RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 CELF1Q92879 486 aaKnown RBP10.57□□□□□ -0.72
BRCC3-205ENST00000399026 CRAMP1Q96RY5 1269 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 COL4A5P29400 1685 aa10.57□□□□□ -0.72
BRCC3-205ENST00000399026 GRM8O00222 908 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 TRIM27P14373 513 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 BRPF1P55201 1214 aaPredicted RBP10.56□□□□□ -0.72
BRCC3-205ENST00000399026 SF3B3Q15393 1217 aaKnown RBP10.56□□□□□ -0.72
BRCC3-205ENST00000399026 FAM161AQ3B820 660 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 CCDC152Q4G0S7 254 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 C9orf131Q5VYM1 1079 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 C7orf43Q8WVR3 580 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 API5Q9BZZ5 524 aaKnown RBP10.56□□□□□ -0.72
BRCC3-205ENST00000399026 TAOK3Q9H2K8 898 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 GREM2Q9H772 168 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 C9orf78Q9NZ63 289 aaPredicted RBP10.56□□□□□ -0.72
BRCC3-205ENST00000399026 RNF181Q9P0P0 153 aa10.56□□□□□ -0.72
BRCC3-205ENST00000399026 NBPF7P0C2Y1 421 aaPredicted RBP10.55□□□□□ -0.72
BRCC3-205ENST00000399026 EPHA10Q5JZY3 1008 aa10.55□□□□□ -0.72
BRCC3-205ENST00000399026 PPP4R3BQ5MIZ7 849 aa10.55□□□□□ -0.72
BRCC3-205ENST00000399026 SOGA3Q5TF21 947 aa10.55□□□□□ -0.72
BRCC3-205ENST00000399026 CLUAP1Q96AJ1 413 aa10.55□□□□□ -0.72
BRCC3-205ENST00000399026 SUCLG2Q96I99 432 aa10.55□□□□□ -0.72
BRCC3-205ENST00000399026 CHMP3Q9Y3E7 222 aa10.55□□□□□ -0.72
BRCC3-205ENST00000399026 HSP90B1P14625 803 aaKnown RBP10.54□□□□□ -0.72
BRCC3-205ENST00000399026 ATF7IPQ6VMQ6 1270 aa10.54□□□□□ -0.72
BRCC3-205ENST00000399026 SPRYD3Q8NCJ5 442 aa10.54□□□□□ -0.72
BRCC3-205ENST00000399026 TTLL11Q8NHH1 800 aa10.54□□□□□ -0.72
BRCC3-205ENST00000399026 ZNF526Q8TF50 670 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-205ENST00000399026 PLA2G12BQ9BX93 195 aa10.54□□□□□ -0.72
BRCC3-205ENST00000399026 ZNF277Q9NRM2 450 aaPredicted RBP10.54□□□□□ -0.72
BRCC3-205ENST00000399026 EMILIN3Q9NT22 766 aa10.54□□□□□ -0.72
BRCC3-205ENST00000399026 ATP6V0A2Q9Y487 856 aa10.54□□□□□ -0.72
BRCC3-205ENST00000399026 RTL9Q8NET4 1388 aa10.53□□□□□ -0.72
BRCC3-205ENST00000399026 LMNB1P20700 586 aa10.53□□□□□ -0.72
BRCC3-205ENST00000399026 ITGA6P23229 1130 aa10.53□□□□□ -0.72
BRCC3-205ENST00000399026 CCT4P50991 539 aaKnown RBP10.53□□□□□ -0.72
BRCC3-205ENST00000399026 FOXO4P98177 505 aa10.53□□□□□ -0.72
BRCC3-205ENST00000399026 FKBP4Q02790 459 aaKnown RBP eCLIP10.53□□□□□ -0.72
BRCC3-205ENST00000399026 ZKSCAN2Q63HK3 967 aa10.53□□□□□ -0.72
BRCC3-205ENST00000399026 UTYO14607 1347 aa10.53□□□□□ -0.72
BRCC3-205ENST00000399026 LTBP3Q9NS15 1303 aa10.53□□□□□ -0.72
BRCC3-205ENST00000399026 PSEN2P49810 448 aa10.52□□□□□ -0.73
BRCC3-205ENST00000399026 LMBR1LQ6UX01 489 aa10.52□□□□□ -0.73
BRCC3-205ENST00000399026 ANKRD18AQ8IVF6 992 aa10.52□□□□□ -0.73
BRCC3-205ENST00000399026 RTKN2Q8IZC4 609 aa10.52□□□□□ -0.73
BRCC3-205ENST00000399026 ARHGAP45Q92619 1136 aa10.52□□□□□ -0.73
BRCC3-205ENST00000399026 KAZALD1Q96I82 304 aa10.52□□□□□ -0.73
BRCC3-205ENST00000399026 GPR101Q96P66 508 aaPredicted RBP10.52□□□□□ -0.73
BRCC3-205ENST00000399026 MEIS3Q99687 375 aa10.52□□□□□ -0.73
BRCC3-205ENST00000399026 BICC1Q9H694 974 aaKnown RBP10.52□□□□□ -0.73
BRCC3-205ENST00000399026 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
BRCC3-205ENST00000399026 IPO8O15397 1037 aaKnown RBP10.51□□□□□ -0.73
BRCC3-205ENST00000399026 EVI5O60447 810 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 BBOX1O75936 387 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 RLBP1P12271 317 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 RPS8P62241 208 aaKnown RBP10.51□□□□□ -0.73
BRCC3-205ENST00000399026 GPSM2P81274 684 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 DMRTA1Q5VZB9 504 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 DPP8Q6V1X1 898 aaPredicted RBP10.51□□□□□ -0.73
BRCC3-205ENST00000399026 SP8Q8IXZ3 490 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 FTSJ3Q8IY81 847 aaKnown RBP10.51□□□□□ -0.73
BRCC3-205ENST00000399026 TMEM57Q8N5G2 664 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 ANKRD44Q8N8A2 993 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 ZNF454Q8N9F8 522 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 ZNF784Q8NCA9 323 aaPredicted RBP10.51□□□□□ -0.73
BRCC3-205ENST00000399026 CDC5LQ99459 802 aaKnown RBP10.51□□□□□ -0.73
BRCC3-205ENST00000399026 USP44Q9H0E7 712 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 RCAN3Q9UKA8 241 aa10.51□□□□□ -0.73
BRCC3-205ENST00000399026 PLIN1O60240 522 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 CSF1RP07333 972 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 UBTFL1P0CB47 393 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-205ENST00000399026 IARSP41252 1262 aaKnown RBP10.5□□□□□ -0.73
BRCC3-205ENST00000399026 MAP3K9P80192 1104 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 AOC3Q16853 763 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 INTS3Q68E01 1043 aaKnown RBP10.5□□□□□ -0.73
BRCC3-205ENST00000399026 CC2D2BQ6DHV5 1058 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 TMC4Q7Z404 712 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 ITPRIPQ8IWB1 547 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 MPNDQ8N594 471 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 PANK1Q8TE04 598 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 ZNF594Q96JF6 807 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-205ENST00000399026 PSMD1Q99460 953 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 TMX4Q9H1E5 349 aaPredicted RBP10.5□□□□□ -0.73
BRCC3-205ENST00000399026 LRRFIP2Q9Y608 721 aaKnown RBP10.5□□□□□ -0.73
BRCC3-205ENST00000399026 ZNF541Q9H0D2 1346 aa10.5□□□□□ -0.73
BRCC3-205ENST00000399026 ANKRD18BA2A2Z9 1011 aa10.49□□□□□ -0.73
BRCC3-205ENST00000399026 PPIP5K2O43314 1243 aa10.49□□□□□ -0.73
BRCC3-205ENST00000399026 UFL1O94874 794 aa10.49□□□□□ -0.73
BRCC3-205ENST00000399026 IGHMBP2P38935 993 aaKnown RBP10.49□□□□□ -0.73
BRCC3-205ENST00000399026 FOSBP53539 338 aa10.49□□□□□ -0.73
BRCC3-205ENST00000399026 ADGRD1Q6QNK2 874 aa10.49□□□□□ -0.73
BRCC3-205ENST00000399026 DZIP1LQ8IYY4 767 aaKnown RBP10.49□□□□□ -0.73
BRCC3-205ENST00000399026 NSFL1CQ9UNZ2 370 aaKnown RBP10.49□□□□□ -0.73
BRCC3-205ENST00000399026 ZNF646O15015 1829 aaPredicted RBP10.49□□□□□ -0.73
BRCC3-205ENST00000399026 WDR90Q96KV7 1748 aa10.48□□□□□ -0.73
BRCC3-205ENST00000399026 C6orf229H3BNL8 230 aa10.48□□□□□ -0.73
BRCC3-205ENST00000399026 IFIT5Q13325 482 aaKnown RBP10.48□□□□□ -0.73
BRCC3-205ENST00000399026 RABL6Q3YEC7 729 aaPredicted RBP10.48□□□□□ -0.73
BRCC3-205ENST00000399026 TAF7LQ5H9L4 462 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms