RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 SYT1P21579 422 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 GBP2P32456 591 aaPredicted RBP13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 PRPF4BQ13523 1007 aaKnown RBP13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 ZC3H12CQ9C0D7 883 aaKnown RBP13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 TRIM35Q9UPQ4 493 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 TCOF1Q13428 1488 aaKnown RBP13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 ABCC1P33527 1531 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 IFFO1Q0D2I5 559 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 INTS4Q96HW7 963 aaKnown RBP13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 ORAI2Q96SN7 254 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 LGR6Q9HBX8 967 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 JADE2Q9NQC1 790 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 RMND1Q9NWS8 449 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 CEP135Q66GS9 1140 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 RUFY3Q7L099 469 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 DYDC1Q8WWB3 177 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 ALS2CR12Q96Q35 445 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 EZRP15311 586 aaKnown RBP13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 NAPAP54920 295 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 DHX58Q96C10 678 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 SPAG5Q96R06 1193 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 PLCD4Q9BRC7 762 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 LRRC27Q9C0I9 530 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 JAG2Q9Y219 1238 aa13.41□□□□□ -0.26
SMARCAD1-204ENST00000457823 CCDC171Q6TFL3 1326 aa13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 TBCAO75347 108 aaKnown RBP13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 ZFYVE9O95405 1425 aa13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 MCM3P25205 808 aa13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 CGNQ9P2M7 1197 aaKnown RBP13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 TYRO3Q06418 890 aa13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 NOLC1Q14978 699 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 OGFOD1Q8N543 542 aa13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 GOPCQ9HD26 462 aa13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 PRDM10Q9NQV6 1147 aa13.4□□□□□ -0.26
SMARCAD1-204ENST00000457823 RTCBQ9Y3I0 505 aaKnown RBP13.4□□□□□ -0.27
SMARCAD1-204ENST00000457823 TEX14Q8IWB6 1497 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 WDHD1O75717 1129 aaPredicted RBP13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 MYCNP04198 464 aaPredicted RBP13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 GNAT2P19087 354 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 DBNDD2Q9BQY9 259 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 A0A1B0GUL7 405 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 ASIC1P78348 528 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 SPAG1Q07617 926 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 ERMNQ8TAM6 284 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 MMRN2Q9H8L6 949 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 EYA2O00167 538 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 PSMA7O14818 248 aa13.39□□□□□ -0.27
SMARCAD1-204ENST00000457823 RNF216Q9NWF9 866 aaPredicted RBP13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 BCCIPQ9P287 314 aaKnown RBP eCLIP13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 DNAI1Q9UI46 699 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 ZNF804AQ7Z570 1209 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 NAA15Q9BXJ9 866 aaKnown RBP13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 NYXQ9GZU5 481 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 BTG4Q9NY30 223 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 PTGS1P23219 599 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 CALML3P27482 149 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 PAXBP1Q9Y5B6 917 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 RAD50Q92878 1312 aa13.38□□□□□ -0.27
SMARCAD1-204ENST00000457823 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 A1BGP04217 495 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 METTL22Q9BUU2 404 aaPredicted RBP13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 WWC3Q9ULE0 1092 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 PZPP20742 1482 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 CALM1P0DP23 149 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 CALM2P0DP24 149 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 CALM3P0DP25 149 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 CTNNA2P26232 953 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 STX17P56962 302 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 PRIMPOLQ96LW4 560 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 PNMA6EA0A0J9YXQ4 647 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 MBD4O95243 580 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 PLBD2Q8NHP8 589 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 C6orf50Q9HD87 102 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 NPC1L1Q9UHC9 1359 aa13.37□□□□□ -0.27
SMARCAD1-204ENST00000457823 ITSN2Q9NZM3 1697 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 SHTN1A0MZ66 631 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 CCDC174Q6PII3 467 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 PUF60Q9UHX1 559 aaKnown RBP13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.36□□□□□ -0.271e-6■■■■□ 22
SMARCAD1-204ENST00000457823 HOOK3Q86VS8 718 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 ZKSCAN5Q9Y2L8 839 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 UHRF1BP1Q6BDS2 1440 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 TNNI2P48788 182 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 TRAF1Q13077 416 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 ZNF594Q96JF6 807 aaPredicted RBP13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 PCDH11XQ9BZA7 1347 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 PCDH11YQ9BZA8 1340 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 LDHBP07195 334 aaKnown RBP13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 CYLC1P35663 651 aaPredicted RBP13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 MAP2K1Q02750 393 aaPredicted RBP13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 TNNI3KQ59H18 835 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 COL17A1Q9UMD9 1497 aaPredicted RBP13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 FPGT-TNNI3KV9GXZ4 949 aa13.36□□□□□ -0.27
SMARCAD1-204ENST00000457823 USP19O94966 1318 aa13.35□□□□□ -0.27
SMARCAD1-204ENST00000457823 SH3TC1Q8TE82 1336 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms