RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 NBPF26B4DH59 902 aa16.9■□□□□ 0.3
MSH5-206ENST00000423982 NBPF14Q5TI25 921 aa16.9■□□□□ 0.3
MSH5-206ENST00000423982 NBPF10Q6P3W6 841 aaKnown RBP16.9■□□□□ 0.3
MSH5-206ENST00000423982 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
MSH5-206ENST00000423982 NBPF15Q8N660 670 aa16.9■□□□□ 0.3
MSH5-206ENST00000423982 PPFIA3O75145 1194 aa16.9■□□□□ 0.3
MSH5-206ENST00000423982 CLSTN2Q9H4D0 955 aa16.9■□□□□ 0.3
MSH5-206ENST00000423982 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
MSH5-206ENST00000423982 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.9■□□□□ 0.3
MSH5-206ENST00000423982 V9GYY5 206 aaPredicted RBP16.9■□□□□ 0.3
MSH5-206ENST00000423982 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
MSH5-206ENST00000423982 FTOQ9C0B1 505 aaKnown RBP eCLIP16.9■□□□□ 0.3
MSH5-206ENST00000423982 TPD52L1Q16890 204 aaPredicted RBP16.89■□□□□ 0.29
MSH5-206ENST00000423982 FSD1Q9BTV5 496 aa16.89■□□□□ 0.29
MSH5-206ENST00000423982 RPS6KB1P23443 525 aa16.89■□□□□ 0.29
MSH5-206ENST00000423982 RIC3Q7Z5B4 369 aa16.89■□□□□ 0.29
MSH5-206ENST00000423982 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
MSH5-206ENST00000423982 ATP6V1AP38606 617 aa16.88■□□□□ 0.29
MSH5-206ENST00000423982 C11orf57Q6ZUT1 292 aaPredicted RBP16.88■□□□□ 0.29
MSH5-206ENST00000423982 TDRD7Q8NHU6 1098 aaKnown RBP16.88■□□□□ 0.29
MSH5-206ENST00000423982 GPATCH3Q96I76 525 aa16.88■□□□□ 0.29
MSH5-206ENST00000423982 KAZALD1Q96I82 304 aa16.88■□□□□ 0.29
MSH5-206ENST00000423982 LRRC2Q9BYS8 371 aa16.88■□□□□ 0.29
MSH5-206ENST00000423982 SCAND2PQ9GZW5 306 aaPredicted RBP16.88■□□□□ 0.29
MSH5-206ENST00000423982 TTLL7Q6ZT98 887 aa16.88■□□□□ 0.29
MSH5-206ENST00000423982 ERCC4Q92889 916 aaPredicted RBP16.88■□□□□ 0.29
MSH5-206ENST00000423982 FBXW7Q969H0 707 aa16.88■□□□□ 0.29
MSH5-206ENST00000423982 SUCLG2Q96I99 432 aa16.88■□□□□ 0.29
MSH5-206ENST00000423982 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
MSH5-206ENST00000423982 SMTNL1A8MU46 457 aa16.87■□□□□ 0.29
MSH5-206ENST00000423982 SMIM5Q71RC9 77 aa16.87■□□□□ 0.29
MSH5-206ENST00000423982 CTNNA3Q9UI47 895 aa16.87■□□□□ 0.29
MSH5-206ENST00000423982 GOLGB1Q14789 3259 aaKnown RBP16.87■□□□□ 0.29
MSH5-206ENST00000423982 PALLDQ8WX93 1383 aa16.87■□□□□ 0.29
MSH5-206ENST00000423982 PDCP20941 246 aa16.87■□□□□ 0.29
MSH5-206ENST00000423982 MTX1Q13505 466 aa16.87■□□□□ 0.29
MSH5-206ENST00000423982 ZNF772Q68DY9 489 aaPredicted RBP16.87■□□□□ 0.29
MSH5-206ENST00000423982 RBM43Q6ZSC3 357 aaKnown RBP16.87■□□□□ 0.29
MSH5-206ENST00000423982 BRF1Q92994 677 aa16.87■□□□□ 0.29
MSH5-206ENST00000423982 BICC1Q9H694 974 aaKnown RBP16.87■□□□□ 0.29
MSH5-206ENST00000423982 DDX19AQ9NUU7 478 aaKnown RBP16.87■□□□□ 0.29
MSH5-206ENST00000423982 LOC102724428A0A0B4J2F2 783 aa16.86■□□□□ 0.29
MSH5-206ENST00000423982 PSMA5P28066 241 aa16.86■□□□□ 0.29
MSH5-206ENST00000423982 SIK1P57059 783 aa16.86■□□□□ 0.29
MSH5-206ENST00000423982 A0A0U1RQG5 324 aaPredicted RBP16.86■□□□□ 0.29
MSH5-206ENST00000423982 ATP5J2-PTCD1G3V325 749 aa16.86■□□□□ 0.29
MSH5-206ENST00000423982 CCDC112Q8NEF3 446 aa16.86■□□□□ 0.29
MSH5-206ENST00000423982 ZBTB1Q9Y2K1 713 aa16.86■□□□□ 0.29
MSH5-206ENST00000423982 CCDC129Q6ZRS4 1044 aa16.85■□□□□ 0.29
MSH5-206ENST00000423982 CHMP4AQ9BY43 222 aa16.85■□□□□ 0.29
MSH5-206ENST00000423982 STARD3NLO95772 234 aa16.85■□□□□ 0.29
MSH5-206ENST00000423982 KRT27Q7Z3Y8 459 aa16.85■□□□□ 0.29
MSH5-206ENST00000423982 TRMT1Q9NXH9 659 aaKnown RBP16.85■□□□□ 0.29
MSH5-206ENST00000423982 COL15A1P39059 1388 aa16.85■□□□□ 0.29
MSH5-206ENST00000423982 THSD7AQ9UPZ6 1657 aa16.85■□□□□ 0.29
MSH5-206ENST00000423982 ITPK1Q13572 414 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 KSR2Q6VAB6 950 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 LRP10Q7Z4F1 713 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 MYD88Q99836 296 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 RGS17Q9UGC6 210 aaPredicted RBP16.84■□□□□ 0.29
MSH5-206ENST00000423982 PAPPAQ13219 1627 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 ONECUT3O60422 494 aaPredicted RBP16.84■□□□□ 0.29
MSH5-206ENST00000423982 TRIM37O94972 964 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 RESTQ13127 1097 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 ANKRD13DQ6ZTN6 518 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 FILIP1Q7Z7B0 1213 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 SEC62Q99442 399 aaKnown RBP16.84■□□□□ 0.29
MSH5-206ENST00000423982 UBR2Q8IWV8 1755 aa16.84■□□□□ 0.29
MSH5-206ENST00000423982 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.29
MSH5-206ENST00000423982 RBM6P78332 1123 aaKnown RBP16.83■□□□□ 0.29
MSH5-206ENST00000423982 IQCB1Q15051 598 aa16.83■□□□□ 0.29
MSH5-206ENST00000423982 CEP135Q66GS9 1140 aa16.83■□□□□ 0.29
MSH5-206ENST00000423982 POTEAQ6S8J7 498 aa16.83■□□□□ 0.29
MSH5-206ENST00000423982 LRRC8AQ8IWT6 810 aa16.83■□□□□ 0.29
MSH5-206ENST00000423982 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.28
MSH5-206ENST00000423982 OGFRQ9NZT2 677 aa16.83■□□□□ 0.28
MSH5-206ENST00000423982 CYP19A1P11511 503 aaPredicted RBP16.83■□□□□ 0.28
MSH5-206ENST00000423982 HSP90B1P14625 803 aaKnown RBP16.83■□□□□ 0.28
MSH5-206ENST00000423982 GOLPH3LQ9H4A5 285 aa16.83■□□□□ 0.28
MSH5-206ENST00000423982 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
MSH5-206ENST00000423982 MED23Q9ULK4 1368 aa16.83■□□□□ 0.28
MSH5-206ENST00000423982 H3BQV1 296 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 TAF5LO75529 589 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 KIF20AO95235 890 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 RXRBP28702 533 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 IFFO2Q5TF58 517 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 RNF20Q5VTR2 975 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 Q6ZUG5 572 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 ZNF771Q7L3S4 317 aaPredicted RBP16.82■□□□□ 0.28
MSH5-206ENST00000423982 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 GTF3C6Q969F1 213 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 FEZ1Q99689 392 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 NPHP1O15259 732 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 ANKRD1Q15327 319 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 SLFNL1Q499Z3 407 aa16.82■□□□□ 0.28
MSH5-206ENST00000423982 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.82■□□□□ 0.28
MSH5-206ENST00000423982 KLHL34Q8N239 644 aa16.81■□□□□ 0.28
MSH5-206ENST00000423982 TBC1D2BQ9UPU7 963 aa16.81■□□□□ 0.28
MSH5-206ENST00000423982 GOLGA6L19H0YKK7 550 aa16.81■□□□□ 0.28
MSH5-206ENST00000423982 GRM8O00222 908 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms