9Y2V3 346 aa8.19□□□□□ -1.1
UBR3-209ENST00000477461 H3BRJ5 948 aa8.18□□□□□ -1.1
UBR3-209ENST00000477461 POLR3DP05423 398 aaPredicted RBP8.18□□□□□ -1.1
UBR3-209ENST00000477461 Q6ZS46 218 aa8.18□□□□□ -1.1
UBR3-209ENST00000477461 ARMC10Q8N2F6 343 aa8.18□□□□□ -1.1
UBR3-209ENST00000477461 NXPE3Q969Y0 559 aa8.18□□□□□ -1.1
UBR3-209ENST00000477461 ZKSCAN3Q9BRR0 538 aa8.18□□□□□ -1.1
UBR3-209ENST00000477461 LATS2Q9NRM7 1088 aa8.18□□□□□ -1.1
UBR3-209ENST00000477461 STOML1Q9UBI4 398 aa8.18□□□□□ -1.1
UBR3-209ENST00000477461 MTMR7Q9Y216 660 aa8.18□□□□□ -1.1
UBR3-209ENST00000477461 NPR3P17342 541 aa8.17□□□□□ -1.1
UBR3-209ENST00000477461 SSTR4P31391 388 aa8.17□□□□□ -1.1
UBR3-209ENST00000477461 ASAP3Q8TDY4 903 aa8.17□□□□□ -1.1
UBR3-209ENST00000477461 UTP4Q969X6 686 aaKnown RBP8.17□□□□□ -1.1
UBR3-209ENST00000477461 RNF112Q9ULX5 631 aa8.17□□□□□ -1.1
UBR3-209ENST00000477461 SOX1O00570 391 aaPredicted RBP8.16□□□□□ -1.1
UBR3-209ENST00000477461 DHX15O43143 795 aaKnown RBP8.16□□□□□ -1.1
UBR3-209ENST00000477461 PIP4K2BP78356 416 aa8.16□□□□□ -1.1
UBR3-209ENST00000477461 SF3B2Q13435 895 aaKnown RBP8.16□□□□□ -1.1
UBR3-209ENST00000477461 CEP41Q9BYV8 373 aa8.16□□□□□ -1.1
UBR3-209ENST00000477461 SART1O43290 800 aaKnown RBP8.15□□□□□ -1.1
UBR3-209ENST00000477461 TMEM102Q8N9M5 508 aaPredicted RBP8.15□□□□□ -1.1
UBR3-209ENST00000477461 SOX13Q9UN79 622 aa8.15□□□□□ -1.1
UBR3-209ENST00000477461 HMX2A2RU54 273 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 METTL12A8MUP2 240 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 SUPT5HO00267 1087 aaKnown RBP8.14□□□□□ -1.11
UBR3-209ENST00000477461 EDN3P14138 238 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 USP5P45974 858 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 SERPINB4P48594 390 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 ARL4DP49703 201 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 IKBKEQ14164 716 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 TRIM42Q8IWZ5 723 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 SNX29Q8TEQ0 813 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 BSNDQ8WZ55 320 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 RUSC1Q9BVN2 902 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 OSGEPQ9NPF4 335 aa8.14□□□□□ -1.11
UBR3-209ENST00000477461 EHHADHQ08426 723 aa8.13□□□□□ -1.11
UBR3-209ENST00000477461 C19orf57Q0VDD7 668 aa8.13□□□□□ -1.11
UBR3-209ENST00000477461 VN1R5Q7Z5H4 357 aa8.13□□□□□ -1.11
UBR3-209ENST00000477461 FAM46AQ96IP4 442 aaKnown RBP8.13□□□□□ -1.11
UBR3-209ENST00000477461 USP26Q9BXU7 913 aa8.13□□□□□ -1.11
UBR3-209ENST00000477461 KCNF1Q9H3M0 494 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms