RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 COPRSQ9NQ92 184 aa10.47□□□□□ -0.73
SMC4P1-201ENST00000414479 GHRHP01286 108 aa10.46□□□□□ -0.73
SMC4P1-201ENST00000414479 SSBP05455 408 aaKnown RBP eCLIP10.46□□□□□ -0.73
SMC4P1-201ENST00000414479 LMNB1P20700 586 aa10.46□□□□□ -0.73
SMC4P1-201ENST00000414479 COL9A2Q14055 689 aaPredicted RBP10.46□□□□□ -0.73
SMC4P1-201ENST00000414479 MCF2L2Q86YR7 1114 aa10.46□□□□□ -0.73
SMC4P1-201ENST00000414479 NDFIP2Q9NV92 336 aa10.46□□□□□ -0.73
SMC4P1-201ENST00000414479 STRIP2Q9ULQ0 834 aa10.46□□□□□ -0.73
SMC4P1-201ENST00000414479 CD33P20138 364 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 GPLD1P80108 840 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 RBL2Q08999 1139 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 RPS26P11Q5JNZ5 115 aaPredicted RBP10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 TPTE2Q6XPS3 522 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 CKAP2LQ8IYA6 745 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 CCDC155Q8N6L0 562 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 CEP120Q8N960 986 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 TMEM102Q8N9M5 508 aaPredicted RBP10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 NSUN5Q96P11 429 aaKnown RBP10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 BHLHE41Q9C0J9 482 aaPredicted RBP10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 STRN4Q9NRL3 753 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 DZANK1Q9NVP4 752 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 PRR12Q9ULL5 1215 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 TMA7Q9Y2S6 64 aaKnown RBP10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 SAMM50Q9Y512 469 aa10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 SUPT16HQ9Y5B9 1047 aaKnown RBP10.45□□□□□ -0.74
SMC4P1-201ENST00000414479 GFRA3O60609 400 aa10.44□□□□□ -0.74
SMC4P1-201ENST00000414479 FGFR3P22607 806 aa10.44□□□□□ -0.74
SMC4P1-201ENST00000414479 ITPKAP23677 461 aa10.44□□□□□ -0.74
SMC4P1-201ENST00000414479 UBAP2LQ14157 1087 aaKnown RBP10.44□□□□□ -0.74
SMC4P1-201ENST00000414479 PMFBP1Q8TBY8 1022 aa10.44□□□□□ -0.74
SMC4P1-201ENST00000414479 FAM177BA6PVY3 158 aa10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 MINDY4BA8MYZ0 360 aa10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 FBXO24O75426 580 aa10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 THBS1P07996 1170 aa10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 DBN1Q16643 649 aa10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 ZNF837Q96EG3 531 aaPredicted RBP10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 CNTNAP3BQ96NU0 1288 aa10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 SLC30A3Q99726 388 aa10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 CNTNAP3Q9BZ76 1288 aa10.43□□□□□ -0.74
SMC4P1-201ENST00000414479 PDE2AO00408 941 aaPredicted RBP10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 SMNDC1O75940 238 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 ITGA6P23229 1130 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 LIG3P49916 1009 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 PPP2R3AQ06190 1150 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 MAP3K11Q16584 847 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 NBPF6Q5VWK0 638 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 TRPM4Q8TD43 1214 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 ASAP3Q8TDY4 903 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 NBPF4Q96M43 638 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 NT5C1AQ9BXI3 368 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 ADAMTS1Q9UHI8 967 aa10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 GPN3Q9UHW5 284 aaPredicted RBP10.42□□□□□ -0.74
SMC4P1-201ENST00000414479 A0A096LPE4 126 aa10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 LOC102724428A0A0B4J2F2 783 aa10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 A0A1W2PPZ6 126 aa10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 SIK1P57059 783 aa10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 RPS26P62854 115 aaKnown RBP10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 NFX1Q12986 1120 aaKnown RBP10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 SNAP47Q5SQN1 464 aa10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 COL13A1Q5TAT6 717 aaPredicted RBP10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 RAB44Q7Z6P3 723 aaPredicted RBP10.41□□□□□ -0.74
SMC4P1-201ENST00000414479 NCLP19338 710 aaKnown RBP10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 GRIA4P48058 902 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 NFE2L2Q16236 605 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 CCDC144BQ3MJ40 725 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 MICALL1Q8N3F8 863 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 PHC3Q8NDX5 983 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 ZNF296Q8WUU4 475 aaPredicted RBP10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 RHOVQ96L33 236 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 PBX4Q9BYU1 374 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 UBE2OQ9C0C9 1292 aaKnown RBP10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 OSBPL2Q9H1P3 480 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 AAASQ9NRG9 546 aa10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.4□□□□□ -0.74
SMC4P1-201ENST00000414479 SOBPA7XYQ1 873 aa10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 LMNB2Q03252 620 aa10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 TTBK2Q6IQ55 1244 aa10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 NXPE3Q969Y0 559 aa10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 NECAB3Q96P71 396 aaPredicted RBP10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 TRIM56Q9BRZ2 755 aaKnown RBP10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 ZNF576Q9H609 170 aa10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 ZSWIM4Q9H7M6 989 aa10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 KCNQ5Q9NR82 932 aa10.39□□□□□ -0.75
SMC4P1-201ENST00000414479 ACPPP15309 386 aa10.38□□□□□ -0.75
SMC4P1-201ENST00000414479 EIF2AK2P19525 551 aaKnown RBP10.38□□□□□ -0.75
SMC4P1-201ENST00000414479 NASPP49321 788 aaPredicted RBP10.38□□□□□ -0.75
SMC4P1-201ENST00000414479 MAP3K10Q02779 954 aa10.38□□□□□ -0.75
SMC4P1-201ENST00000414479 TMEM39AQ9NV64 488 aa10.38□□□□□ -0.75
SMC4P1-201ENST00000414479 EFR3BQ9Y2G0 817 aa10.38□□□□□ -0.75
SMC4P1-201ENST00000414479 ROBO2Q9HCK4 1378 aa10.38□□□□□ -0.75
SMC4P1-201ENST00000414479 CELA3AP09093 270 aa10.37□□□□□ -0.75
SMC4P1-201ENST00000414479 TBC1D8BQ0IIM8 1120 aa10.37□□□□□ -0.75
SMC4P1-201ENST00000414479 APOBRQ0VD83 1088 aa10.37□□□□□ -0.75
SMC4P1-201ENST00000414479 AGMOQ6ZNB7 445 aa10.37□□□□□ -0.75
SMC4P1-201ENST00000414479 DDX54Q8TDD1 881 aaKnown RBP10.37□□□□□ -0.75
SMC4P1-201ENST00000414479 CPLX3Q8WVH0 158 aa10.37□□□□□ -0.75
SMC4P1-201ENST00000414479 BSNDQ8WZ55 320 aa10.37□□□□□ -0.75
SMC4P1-201ENST00000414479 RASSF4Q9H2L5 321 aa10.37□□□□□ -0.75
SMC4P1-201ENST00000414479 CLEC4MQ9H2X3 399 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms