RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 KCNB2Q92953 911 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 FAM227BQ96M60 508 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 DNAJC2Q99543 621 aaKnown RBP6.67□□□□□ -1.34
EPHA4-202ENST00000409854 ANO2Q9NQ90 1003 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 TFCP2L1Q9NZI6 479 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 NDUFB9Q9Y6M9 179 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 UQCRFS1P1P0C7P4 283 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 MCAMP43121 646 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 SCARF1Q14162 830 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 CCDC102BQ68D86 513 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 DDX46Q7L014 1031 aaKnown RBP6.67□□□□□ -1.34
EPHA4-202ENST00000409854 IL27Q8NEV9 243 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 MINPP1Q9UNW1 487 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 ZNF804BA4D1E1 1349 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 DUOX1Q9NRD9 1551 aa6.67□□□□□ -1.34
EPHA4-202ENST00000409854 GOLIM4O00461 696 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 MCCP23508 829 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 RPS8P62241 208 aaKnown RBP6.66□□□□□ -1.34
EPHA4-202ENST00000409854 ST5P78524 1137 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 UBE4AQ14139 1066 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 NLGN1Q8N2Q7 840 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 HELBQ8NG08 1087 aaPredicted RBP6.66□□□□□ -1.34
EPHA4-202ENST00000409854 CCDC171Q6TFL3 1326 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 IRS2Q9Y4H2 1338 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 TAF5LO75529 589 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 PHKA1P46020 1223 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 GRAPQ13588 217 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 EZH2Q15910 746 aaKnown RBP6.66□□□□□ -1.34
EPHA4-202ENST00000409854 GORABQ5T7V8 394 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 GRAPLQ8TC17 118 aaPredicted RBP6.66□□□□□ -1.34
EPHA4-202ENST00000409854 COL1A1P02452 1464 aaPredicted RBP6.66□□□□□ -1.34
EPHA4-202ENST00000409854 ZNF646O15015 1829 aaPredicted RBP6.66□□□□□ -1.34
EPHA4-202ENST00000409854 HOXA10P31260 410 aaPredicted RBP6.66□□□□□ -1.34
EPHA4-202ENST00000409854 ZMYM1Q5SVZ6 1142 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 MAP4K1Q92918 833 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 ANTXR1Q9H6X2 564 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 HELLSQ9NRZ9 838 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 PALD1Q9ULE6 856 aa6.66□□□□□ -1.34
EPHA4-202ENST00000409854 ZAP70P43403 619 aa6.65□□□□□ -1.34
EPHA4-202ENST00000409854 PTH1RQ03431 593 aa6.65□□□□□ -1.34
EPHA4-202ENST00000409854 SLC15A2Q16348 729 aa6.65□□□□□ -1.34
EPHA4-202ENST00000409854 CCDC24Q8N4L8 307 aa6.65□□□□□ -1.34
EPHA4-202ENST00000409854 ANKRD2Q9GZV1 360 aa6.65□□□□□ -1.34
EPHA4-202ENST00000409854 RNF113AO15541 343 aaKnown RBP6.65□□□□□ -1.35
EPHA4-202ENST00000409854 ZFYP08048 801 aaPredicted RBP6.65□□□□□ -1.35
EPHA4-202ENST00000409854 EN1Q05925 392 aaPredicted RBP6.65□□□□□ -1.35
EPHA4-202ENST00000409854 NECTIN1Q15223 517 aa6.65□□□□□ -1.35
EPHA4-202ENST00000409854 TTF1Q15361 905 aaPredicted RBP6.65□□□□□ -1.35
EPHA4-202ENST00000409854 MCMDC2Q4G0Z9 681 aa6.65□□□□□ -1.35
EPHA4-202ENST00000409854 KIAA1211Q6ZU35 1233 aa6.65□□□□□ -1.35
EPHA4-202ENST00000409854 ZNF589Q86UQ0 364 aaPredicted RBP6.65□□□□□ -1.35
EPHA4-202ENST00000409854 CD2BP2O95400 341 aaKnown RBP6.64□□□□□ -1.35
EPHA4-202ENST00000409854 CYP2E1P05181 493 aaPredicted RBP6.64□□□□□ -1.35
EPHA4-202ENST00000409854 LRRFIP1Q32MZ4 808 aaKnown RBP6.64□□□□□ -1.35
EPHA4-202ENST00000409854 PI16Q6UXB8 463 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 HMG20BQ9P0W2 317 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 PDS5AQ29RF7 1337 aaKnown RBP6.64□□□□□ -1.35
EPHA4-202ENST00000409854 SNAP23O00161 211 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 CHGBP05060 677 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 SLC4A3P48751 1232 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 FKBP4Q02790 459 aaKnown RBP eCLIP6.64□□□□□ -1.35
EPHA4-202ENST00000409854 RASGRF1Q13972 1273 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 HSCBQ8IWL3 235 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 CRAMP1Q96RY5 1269 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 SNX14Q9Y5W7 946 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 CDK5RAP2Q96SN8 1893 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 LAMB1P07942 1786 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 TIAM2Q8IVF5 1701 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 RPAP1Q9BWH6 1393 aaPredicted RBP6.64□□□□□ -1.35
EPHA4-202ENST00000409854 MAST3O60307 1309 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 NPHP1O15259 732 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 SPATA5Q8NB90 893 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 RBM17Q96I25 401 aaKnown RBP6.64□□□□□ -1.35
EPHA4-202ENST00000409854 BRIP1Q9BX63 1249 aa6.64□□□□□ -1.35
EPHA4-202ENST00000409854 BAG6P46379 1132 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 TSGA10IPQ3SY00 556 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 C15orf52Q6ZUT6 534 aaKnown RBP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 FBXO33Q7Z6M2 555 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 RPGRQ92834 1020 aaKnown RBP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 SEC62Q99442 399 aaKnown RBP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 PIH1D3Q9NQM4 214 aaKnown RBP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 STK32BQ9NY57 414 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 RBM8AQ9Y5S9 174 aaKnown RBP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 BRCA1P38398 1863 aaKnown RBP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 K7ELQ4 463 aaPredicted RBP6.63□□□□□ -1.35
EPHA4-202ENST00000409854 SEMA3EO15041 775 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 ADD2P35612 726 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 BCAMP50895 628 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 ZSCAN25Q6NSZ9 544 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 TMC4Q7Z404 712 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 RASEFQ8IZ41 740 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 APPBP2Q92624 585 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 DSCC1Q9BVC3 393 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 TM6SF1Q9BZW5 370 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 PSME4Q14997 1843 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 FOCADQ5VW36 1801 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 SLX4Q8IY92 1834 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 XDHP47989 1333 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 TCRBV5S4A2TA0A5A2 114 aa6.63□□□□□ -1.35
EPHA4-202ENST00000409854 M0R2C6 588 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms