RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CHAC2Q8WUX2 184 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 RUNDC1Q96C34 613 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 ZNF512BQ96KM6 892 aaPredicted RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 RSRP1Q9BUV0 290 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 NOC4LQ9BVI4 516 aaKnown RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 CFHR5Q9BXR6 569 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 ZHX3Q9H4I2 956 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 SPON1Q9HCB6 807 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 MAP3K20Q9NYL2 800 aaKnown RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 CDV3Q9UKY7 258 aaKnown RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 EFR3BQ9Y2G0 817 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 MSRB2Q9Y3D2 182 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 MRVI1Q9Y6F6 885 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 LAMA2P24043 3122 aaKnown RBP3.64□□□□□ -1.83
HMGN4-202ENST00000477243 MYO18BQ8IUG5 2567 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 KAT6BQ8WYB5 2073 aa3.64□□□□□ -1.83
HMGN4-202ENST00000477243 UHRF1BP1Q6BDS2 1440 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 PPRC1Q5VV67 1664 aaKnown RBP3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CCDC163A0A0D9SF12 145 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 SMAPO00193 183 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 TBX3O15119 743 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 PDPK1O15530 556 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 KCNQ2O43526 872 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CPNE3O75131 537 aaKnown RBP3.63□□□□□ -1.83
HMGN4-202ENST00000477243 SEC24BO95487 1268 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 BPNT1O95861 308 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 RLBP1P12271 317 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CPEP16870 476 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 ATF3P18847 181 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CDC27P30260 824 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 ATN1P54259 1190 aaPredicted RBP3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CBLBQ13191 982 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 RASGRF1Q13972 1273 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 TTF1Q15361 905 aaPredicted RBP3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CT47A1Q5JQC4 288 aaPredicted RBP3.63□□□□□ -1.83
HMGN4-202ENST00000477243 COX20Q5RI15 118 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 MORN1Q5T089 497 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 TTC39BQ5VTQ0 682 aaPredicted RBP3.63□□□□□ -1.83
HMGN4-202ENST00000477243 EFCAB2Q5VUJ9 269 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 WWC2Q6AWC2 1192 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CHRDL2Q6WN34 429 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 SEPT12Q8IYM1 358 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 IFNL3Q8IZI9 196 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 HNRNPLLQ8WVV9 542 aaKnown RBP3.63□□□□□ -1.83
HMGN4-202ENST00000477243 SLC39A13Q96H72 371 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 ARPC5LQ9BPX5 153 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 OCSTAMPQ9BR26 566 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 SAP130Q9H0E3 1048 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 RBSNQ9H1K0 784 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CAAP1Q9H8G2 361 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 EVA1BQ9NVM1 165 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 ZNF358Q9NW07 568 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 MAP10Q9P2G4 905 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 ZNF69Q9UC07 566 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 POLIQ9UNA4 740 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 CHMP3Q9Y3E7 222 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 VCANP13611 3396 aa3.63□□□□□ -1.83
HMGN4-202ENST00000477243 ABCA12Q86UK0 2595 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 ZFHX2Q9C0A1 2572 aaPredicted RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 SETD1BQ9UPS6 1966 aaKnown RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 E2F8A0AVK6 867 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 ZRANB2O95218 330 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 RASGRP1O95267 797 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 PTMAP06454 111 aaKnown RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 JUNDP17535 347 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 SOX5P35711 763 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 CASP2P42575 452 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 TRAPPC10P48553 1259 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 CDKN1CP49918 316 aaPredicted RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 NFKB2Q00653 900 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 DNM1Q05193 864 aaKnown RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 TMEM95Q3KNT9 176 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 C2orf27AQ580R0 203 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 DALRD3Q5D0E6 543 aaKnown RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 SMAP1Q8IYB5 467 aaPredicted RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 CHPFQ8IZ52 775 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 TEX19Q8NA77 164 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 CXorf38Q8TB03 319 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 AIDAQ96BJ3 306 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 PRR14Q9BWN1 585 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 NT5C1AQ9BXI3 368 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 INO80BQ9C086 356 aaPredicted RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 NBPF3Q9H094 633 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 KANSL2Q9H9L4 492 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 KBTBD4Q9NVX7 518 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 PPP4R2Q9NY27 417 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 FAM13BQ9NYF5 915 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 SLC27A5Q9Y2P5 690 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 EIF4G3O43432 1585 aaKnown RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 ZDBF2Q9HCK1 2354 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 ERBB4Q15303 1308 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 WASHC2CQ9Y4E1 1318 aa3.62□□□□□ -1.83
HMGN4-202ENST00000477243 GCN1Q92616 2671 aaKnown RBP3.62□□□□□ -1.83
HMGN4-202ENST00000477243 ATP10DQ9P241 1426 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 UNC80Q8N2C7 3258 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 CFAP69A5D8W1 941 aa3.61□□□□□ -1.83
HMGN4-202ENST00000477243 WASLO00401 505 aaPredicted RBP3.61□□□□□ -1.83
HMGN4-202ENST00000477243 PPP1R12BO60237 982 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms