RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 SH2B1Q9NRF2 756 aaPredicted RBP4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 POLIQ9UNA4 740 aa4.11□□□□□ -1.75
RNU2-54P-201ENST00000410299 F8W735 103 aaPredicted RBP4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 SUPT5HO00267 1087 aaKnown RBP4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 NPR3P17342 541 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 EPHA1P21709 976 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 CES1P23141 567 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 ALKBH2Q6NS38 261 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 XKR5Q6UX68 686 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 MAP4K3Q8IVH8 894 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 CACTIN-AS1Q8N1I8 211 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 AGGF1Q8N302 714 aaeCLIP4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 TTC16Q8NEE8 873 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 HHIPQ96QV1 700 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 ARID3AQ99856 593 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 CARD10Q9BWT7 1032 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 MRPL18Q9H0U6 180 aaKnown RBP4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 MUC3BQ9H195 1237 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 CHRDQ9H2X0 955 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 CCDC87Q9NVE4 849 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 KCNK4Q9NYG8 393 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 SALL4Q9UJQ4 1053 aa4.1□□□□□ -1.75
RNU2-54P-201ENST00000410299 FZD6O60353 706 aa4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 FAM13AO94988 1023 aa4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 WISP1O95388 367 aa4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 PTPRAP18433 802 aa4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 CD68P34810 354 aaPredicted RBP4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 FKBP4Q02790 459 aaKnown RBP eCLIP4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 TMEM130Q8N3G9 435 aa4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 SRA1Q9HD15 236 aaKnown RBP4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 ZFP64Q9NPA5 681 aa4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 DZANK1Q9NVP4 752 aa4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 MTMR7Q9Y216 660 aa4.09□□□□□ -1.75
RNU2-54P-201ENST00000410299 KRTAP4-8A0A0G2JLE6 195 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 NFKBIEO00221 500 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 PDE2AO00408 941 aaPredicted RBP4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 TM4SF5O14894 197 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 FSCN2O14926 492 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 EREGO14944 169 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 DDX3YO15523 660 aaKnown RBP4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 TNFRSF21O75509 655 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 GLB1P16278 677 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 SF3B2Q13435 895 aaKnown RBP4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 DZIP1LQ8IYY4 767 aaKnown RBP4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 ADAM19Q9H013 955 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 GOLGA2P5Q9HBQ8 144 aa4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 FOXD3Q9UJU5 478 aaPredicted RBP4.08□□□□□ -1.76
RNU2-54P-201ENST00000410299 ADAM11O75078 769 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 PHACTR2O75167 634 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 SERPINB4P48594 390 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 FAM117BQ6P1L5 589 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 PRR23CQ6ZRP0 262 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 Q6ZS46 218 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 ACAD11Q709F0 780 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 KLHDC7BQ96G42 594 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 UBL7Q96S82 380 aaPredicted RBP4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 OSMRQ99650 979 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 ZKSCAN3Q9BRR0 538 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 LATS2Q9NRM7 1088 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 USTQ9Y2C2 406 aa4.07□□□□□ -1.76
RNU2-54P-201ENST00000410299 FAM177BA6PVY3 158 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 H3BRJ5 948 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 ICMTO60725 284 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 COBLO75128 1261 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 USP5P45974 858 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 CABP4P57796 275 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 DUOXA2Q1HG44 320 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 HGSNATQ68CP4 663 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 KIAA1211Q6ZU35 1233 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 GJD3Q8N144 294 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 KLHL23Q8NBE8 558 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 DCAF11Q8TEB1 546 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 SNX29Q8TEQ0 813 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 UBASH3BQ8TF42 649 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 FOXD4L4Q8WXT5 416 aaPredicted RBP4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 SLC7A3Q8WY07 619 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 PMEPA1Q969W9 287 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 NXPE3Q969Y0 559 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 SEC31BQ9NQW1 1179 aa4.06□□□□□ -1.76
RNU2-54P-201ENST00000410299 H3BRB1 525 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 POLR3DP05423 398 aaPredicted RBP4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 EDN3P14138 238 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 NLRP12P59046 1061 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 PIP4K2BP78356 416 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 EHHADHQ08426 723 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 ECM1Q16610 540 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 ARTNQ5T4W7 220 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 TMEM102Q8N9M5 508 aaPredicted RBP4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 RETREG2Q8NC44 543 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 TUT1Q9H6E5 874 aaKnown RBP4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 ZFYVE28Q9HCC9 887 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 EGFL7Q9UHF1 273 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 SOX13Q9UN79 622 aa4.05□□□□□ -1.76
RNU2-54P-201ENST00000410299 METTL12A8MUP2 240 aa4.04□□□□□ -1.76
RNU2-54P-201ENST00000410299 SOX1O00570 391 aaPredicted RBP4.04□□□□□ -1.76
RNU2-54P-201ENST00000410299 FSTP19883 344 aa4.04□□□□□ -1.76
RNU2-54P-201ENST00000410299 ARHGAP4P98171 946 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms