RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 ZNF213O14771 459 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 CHRNA2Q15822 529 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 MLH3Q9UHC1 1453 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
ITGB4-202ENST00000449880 HOXC9P31274 260 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 SYT10Q6XYQ8 523 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 ERCC6L2Q5T890 1561 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 MINDY4BA8MYZ0 360 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 N4BP3O15049 544 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 SLC5A1P13866 664 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 DNM1Q05193 864 aaKnown RBP15.85■□□□□ 0.13
ITGB4-202ENST00000449880 RBM28Q9NW13 759 aaKnown RBP15.85■□□□□ 0.13
ITGB4-202ENST00000449880 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 MSH6P52701 1360 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 SNRPA1P09661 255 aaKnown RBP15.85■□□□□ 0.13
ITGB4-202ENST00000449880 IQCA1Q86XH1 822 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 AFAP1L1Q8TED9 768 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 ANXA1P04083 346 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 KRT86O43790 486 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 ZNF444Q8N0Y2 327 aaPredicted RBP15.85■□□□□ 0.13
ITGB4-202ENST00000449880 ZSWIM4Q9H7M6 989 aa15.85■□□□□ 0.13
ITGB4-202ENST00000449880 ORC3Q9UBD5 711 aaPredicted RBP15.85■□□□□ 0.13
ITGB4-202ENST00000449880 PRDM15P57071 1507 aaPredicted RBP15.84■□□□□ 0.13
ITGB4-202ENST00000449880 DMTNQ08495 405 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 TMEM266Q2M3C6 531 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 GUCY1B3Q02153 619 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 SELENOOQ9BVL4 669 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 USP26Q9BXU7 913 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 DMRT2Q9Y5R5 561 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 ERVK-7P63135 1459 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 EVCP57679 992 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 CUL5Q93034 780 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 RASAL2Q9UJF2 1139 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 USP16Q9Y5T5 823 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 IQGAP3Q86VI3 1631 aa15.84■□□□□ 0.13
ITGB4-202ENST00000449880 GSTTP1A0A1W2PQM5 241 aa15.83■□□□□ 0.13
ITGB4-202ENST00000449880 IARSP41252 1262 aaKnown RBP15.83■□□□□ 0.13
ITGB4-202ENST00000449880 SCLT1Q96NL6 688 aa15.83■□□□□ 0.13
ITGB4-202ENST00000449880 U2AF2P26368 475 aaKnown RBP eCLIP15.83■□□□□ 0.13
ITGB4-202ENST00000449880 PPP2R3AQ06190 1150 aa15.83■□□□□ 0.13
ITGB4-202ENST00000449880 ATRIPQ8WXE1 791 aa15.83■□□□□ 0.13
ITGB4-202ENST00000449880 DCTPP1Q9H773 170 aa15.83■□□□□ 0.13
ITGB4-202ENST00000449880 TRMT112Q9UI30 125 aaKnown RBP15.83■□□□□ 0.13
ITGB4-202ENST00000449880 RAD50Q92878 1312 aa15.83■□□□□ 0.12
ITGB4-202ENST00000449880 KRT24Q2M2I5 525 aa15.83■□□□□ 0.12
ITGB4-202ENST00000449880 TSHZ3Q63HK5 1081 aa15.83■□□□□ 0.12
ITGB4-202ENST00000449880 LRRC59Q96AG4 307 aaKnown RBP15.83■□□□□ 0.12
ITGB4-202ENST00000449880 EHMT1Q9H9B1 1298 aa15.83■□□□□ 0.12
ITGB4-202ENST00000449880 SSR1P43307 286 aaKnown RBP15.83■□□□□ 0.12
ITGB4-202ENST00000449880 ATP8B2P98198 1209 aa15.83■□□□□ 0.12
ITGB4-202ENST00000449880 RPGRQ92834 1020 aaKnown RBP15.83■□□□□ 0.12
ITGB4-202ENST00000449880 TSGA10Q9BZW7 698 aa15.83■□□□□ 0.12
ITGB4-202ENST00000449880 MYO1BO43795 1136 aa15.83■□□□□ 0.12
ITGB4-202ENST00000449880 PRPHP41219 470 aa15.83■□□□□ 0.12
ITGB4-202ENST00000449880 CPSF2Q9P2I0 782 aaKnown RBP15.83■□□□□ 0.12
ITGB4-202ENST00000449880 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 ANKRD18BA2A2Z9 1011 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 DHX37Q8IY37 1157 aaKnown RBP15.82■□□□□ 0.12
ITGB4-202ENST00000449880 TEX13AQ9BXU3 409 aaPredicted RBP15.82■□□□□ 0.12
ITGB4-202ENST00000449880 HECW2Q9P2P5 1572 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 TTC41PQ6P2S7 1318 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 TMEM2Q9UHN6 1383 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 KIF1BO60333 1816 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 DNAJC21Q5F1R6 531 aaKnown RBP15.82■□□□□ 0.12
ITGB4-202ENST00000449880 CCDC114Q96M63 670 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.82■□□□□ 0.12
ITGB4-202ENST00000449880 SBNO1A3KN83 1393 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 ARHGAP25P42331 645 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 RHPN1Q8TCX5 695 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 GTF3C6Q969F1 213 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 KIF5BP33176 963 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 NCOA7Q8NI08 942 aa15.82■□□□□ 0.12
ITGB4-202ENST00000449880 CCDC172P0C7W6 258 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 ZBTB3Q9H5J0 574 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 CROCC2H7BZ55 1655 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 KIF4AO95239 1232 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 CNGA4Q8IV77 575 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 IP6K1Q92551 441 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 FSD2A1L4K1 749 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 EXOC5O00471 708 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 CCT2P78371 535 aaKnown RBP15.81■□□□□ 0.12
ITGB4-202ENST00000449880 CWC25Q9NXE8 425 aaPredicted RBP15.81■□□□□ 0.12
ITGB4-202ENST00000449880 TET3O43151 1660 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 ZNF75DP51815 510 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 CCDC96Q2M329 555 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 CEP85Q6P2H3 762 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 BRAPQ7Z569 592 aa15.81■□□□□ 0.12
ITGB4-202ENST00000449880 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.81■□□□□ 0.12
ITGB4-202ENST00000449880 ATP5J2-PTCD1G3V325 749 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 SEC24BO95487 1268 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 VAV2P52735 878 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 TRIM14Q14142 442 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 ANKRD13DQ6ZTN6 518 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 SIRT1Q96EB6 747 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 ALDH1L1O75891 902 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 TTF1Q15361 905 aaPredicted RBP15.8■□□□□ 0.12
ITGB4-202ENST00000449880 C19orf44Q9H6X5 657 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 LDHCP07864 332 aa15.8■□□□□ 0.12
ITGB4-202ENST00000449880 METAP2P50579 478 aaKnown RBP eCLIP15.8■□□□□ 0.12
ITGB4-202ENST00000449880 CCDC6Q16204 474 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms