RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 RPS6KA4O75676 772 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 DXOO77932 396 aaKnown RBP7.07□□□□□ -1.28
HDAC8-216ENST00000470998 SLC19A1P41440 591 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 MMP16P51512 607 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 TUSC1Q2TAM9 212 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 MSL1Q68DK7 614 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 AEBP1Q8IUX7 1158 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 NLGN2Q8NFZ4 835 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 NUDT12Q9BQG2 462 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 KDM6AO15550 1401 aaPredicted RBP7.07□□□□□ -1.28
HDAC8-216ENST00000470998 TOGARAM1Q9Y4F4 1720 aa7.07□□□□□ -1.28
HDAC8-216ENST00000470998 C5P01031 1676 aa7.06□□□□□ -1.28
HDAC8-216ENST00000470998 GNAT3A8MTJ3 354 aa7.06□□□□□ -1.28
HDAC8-216ENST00000470998 IGHDP01880 384 aa7.06□□□□□ -1.28
HDAC8-216ENST00000470998 TGFB2P61812 414 aa7.06□□□□□ -1.28
HDAC8-216ENST00000470998 INTS3Q68E01 1043 aaKnown RBP7.06□□□□□ -1.28
HDAC8-216ENST00000470998 TMEM57Q8N5G2 664 aa7.06□□□□□ -1.28
HDAC8-216ENST00000470998 ZBTB7BO15156 539 aaPredicted RBP7.05□□□□□ -1.28
HDAC8-216ENST00000470998 RNMTO43148 476 aaKnown RBP7.05□□□□□ -1.28
HDAC8-216ENST00000470998 RFC4P35249 363 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 BECN1Q14457 450 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 QPCTQ16769 361 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 DESI1Q6ICB0 168 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 AMIGO3Q86WK7 504 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 NFATC2IPQ8NCF5 419 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 SLC4A9Q96Q91 983 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 STK31Q9BXU1 1019 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 SLC52A2Q9HAB3 445 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 TSPYL4Q9UJ04 414 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 LAS1LQ9Y4W2 734 aaKnown RBP7.05□□□□□ -1.28
HDAC8-216ENST00000470998 ITGB4P16144 1822 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 TUBGCP6Q96RT7 1819 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 ZNF831Q5JPB2 1677 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 CEMIPQ8WUJ3 1361 aa7.05□□□□□ -1.28
HDAC8-216ENST00000470998 TAF1LQ8IZX4 1826 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 LILRB3O75022 631 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 HMMRO75330 724 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 CD2BP2O95400 341 aaKnown RBP7.04□□□□□ -1.28
HDAC8-216ENST00000470998 MMP10P09238 476 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 CCNYL3P0C7X3 344 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 GYS1P13807 737 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 YBX3P16989 372 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC8-216ENST00000470998 CRKLP46109 303 aaKnown RBP7.04□□□□□ -1.28
HDAC8-216ENST00000470998 RGS3P49796 1198 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 CCT4P50991 539 aaKnown RBP7.04□□□□□ -1.28
HDAC8-216ENST00000470998 NUCB1Q02818 461 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 PTPRNQ16849 979 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 MTHFSDQ2M296 383 aaKnown RBP7.04□□□□□ -1.28
HDAC8-216ENST00000470998 RPAP2Q8IXW5 612 aaPredicted RBP7.04□□□□□ -1.28
HDAC8-216ENST00000470998 CCDC87Q9NVE4 849 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 PDZRN3Q9UPQ7 1066 aa7.04□□□□□ -1.28
HDAC8-216ENST00000470998 IBTKQ9P2D0 1353 aaPredicted RBP7.04□□□□□ -1.28
HDAC8-216ENST00000470998 CFAP99D6REC4 459 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 PTCD1O75127 700 aaKnown RBP7.03□□□□□ -1.28
HDAC8-216ENST00000470998 GIGYF1O75420 1035 aaPredicted RBP7.03□□□□□ -1.28
HDAC8-216ENST00000470998 CTHP32929 405 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 C1QTNF8P60827 252 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 BMP2KLQ5H9B9 411 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 CCDC30Q5VVM6 783 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 TSPYL6Q8N831 410 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 C8orf58Q8NAV2 365 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 THUMPD2Q9BTF0 503 aaKnown RBP7.03□□□□□ -1.28
HDAC8-216ENST00000470998 GOPCQ9HD26 462 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 PARP3Q9Y6F1 533 aa7.03□□□□□ -1.28
HDAC8-216ENST00000470998 USP42Q9H9J4 1324 aaKnown RBP7.02□□□□□ -1.28
HDAC8-216ENST00000470998 UBR3Q6ZT12 1888 aa7.02□□□□□ -1.28
HDAC8-216ENST00000470998 RPIAP49247 311 aa7.02□□□□□ -1.29
HDAC8-216ENST00000470998 TAF7Q15545 349 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-216ENST00000470998 PLA2G2CQ5R387 149 aa7.02□□□□□ -1.29
HDAC8-216ENST00000470998 ZNF697Q5TEC3 545 aa7.02□□□□□ -1.29
HDAC8-216ENST00000470998 SMIM5Q71RC9 77 aa7.02□□□□□ -1.29
HDAC8-216ENST00000470998 CHD1LQ86WJ1 897 aa7.02□□□□□ -1.29
HDAC8-216ENST00000470998 PROCA1Q8NCQ7 364 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-216ENST00000470998 TEX13AQ9BXU3 409 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-216ENST00000470998 LGR6Q9HBX8 967 aa7.02□□□□□ -1.29
HDAC8-216ENST00000470998 HDAC5Q9UQL6 1122 aa7.02□□□□□ -1.29
HDAC8-216ENST00000470998 MRC1P22897 1456 aa7.02□□□□□ -1.29
HDAC8-216ENST00000470998 C10orf71Q711Q0 1435 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 CHD4Q14839 1912 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 A0A087WZG4 1122 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 STARD3NLO95772 234 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 GNAI3P08754 354 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 CYP19A1P11511 503 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-216ENST00000470998 TEFQ10587 303 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 RTL5Q5HYW3 569 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-216ENST00000470998 INTS5Q6P9B9 1019 aaKnown RBP7.01□□□□□ -1.29
HDAC8-216ENST00000470998 LIAT1Q6ZQX7 453 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 MCM10Q7L590 875 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 TTC5Q8N0Z6 440 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 TBC1D32Q96NH3 1257 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 IRX2Q9BZI1 471 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-216ENST00000470998 TNNQ9UQP3 1299 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 CICQ96RK0 1608 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-216ENST00000470998 ATP10DQ9P241 1426 aa7.01□□□□□ -1.29
HDAC8-216ENST00000470998 ADCY9O60503 1353 aa7□□□□□ -1.29
HDAC8-216ENST00000470998 AP1G2O75843 785 aa7□□□□□ -1.29
HDAC8-216ENST00000470998 TRIM32Q13049 653 aa7□□□□□ -1.29
HDAC8-216ENST00000470998 DCTN1Q14203 1278 aa7□□□□□ -1.29
HDAC8-216ENST00000470998 SPRYD7Q5W111 196 aa7□□□□□ -1.29
HDAC8-216ENST00000470998 NPM2Q86SE8 214 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms