RNA–Protein interactions for RNA: ENST00000460797.5

ITGB5-202, Transcript of integrin subunit beta 5, humanhuman

TSL 2

Gene ITGB5, Length 2,228 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-202ENST00000460797 USP54Q70EL1 1684 aa14.25□□□□□ -0.13
ITGB5-202ENST00000460797 LAMA4Q16363 1823 aa14.25□□□□□ -0.13
ITGB5-202ENST00000460797 SOX12O15370 315 aa14.25□□□□□ -0.13
ITGB5-202ENST00000460797 HSP90B1P14625 803 aaKnown RBP14.25□□□□□ -0.13
ITGB5-202ENST00000460797 ADALQ6DHV7 355 aa14.25□□□□□ -0.13
ITGB5-202ENST00000460797 HOMER1Q86YM7 354 aa14.25□□□□□ -0.13
ITGB5-202ENST00000460797 SMARCE1Q969G3 411 aa14.25□□□□□ -0.13
ITGB5-202ENST00000460797 FTOQ9C0B1 505 aaKnown RBP eCLIP14.25□□□□□ -0.13
ITGB5-202ENST00000460797 TMX1Q9H3N1 280 aa14.25□□□□□ -0.13
ITGB5-202ENST00000460797 EFCC1Q9HA90 598 aa14.25□□□□□ -0.13
ITGB5-202ENST00000460797 NEDD4P46934 1319 aa14.24□□□□□ -0.13
ITGB5-202ENST00000460797 SALL1Q9NSC2 1324 aa14.24□□□□□ -0.13
ITGB5-202ENST00000460797 DPCR1Q3MIW9 517 aa14.24□□□□□ -0.13
ITGB5-202ENST00000460797 CC2D1AQ6P1N0 951 aaPredicted RBP14.24□□□□□ -0.13
ITGB5-202ENST00000460797 NFATC2IPQ8NCF5 419 aa14.24□□□□□ -0.13
ITGB5-202ENST00000460797 PARP3Q9Y6F1 533 aa14.24□□□□□ -0.13
ITGB5-202ENST00000460797 UTYO14607 1347 aa14.24□□□□□ -0.13
ITGB5-202ENST00000460797 COL15A1P39059 1388 aa14.24□□□□□ -0.13
ITGB5-202ENST00000460797 IKBKBO14920 756 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 POLR3GO15318 223 aaPredicted RBP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 OAS2P29728 719 aaKnown RBP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 ME1P48163 572 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 G3BP1Q13283 466 aaKnown RBP eCLIP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 NCAPHQ15003 741 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 GPR161Q8N6U8 529 aaKnown RBP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 C9orf78Q9NZ63 289 aaPredicted RBP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 RTEL1Q9NZ71 1219 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 CWC15Q9P013 229 aaKnown RBP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 SASH3O75995 380 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 CTDNEP1O95476 244 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 HMGB1P09429 215 aaKnown RBP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 NLRP12P59046 1061 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 ST5P78524 1137 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 KRBA2Q6ZNG9 492 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 ILDR1Q86SU0 546 aaPredicted RBP14.23□□□□□ -0.13
ITGB5-202ENST00000460797 REXO1L1PQ8IX06 675 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 IQUBQ8NA54 791 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 EXOC4Q96A65 974 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 MPHOSPH8Q99549 860 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 SDF4Q9BRK5 362 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 BOLA2Q9H3K6 86 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 PCDHA7Q9UN72 937 aa14.23□□□□□ -0.13
ITGB5-202ENST00000460797 PTPDC1A2A3K4 754 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 FANCGO15287 622 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 EVCP57679 992 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 SMC1AQ14683 1233 aaKnown RBP14.22□□□□□ -0.13
ITGB5-202ENST00000460797 ZRSR1Q15695 479 aaKnown RBP14.22□□□□□ -0.13
ITGB5-202ENST00000460797 CARD6Q9BX69 1037 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 AGXT2Q9BYV1 514 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 CCDC8Q9H0W5 538 aaPredicted RBP14.22□□□□□ -0.13
ITGB5-202ENST00000460797 RASSF4Q9H2L5 321 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 TLR7Q9NYK1 1049 aaKnown RBP14.22□□□□□ -0.13
ITGB5-202ENST00000460797 MARF1Q9Y4F3 1742 aaKnown RBP14.22□□□□□ -0.13
ITGB5-202ENST00000460797 SEC31AO94979 1220 aaKnown RBP14.22□□□□□ -0.13
ITGB5-202ENST00000460797 ZSCAN26Q16670 478 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 GORABQ5T7V8 394 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 GOLGA5Q8TBA6 731 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 SYTL4Q96C24 671 aaPredicted RBP14.22□□□□□ -0.13
ITGB5-202ENST00000460797 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 AK7Q96M32 723 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 TRERF1Q96PN7 1200 aa14.22□□□□□ -0.13
ITGB5-202ENST00000460797 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.22□□□□□ -0.13
ITGB5-202ENST00000460797 ZSCAN12O43309 604 aa14.21□□□□□ -0.13
ITGB5-202ENST00000460797 URI1O94763 535 aaPredicted RBP14.21□□□□□ -0.13
ITGB5-202ENST00000460797 FANCCQ00597 558 aa14.21□□□□□ -0.13
ITGB5-202ENST00000460797 GOLGA6L9A6NEM1 432 aa14.21□□□□□ -0.14
ITGB5-202ENST00000460797 CBFA2T2O43439 604 aa14.21□□□□□ -0.14
ITGB5-202ENST00000460797 MYO1BO43795 1136 aa14.21□□□□□ -0.14
ITGB5-202ENST00000460797 CYP21A2P08686 494 aa14.21□□□□□ -0.14
ITGB5-202ENST00000460797 HOXC9P31274 260 aa14.21□□□□□ -0.14
ITGB5-202ENST00000460797 KSR2Q6VAB6 950 aa14.21□□□□□ -0.14
ITGB5-202ENST00000460797 RSRC2Q7L4I2 434 aaKnown RBP14.21□□□□□ -0.14
ITGB5-202ENST00000460797 FBXO18Q8NFZ0 1043 aa14.21□□□□□ -0.14
ITGB5-202ENST00000460797 ERCC4Q92889 916 aaPredicted RBP14.21□□□□□ -0.14
ITGB5-202ENST00000460797 DBF4Q9UBU7 674 aaPredicted RBP14.21□□□□□ -0.14
ITGB5-202ENST00000460797 NDUFA8P51970 172 aa14.2□□□□□ -0.14
ITGB5-202ENST00000460797 MAP3K9P80192 1104 aa14.2□□□□□ -0.14
ITGB5-202ENST00000460797 JAKMIP3Q5VZ66 844 aa14.2□□□□□ -0.14
ITGB5-202ENST00000460797 KCNG4Q8TDN1 519 aa14.2□□□□□ -0.14
ITGB5-202ENST00000460797 RABGGTAQ92696 567 aa14.2□□□□□ -0.14
ITGB5-202ENST00000460797 KAZALD1Q96I82 304 aa14.2□□□□□ -0.14
ITGB5-202ENST00000460797 MAP3K2Q9Y2U5 619 aa14.2□□□□□ -0.14
ITGB5-202ENST00000460797 LMO7Q8WWI1 1683 aa14.2□□□□□ -0.14
ITGB5-202ENST00000460797 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.19□□□□□ -0.14
ITGB5-202ENST00000460797 YEATS4O95619 227 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 ATP5JP18859 108 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 DHX32Q7L7V1 743 aaKnown RBP14.19□□□□□ -0.14
ITGB5-202ENST00000460797 LINC00301Q8NCQ3 95 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 HSD3B7Q9H2F3 369 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 ARFGAP3Q9NP61 516 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 ATG3Q9NT62 314 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 ZNF609O15014 1411 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 A0A1B0GVL5 298 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 KDM4FA0A1W2PPD8 638 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 MYO1CO00159 1063 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 SLC3A2P08195 630 aaKnown RBP14.19□□□□□ -0.14
ITGB5-202ENST00000460797 CCDC191Q8NCU4 936 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 SUCLG2Q96I99 432 aa14.19□□□□□ -0.14
ITGB5-202ENST00000460797 FUT8Q9BYC5 575 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms