RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CCDC173Q0VFZ6 552 aa16.41■□□□□ 0.22
SCAF4-202ENST00000399804 WASF1Q92558 559 aa16.41■□□□□ 0.22
SCAF4-202ENST00000399804 APPBP2Q92624 585 aa16.41■□□□□ 0.22
SCAF4-202ENST00000399804 IKQ13123 557 aaPredicted RBP16.41■□□□□ 0.22
SCAF4-202ENST00000399804 ZSCAN29Q8IWY8 852 aaPredicted RBP16.41■□□□□ 0.22
SCAF4-202ENST00000399804 PI4K2BQ8TCG2 481 aa16.41■□□□□ 0.22
SCAF4-202ENST00000399804 NAT10Q9H0A0 1025 aaKnown RBP16.41■□□□□ 0.22
SCAF4-202ENST00000399804 RPS6KB1P23443 525 aa16.41■□□□□ 0.22
SCAF4-202ENST00000399804 RASEFQ8IZ41 740 aa16.41■□□□□ 0.22
SCAF4-202ENST00000399804 H7C1W4 665 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 EPB41L2O43491 1005 aaKnown RBP16.4■□□□□ 0.22
SCAF4-202ENST00000399804 F13A1P00488 732 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 IARSP41252 1262 aaKnown RBP16.4■□□□□ 0.22
SCAF4-202ENST00000399804 DNM1Q05193 864 aaKnown RBP16.4■□□□□ 0.22
SCAF4-202ENST00000399804 USP48Q86UV5 1035 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 VSIG10Q8N0Z9 540 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 HAUS7Q99871 368 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 TFCP2L1Q9NZI6 479 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 GPAA1O43292 621 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 MAP3K11Q16584 847 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 UBR1Q8IWV7 1749 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 CCDC183Q5T5S1 534 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
SCAF4-202ENST00000399804 MBD4O95243 580 aa16.39■□□□□ 0.21
SCAF4-202ENST00000399804 GLIPR1L2Q4G1C9 344 aa16.39■□□□□ 0.21
SCAF4-202ENST00000399804 RRAGDQ9NQL2 400 aaPredicted RBP16.39■□□□□ 0.21
SCAF4-202ENST00000399804 SSH2Q76I76 1423 aa16.39■□□□□ 0.21
SCAF4-202ENST00000399804 SOS2Q07890 1332 aaPredicted RBP16.39■□□□□ 0.21
SCAF4-202ENST00000399804 HLFQ16534 295 aa16.39■□□□□ 0.21
SCAF4-202ENST00000399804 CTCFLQ8NI51 663 aaPredicted RBP16.39■□□□□ 0.21
SCAF4-202ENST00000399804 LDHCP07864 332 aa16.38■□□□□ 0.21
SCAF4-202ENST00000399804 ADORA1P30542 326 aa16.38■□□□□ 0.21
SCAF4-202ENST00000399804 UBE2HP62256 183 aa16.38■□□□□ 0.21
SCAF4-202ENST00000399804 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
SCAF4-202ENST00000399804 ZNF444Q8N0Y2 327 aaPredicted RBP16.38■□□□□ 0.21
SCAF4-202ENST00000399804 ZNF622Q969S3 477 aaKnown RBP eCLIP16.38■□□□□ 0.213e-9■■□□□ 12.4
SCAF4-202ENST00000399804 LSG1Q9H089 658 aaKnown RBP16.38■□□□□ 0.21
SCAF4-202ENST00000399804 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
SCAF4-202ENST00000399804 ZBTB43O43298 467 aa16.38■□□□□ 0.21
SCAF4-202ENST00000399804 CRNKL1Q9BZJ0 848 aaKnown RBP16.38■□□□□ 0.21
SCAF4-202ENST00000399804 BAG3O95817 575 aa16.38■□□□□ 0.21
SCAF4-202ENST00000399804 CKAP2LQ8IYA6 745 aa16.38■□□□□ 0.21
SCAF4-202ENST00000399804 SSRP1Q08945 709 aaKnown RBP16.37■□□□□ 0.21
SCAF4-202ENST00000399804 OLFM4Q6UX06 510 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 MROH5Q6ZUA9 1318 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 MAGEB6P1A0A0J9YX57 407 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 TSPY2A6NKD2 308 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 WTAPQ15007 396 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 ZSCAN23Q3MJ62 389 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 TM6SF1Q9BZW5 370 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 CATIPQ7Z7H3 387 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 SPC24Q8NBT2 197 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 KRT23Q9C075 422 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 CCDC39Q9UFE4 941 aa16.37■□□□□ 0.21
SCAF4-202ENST00000399804 MST1RQ04912 1400 aa16.36■□□□□ 0.21
SCAF4-202ENST00000399804 ZNF287Q9HBT7 754 aa16.36■□□□□ 0.21
SCAF4-202ENST00000399804 XRCC6P12956 609 aaKnown RBP eCLIP16.36■□□□□ 0.21
SCAF4-202ENST00000399804 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
SCAF4-202ENST00000399804 PDE8BO95263 885 aa16.36■□□□□ 0.21
SCAF4-202ENST00000399804 PKP1Q13835 747 aa16.36■□□□□ 0.21
SCAF4-202ENST00000399804 ANKRD2Q9GZV1 360 aa16.36■□□□□ 0.21
SCAF4-202ENST00000399804 ADCK5Q3MIX3 580 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 SPATA5Q8NB90 893 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 ESR2Q92731 530 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
SCAF4-202ENST00000399804 CNNM2Q9H8M5 875 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 RXRAP19793 462 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 NOL7Q9UMY1 257 aaKnown RBP16.35■□□□□ 0.21
SCAF4-202ENST00000399804 PTPDC1A2A3K4 754 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 CIAO1O76071 339 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 PDE4BQ07343 736 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 MAP4K1Q92918 833 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 THRAP3Q9Y2W1 955 aaKnown RBP16.35■□□□□ 0.21
SCAF4-202ENST00000399804 ZNF532Q9HCE3 1301 aa16.35■□□□□ 0.21
SCAF4-202ENST00000399804 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 TPM3P06753 285 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 RPS8P62241 208 aaKnown RBP16.34■□□□□ 0.21
SCAF4-202ENST00000399804 USPL1Q5W0Q7 1092 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 GPR108Q9NPR9 543 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 ATP10DQ9P241 1426 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 GNAT2P19087 354 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 PDIA6Q15084 440 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 ZNF589Q86UQ0 364 aaPredicted RBP16.34■□□□□ 0.21
SCAF4-202ENST00000399804 CCDC47Q96A33 483 aaKnown RBP16.34■□□□□ 0.21
SCAF4-202ENST00000399804 ANTXR1Q9H6X2 564 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 C3P01024 1663 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 TTLL5Q6EMB2 1281 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 NCOA5Q9HCD5 579 aaKnown RBP16.34■□□□□ 0.21
SCAF4-202ENST00000399804 SEC31BQ9NQW1 1179 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 B4E1Z4 1266 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 HIBADHP31937 336 aaKnown RBP16.34■□□□□ 0.21
SCAF4-202ENST00000399804 PHKA1P46020 1223 aa16.34■□□□□ 0.21
SCAF4-202ENST00000399804 SOGA3Q5TF21 947 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms