RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 GIMAP6Q6P9H5 292 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 CNTROBQ8N137 903 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 FBXL16Q8N461 479 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 TTC13Q8NBP0 860 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 IL17REQ8NFR9 667 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 PHOX2BQ99453 314 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 EYA1Q99502 592 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 AGXT2Q9BYV1 514 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 CBX8Q9HC52 389 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 TSPYL4Q9UJ04 414 aa3.73□□□□□ -1.81
CUL3-204ENST00000409777 COL18A1P39060 1754 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 SALL1Q9NSC2 1324 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 TULP2O00295 520 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 FOXO3O43524 673 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 GLRX3O76003 335 aaKnown RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 RGS20O76081 388 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 HMGB1P09429 215 aaKnown RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 H2AFXP16104 143 aaPredicted RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 LIG1P18858 919 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 CCZ1BP86790 482 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 CCZ1P86791 482 aaPredicted RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 PTH1RQ03431 593 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 TOB2Q14106 344 aaPredicted RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 MAP3K11Q16584 847 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 ADCK5Q3MIX3 580 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 SMARCC2Q8TAQ2 1214 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 UPF1Q92900 1129 aaKnown RBP eCLIP3.72□□□□□ -1.81
CUL3-204ENST00000409777 GLMNQ92990 594 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 BPIFA3Q9BQP9 254 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 OSBPL5Q9H0X9 879 aaPredicted RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 TPCN1Q9ULQ1 816 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 SMC3Q9UQE7 1217 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 TNRQ92752 1358 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 POTEB3A0JP26 581 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 GNAT3A8MTJ3 354 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 ALDH1L1O75891 902 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 PTMAP06454 111 aaKnown RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 PTGS1P23219 599 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 ATL3Q6DD88 541 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 TYW1BQ6NUM6 668 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 POTEBQ6S5H4 581 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 PPP1R42Q7Z4L9 355 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 ENGASEQ8NFI3 743 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 LEO1Q8WVC0 666 aaPredicted RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 DDX12PQ92771 950 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 PGBD1Q96JS3 809 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 SCAND2PQ9GZW5 306 aaPredicted RBP3.72□□□□□ -1.81
CUL3-204ENST00000409777 PDRG1Q9NUG6 133 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 MYH7P12883 1935 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 ARAP2Q8WZ64 1704 aa3.72□□□□□ -1.81
CUL3-204ENST00000409777 TUBB4AP04350 444 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 UBTFL1P0CB47 393 aaPredicted RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 PDCP20941 246 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 RPS6KB1P23443 525 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 U2AF2P26368 475 aaKnown RBP eCLIP3.71□□□□□ -1.825e-7■■■□□ 15.5
CUL3-204ENST00000409777 EIF4A1P60842 406 aaKnown RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 TAF7Q15545 349 aaPredicted RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 TERF2Q15554 542 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CCDC144BQ3MJ40 725 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CCDC144CPQ8IYA2 1237 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CACTINQ8WUQ7 758 aaKnown RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 RUFY2Q8WXA3 655 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 EVI5LQ96CN4 794 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CALR3Q96L12 384 aaKnown RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 STK31Q9BXU1 1019 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 NUP62CLQ9H1M0 184 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 HMG20BQ9P0W2 317 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CYP46A1Q9Y6A2 500 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CARMIL3Q8ND23 1372 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 PXDNQ92626 1479 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 HIP1O00291 1037 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 SLC27A2O14975 620 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CASTP20810 708 aaKnown RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 EVCP57679 992 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 KRT85P78386 507 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 SNW1Q13573 536 aaKnown RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 ANKRD1Q15327 319 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CREB3L3Q68CJ9 461 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CDC37L1Q7L3B6 337 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 LRRC8AQ8IWT6 810 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 DHX40Q8IX18 779 aaKnown RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 ZNF397Q8NF99 534 aaPredicted RBP3.71□□□□□ -1.82
CUL3-204ENST00000409777 KAZALD1Q96I82 304 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 PRDM10Q9NQV6 1147 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 ECHDC1Q9NTX5 307 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 RCOR1Q9UKL0 485 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 PCDHGA4Q9Y5G9 962 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 LRP6O75581 1613 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 TIAM2Q8IVF5 1701 aa3.71□□□□□ -1.82
CUL3-204ENST00000409777 CTAGE5O15320 804 aa3.7□□□□□ -1.82
CUL3-204ENST00000409777 HOXC9P31274 260 aa3.7□□□□□ -1.82
CUL3-204ENST00000409777 CBX1P83916 185 aa3.7□□□□□ -1.82
CUL3-204ENST00000409777 COL9A3Q14050 684 aaPredicted RBP3.7□□□□□ -1.82
CUL3-204ENST00000409777 KMT5BQ4FZB7 885 aa3.7□□□□□ -1.82
CUL3-204ENST00000409777 RNF20Q5VTR2 975 aa3.7□□□□□ -1.82
CUL3-204ENST00000409777 NAA16Q6N069 864 aaPredicted RBP3.7□□□□□ -1.82
CUL3-204ENST00000409777 CCDC186Q7Z3E2 898 aa3.7□□□□□ -1.82
CUL3-204ENST00000409777 TXNDC2Q86VQ3 553 aa3.7□□□□□ -1.82
CUL3-204ENST00000409777 NUTM1Q86Y26 1132 aa3.7□□□□□ -1.82
CUL3-204ENST00000409777 ERC1Q8IUD2 1116 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms