RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 ZMYM4Q5VZL5 1548 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 RANBP1P43487 201 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 PSME1Q06323 249 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 PSMD2Q13200 908 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 SSH1Q8WYL5 1049 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 ORC3Q9UBD5 711 aaPredicted RBP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 UHRF1BP1LA0JNW5 1464 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 CETN3O15182 167 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 DNAJC8O75937 253 aaPredicted RBP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 LRMPQ12912 555 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 ZNF710Q8N1W2 664 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 CEP63Q96MT8 703 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 USP26Q9BXU7 913 aa5.85□□□□□ -1.47
SCN11A-202ENST00000444237 LARSQ9P2J5 1176 aaKnown RBP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 TPX2Q9ULW0 747 aaKnown RBP5.85□□□□□ -1.47
SCN11A-202ENST00000444237 A2MP01023 1474 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 SURF6O75683 361 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 RPSAP08865 295 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 MTHFSP49914 203 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 KARSQ15046 597 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 TMEM132EQ6IEE7 984 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 NFXL1Q6ZNB6 911 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 RNF10Q8N5U6 811 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 CCDC155Q8N6L0 562 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 ZNF513Q8N8E2 541 aaPredicted RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 CHCHD3Q9NX63 227 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 TTF2Q9UNY4 1162 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 FAN1Q9Y2M0 1017 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 ZFYVE16Q7Z3T8 1539 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 HIP1RO75146 1068 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 SEC31AO94979 1220 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 CPLX3Q8WVH0 158 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 ANAPC4Q9UJX5 808 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 ABCA8O94911 1581 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 ABCC10Q5T3U5 1492 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 LMTK3Q96Q04 1460 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 TNRQ92752 1358 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 CYLC1P35663 651 aaPredicted RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 CRYMQ14894 314 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 SETDB1Q15047 1291 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 CCDC57Q2TAC2 916 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 FCHSD1Q86WN1 690 aa5.84□□□□□ -1.47
SCN11A-202ENST00000444237 MRPS27Q92552 414 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 SEC62Q99442 399 aaKnown RBP5.84□□□□□ -1.47
SCN11A-202ENST00000444237 KRT86O43790 486 aa5.84□□□□□ -1.48
SCN11A-202ENST00000444237 TACC1O75410 805 aa5.84□□□□□ -1.48
SCN11A-202ENST00000444237 CDKL5O76039 1030 aa5.84□□□□□ -1.48
SCN11A-202ENST00000444237 EVA1CP58658 441 aa5.84□□□□□ -1.48
SCN11A-202ENST00000444237 KRT83P78385 493 aa5.84□□□□□ -1.48
SCN11A-202ENST00000444237 RAB11FIP4Q86YS3 637 aa5.84□□□□□ -1.48
SCN11A-202ENST00000444237 TAOK3Q9H2K8 898 aa5.84□□□□□ -1.48
SCN11A-202ENST00000444237 MYO5CQ9NQX4 1742 aa5.84□□□□□ -1.48
SCN11A-202ENST00000444237 BIN1O00499 593 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 RAB11FIP3O75154 756 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 HSPA2P54652 639 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 CCDC65Q8IXS2 484 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 OSBPL9Q96SU4 736 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 BICC1Q9H694 974 aaKnown RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 LZTFL1Q9NQ48 299 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 KDM6BO15054 1643 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 RPRD2Q5VT52 1461 aaKnown RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 MYO1BO43795 1136 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 APBA1Q02410 837 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 CAPRIN2Q6IMN6 1127 aaKnown RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 CLEC17AQ6ZS10 378 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 SUGP1Q8IWZ8 645 aaKnown RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 SPDL1Q96EA4 605 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 LTV1Q96GA3 475 aaPredicted RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 SLC52A1Q9NWF4 448 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 USP16Q9Y5T5 823 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 KDM5BQ9UGL1 1544 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 E7EVH7 732 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 FYB1O15117 783 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 RNF40O75150 1001 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 GADD45BO75293 160 aaPredicted RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 E2F5Q15329 346 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 PPP1R7Q15435 360 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 CWC27Q6UX04 472 aaKnown RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 RUFY4Q6ZNE9 571 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 C9orf78Q9NZ63 289 aaPredicted RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 FAM169AQ9Y6X4 670 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 SDSP20132 328 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 MATR3P43243 847 aaKnown RBP eCLIP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 CCDC178Q5BJE1 867 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 ESCO1Q5FWF5 840 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 STMN2Q93045 179 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 CEP131Q9UPN4 1083 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 PPP1R12BO60237 982 aaPredicted RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 CORO7P57737 925 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 SPAG1Q07617 926 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 RBM26Q5T8P6 1007 aaKnown RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 PRPF40BQ6NWY9 871 aaKnown RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 ARMC9Q7Z3E5 817 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 NAP1L3Q99457 506 aaPredicted RBP5.83□□□□□ -1.48
SCN11A-202ENST00000444237 ANKRD30BQ9BXX2 1392 aa5.83□□□□□ -1.48
SCN11A-202ENST00000444237 ERICH2A1L162 156 aa5.82□□□□□ -1.48
SCN11A-202ENST00000444237 GYS2P54840 703 aa5.82□□□□□ -1.48
SCN11A-202ENST00000444237 AIMP1Q12904 312 aaKnown RBP5.82□□□□□ -1.48
SCN11A-202ENST00000444237 FKBP15Q5T1M5 1219 aa5.82□□□□□ -1.48
SCN11A-202ENST00000444237 KANK3Q6NY19 840 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms