RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 DACT2Q5SW24 774 aa21.62■■□□□ 1.05
CHMP3-203ENST00000409225 ARMC9Q7Z3E5 817 aa21.62■■□□□ 1.05
CHMP3-203ENST00000409225 CCDC191Q8NCU4 936 aa21.62■■□□□ 1.05
CHMP3-203ENST00000409225 CFHR5Q9BXR6 569 aa21.62■■□□□ 1.05
CHMP3-203ENST00000409225 HABP4Q5JVS0 413 aaKnown RBP21.61■■□□□ 1.05
CHMP3-203ENST00000409225 CWC25Q9NXE8 425 aaPredicted RBP21.61■■□□□ 1.05
CHMP3-203ENST00000409225 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.61■■□□□ 1.05
CHMP3-203ENST00000409225 MED23Q9ULK4 1368 aa21.61■■□□□ 1.05
CHMP3-203ENST00000409225 SPRYD7Q5W111 196 aa21.6■■□□□ 1.05
CHMP3-203ENST00000409225 TRIM17Q9Y577 477 aa21.6■■□□□ 1.05
CHMP3-203ENST00000409225 RUNDC1Q96C34 613 aa21.59■■□□□ 1.05
CHMP3-203ENST00000409225 CDC5LQ99459 802 aaKnown RBP21.59■■□□□ 1.05
CHMP3-203ENST00000409225 MBIPQ9NS73 344 aa21.59■■□□□ 1.05
CHMP3-203ENST00000409225 ANGEL1Q9UNK9 670 aaKnown RBP21.59■■□□□ 1.05
CHMP3-203ENST00000409225 MYO3BQ8WXR4 1341 aa21.58■■□□□ 1.05
CHMP3-203ENST00000409225 POTEFA5A3E0 1075 aa21.58■■□□□ 1.05
CHMP3-203ENST00000409225 ALDH1A1P00352 501 aa21.58■■□□□ 1.05
CHMP3-203ENST00000409225 STRIP1Q5VSL9 837 aa21.58■■□□□ 1.05
CHMP3-203ENST00000409225 MINPP1Q9UNW1 487 aa21.58■■□□□ 1.05
CHMP3-203ENST00000409225 FZD1Q9UP38 647 aa21.58■■□□□ 1.05
CHMP3-203ENST00000409225 ZNF646O15015 1829 aaPredicted RBP21.57■■□□□ 1.04
CHMP3-203ENST00000409225 CCT4P50991 539 aaKnown RBP21.57■■□□□ 1.04
CHMP3-203ENST00000409225 CTSWP56202 376 aa21.57■■□□□ 1.04
CHMP3-203ENST00000409225 LDLRAD1Q5T700 205 aa21.57■■□□□ 1.04
CHMP3-203ENST00000409225 OTOP1Q7RTM1 612 aa21.57■■□□□ 1.04
CHMP3-203ENST00000409225 APOBEC3FQ8IUX4 373 aaKnown RBP21.57■■□□□ 1.04
CHMP3-203ENST00000409225 ELL2O00472 640 aaPredicted RBP21.56■■□□□ 1.04
CHMP3-203ENST00000409225 RALBP1Q15311 655 aa21.56■■□□□ 1.04
CHMP3-203ENST00000409225 METTL22Q9BUU2 404 aaPredicted RBP21.56■■□□□ 1.04
CHMP3-203ENST00000409225 COA1Q9GZY4 146 aa21.56■■□□□ 1.04
CHMP3-203ENST00000409225 BSDC1Q9NW68 430 aaPredicted RBP21.56■■□□□ 1.04
CHMP3-203ENST00000409225 SPEF2Q9C093 1822 aa21.56■■□□□ 1.04
CHMP3-203ENST00000409225 MANSC4A6NHS7 340 aaPredicted RBP21.55■■□□□ 1.04
CHMP3-203ENST00000409225 TXNRD3Q86VQ6 643 aa21.55■■□□□ 1.04
CHMP3-203ENST00000409225 IFNL1Q8IU54 200 aa21.55■■□□□ 1.04
CHMP3-203ENST00000409225 KIAA0825Q8IV33 1275 aa21.55■■□□□ 1.04
CHMP3-203ENST00000409225 INTS3Q68E01 1043 aaKnown RBP21.54■■□□□ 1.04
CHMP3-203ENST00000409225 SLC10A4Q96EP9 437 aa21.54■■□□□ 1.04
CHMP3-203ENST00000409225 GREM2Q9H772 168 aa21.54■■□□□ 1.04
CHMP3-203ENST00000409225 WDR43Q15061 677 aaKnown RBP eCLIP21.53■■□□□ 1.04
CHMP3-203ENST00000409225 TTLL5Q6EMB2 1281 aa21.53■■□□□ 1.04
CHMP3-203ENST00000409225 TTLL11Q8NHH1 800 aa21.53■■□□□ 1.04
CHMP3-203ENST00000409225 IGF2BP3O00425 579 aaKnown RBP eCLIP21.52■■□□□ 1.04
CHMP3-203ENST00000409225 DDX58O95786 925 aaKnown RBP21.52■■□□□ 1.04
CHMP3-203ENST00000409225 MMP14P50281 582 aa21.52■■□□□ 1.04
CHMP3-203ENST00000409225 INHBEP58166 350 aa21.52■■□□□ 1.04
CHMP3-203ENST00000409225 ZBED3Q96IU2 234 aaPredicted RBP21.52■■□□□ 1.04
CHMP3-203ENST00000409225 WNK4Q96J92 1243 aa21.52■■□□□ 1.04
CHMP3-203ENST00000409225 CLMNQ96JQ2 1002 aa21.52■■□□□ 1.04
CHMP3-203ENST00000409225 KLRK1P26718 216 aa21.51■■□□□ 1.03
CHMP3-203ENST00000409225 GTF2IP78347 998 aa21.51■■□□□ 1.03
CHMP3-203ENST00000409225 CD99L2Q8TCZ2 262 aa21.51■■□□□ 1.03
CHMP3-203ENST00000409225 DEFB129Q9H1M3 183 aa21.51■■□□□ 1.03
CHMP3-203ENST00000409225 MAP3K2Q9Y2U5 619 aa21.51■■□□□ 1.03
CHMP3-203ENST00000409225 HTTP42858 3142 aa21.51■■□□□ 1.03
CHMP3-203ENST00000409225 MKI67P46013 3256 aaKnown RBP21.51■■□□□ 1.03
CHMP3-203ENST00000409225 ZNF853P0CG23 659 aa21.5■■□□□ 1.03
CHMP3-203ENST00000409225 ZBTB48P10074 688 aaPredicted RBP21.5■■□□□ 1.03
CHMP3-203ENST00000409225 ERO1AQ96HE7 468 aa21.5■■□□□ 1.03
CHMP3-203ENST00000409225 PTPN22Q9Y2R2 807 aa21.5■■□□□ 1.03
CHMP3-203ENST00000409225 LEMD3Q9Y2U8 911 aa21.5■■□□□ 1.03
CHMP3-203ENST00000409225 COL1A1P02452 1464 aaPredicted RBP21.5■■□□□ 1.03
CHMP3-203ENST00000409225 IGKV5-2P06315 115 aa21.49■■□□□ 1.03
CHMP3-203ENST00000409225 IGHMBP2P38935 993 aaKnown RBP21.49■■□□□ 1.03
CHMP3-203ENST00000409225 ZNF804BA4D1E1 1349 aa21.49■■□□□ 1.03
CHMP3-203ENST00000409225 SSC5DA1L4H1 1573 aa21.48■■□□□ 1.03
CHMP3-203ENST00000409225 EN2P19622 333 aaPredicted RBP21.48■■□□□ 1.03
CHMP3-203ENST00000409225 DLGAP5Q15398 846 aa21.48■■□□□ 1.03
CHMP3-203ENST00000409225 MAP3K11Q16584 847 aa21.48■■□□□ 1.03
CHMP3-203ENST00000409225 ADAMTS8Q9UP79 889 aa21.48■■□□□ 1.03
CHMP3-203ENST00000409225 MYBBP1AQ9BQG0 1328 aaKnown RBP21.48■■□□□ 1.03
CHMP3-203ENST00000409225 MYH3P11055 1940 aa21.47■■□□□ 1.03
CHMP3-203ENST00000409225 PPP1R12BO60237 982 aaPredicted RBP21.47■■□□□ 1.03
CHMP3-203ENST00000409225 CRHR2Q13324 411 aa21.47■■□□□ 1.03
CHMP3-203ENST00000409225 C8orf58Q8NAV2 365 aa21.47■■□□□ 1.03
CHMP3-203ENST00000409225 EFCC1Q9HA90 598 aa21.47■■□□□ 1.03
CHMP3-203ENST00000409225 IFT57Q9NWB7 429 aa21.47■■□□□ 1.03
CHMP3-203ENST00000409225 RBBP6Q7Z6E9 1792 aaKnown RBP21.46■■□□□ 1.03
CHMP3-203ENST00000409225 KIAA0100Q14667 2235 aaKnown RBP21.46■■□□□ 1.03
CHMP3-203ENST00000409225 FXR1P51114 621 aaKnown RBP eCLIP21.46■■□□□ 1.03
CHMP3-203ENST00000409225 GNAI1P63096 354 aa21.46■■□□□ 1.03
CHMP3-203ENST00000409225 CCDC30Q5VVM6 783 aa21.46■■□□□ 1.03
CHMP3-203ENST00000409225 ARMC5Q96C12 935 aa21.46■■□□□ 1.03
CHMP3-203ENST00000409225 PCDHAC2Q9Y5I4 1007 aa21.46■■□□□ 1.03
CHMP3-203ENST00000409225 PI4KAP2A4QPH2 592 aa21.45■■□□□ 1.02
CHMP3-203ENST00000409225 KCNJ4P48050 445 aa21.45■■□□□ 1.02
CHMP3-203ENST00000409225 CWF19L2Q2TBE0 894 aaKnown RBP21.45■■□□□ 1.02
CHMP3-203ENST00000409225 OTUD7BQ6GQQ9 843 aa21.45■■□□□ 1.02
CHMP3-203ENST00000409225 KSR2Q6VAB6 950 aa21.45■■□□□ 1.02
CHMP3-203ENST00000409225 PI4KAP1Q8N8J0 262 aa21.45■■□□□ 1.02
CHMP3-203ENST00000409225 ANKRD2Q9GZV1 360 aa21.45■■□□□ 1.02
CHMP3-203ENST00000409225 PPP2R3BQ9Y5P8 575 aa21.45■■□□□ 1.02
CHMP3-203ENST00000409225 CLRN2A0PK11 232 aa21.44■■□□□ 1.02
CHMP3-203ENST00000409225 F8W031 263 aaPredicted RBP21.44■■□□□ 1.02
CHMP3-203ENST00000409225 GJA5P36382 358 aa21.44■■□□□ 1.02
CHMP3-203ENST00000409225 NEXNQ0ZGT2 675 aa21.44■■□□□ 1.02
CHMP3-203ENST00000409225 UBE3BQ7Z3V4 1068 aa21.44■■□□□ 1.02
CHMP3-203ENST00000409225 CERS5Q8N5B7 392 aa21.44■■□□□ 1.02
CHMP3-203ENST00000409225 CENPFP49454 3210 aa21.43■■□□□ 1.02
CHMP3-203ENST00000409225 ITGA6P23229 1130 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms