RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 ZSCAN31Q96LW9 406 aaPredicted RBP11.63□□□□□ -0.55
CAPN11-201ENST00000398776 TEX13AQ9BXU3 409 aaPredicted RBP11.63□□□□□ -0.55
CAPN11-201ENST00000398776 GPR108Q9NPR9 543 aa11.63□□□□□ -0.55
CAPN11-201ENST00000398776 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
CAPN11-201ENST00000398776 TLR7Q9NYK1 1049 aaKnown RBP11.63□□□□□ -0.55
CAPN11-201ENST00000398776 MED23Q9ULK4 1368 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 ATP5J2-PTCD1G3V325 749 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 PTCD1O75127 700 aaKnown RBP11.62□□□□□ -0.55
CAPN11-201ENST00000398776 GJB2P29033 226 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 PIP4K2AP48426 406 aaPredicted RBP11.62□□□□□ -0.55
CAPN11-201ENST00000398776 RUFY3Q7L099 469 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 CCDC83Q8IWF9 413 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 KLHDC4Q8TBB5 520 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 ATG3Q9NT62 314 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 NPHP1O15259 732 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 FOXO4P98177 505 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 TYRO3Q06418 890 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 NMIQ13287 307 aaPredicted RBP11.62□□□□□ -0.55
CAPN11-201ENST00000398776 MAP3K11Q16584 847 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 ANO6Q4KMQ2 910 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 CEP135Q66GS9 1140 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 FBXO38Q6PIJ6 1188 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.62□□□□□ -0.55
CAPN11-201ENST00000398776 FSD1Q9BTV5 496 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 RASSF4Q9H2L5 321 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 BOLA2Q9H3K6 86 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 SH2B1Q9NRF2 756 aaPredicted RBP11.62□□□□□ -0.55
CAPN11-201ENST00000398776 MRVI1Q9Y6F6 885 aa11.62□□□□□ -0.55
CAPN11-201ENST00000398776 CASTP20810 708 aaKnown RBP11.61□□□□□ -0.55
CAPN11-201ENST00000398776 PSMA5P28066 241 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 PSEN1P49768 467 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 DBNLQ9UJU6 430 aaKnown RBP11.61□□□□□ -0.55
CAPN11-201ENST00000398776 CYP46A1Q9Y6A2 500 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 LARGE1O95461 756 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 TNNT3P45378 269 aaPredicted RBP11.61□□□□□ -0.55
CAPN11-201ENST00000398776 TFCP2Q12800 502 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 TMEM132AQ24JP5 1023 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 TSGA10IPQ3SY00 556 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 PRPF40BQ6NWY9 871 aaKnown RBP11.61□□□□□ -0.55
CAPN11-201ENST00000398776 LMBR1LQ6UX01 489 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.61□□□□□ -0.55
CAPN11-201ENST00000398776 TXLNBQ8N3L3 684 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 NUP62CLQ9H1M0 184 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 ALDH8A1Q9H2A2 487 aaPredicted RBP11.61□□□□□ -0.55
CAPN11-201ENST00000398776 CBX8Q9HC52 389 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 HMG20BQ9P0W2 317 aa11.61□□□□□ -0.55
CAPN11-201ENST00000398776 RBM8AQ9Y5S9 174 aaKnown RBP11.61□□□□□ -0.55
CAPN11-201ENST00000398776 LIG1P18858 919 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 CREB3L3Q68CJ9 461 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 FAM173BQ6P4H8 233 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 TTLL7Q6ZT98 887 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 FERMT3Q86UX7 667 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 CACTINQ8WUQ7 758 aaKnown RBP11.6□□□□□ -0.55
CAPN11-201ENST00000398776 FAM227BQ96M60 508 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 TRERF1Q96PN7 1200 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 ST7Q9NRC1 585 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 CLIP2Q9UDT6 1046 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 ZNF215Q9UL58 517 aaPredicted RBP11.6□□□□□ -0.55
CAPN11-201ENST00000398776 COL14A1Q05707 1796 aaKnown RBP11.6□□□□□ -0.55
CAPN11-201ENST00000398776 TRIM28Q13263 835 aaKnown RBP11.6□□□□□ -0.55
CAPN11-201ENST00000398776 DDX54Q8TDD1 881 aaKnown RBP11.6□□□□□ -0.55
CAPN11-201ENST00000398776 JAKMIP1Q96N16 626 aaKnown RBP11.6□□□□□ -0.55
CAPN11-201ENST00000398776 TNMDQ9H2S6 317 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 PDRG1Q9NUG6 133 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 ZNF446Q9NWS9 450 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 TMOD3Q9NYL9 352 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 RSPH14Q9UHP6 348 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 MTMR6Q9Y217 621 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 ITGB4P16144 1822 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 SPEF2Q9C093 1822 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 LRP6O75581 1613 aa11.6□□□□□ -0.55
CAPN11-201ENST00000398776 DHX16O60231 1041 aaKnown RBP11.59□□□□□ -0.55
CAPN11-201ENST00000398776 A1BGP04217 495 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 H2AFXP16104 143 aaPredicted RBP11.59□□□□□ -0.55
CAPN11-201ENST00000398776 HAUS7Q99871 368 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 STRN4Q9NRL3 753 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 PLCH1Q4KWH8 1693 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 A0A0D9SFI3 127 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 CLGNO14967 610 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 CIAO1O76071 339 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 IL15P40933 162 aaPredicted RBP11.59□□□□□ -0.55
CAPN11-201ENST00000398776 ZNF75DP51815 510 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 TEX35Q5T0J7 233 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 USPL1Q5W0Q7 1092 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 TTC6Q86TZ1 520 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 ISCA1Q9BUE6 129 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 GOLGA6L4A6NEF3 574 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 USP27XA6NNY8 438 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 SLC27A2O14975 620 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 ANKRD1Q15327 319 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 CCDC144BQ3MJ40 725 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 AXDND1Q5T1B0 1012 aaPredicted RBP11.59□□□□□ -0.55
CAPN11-201ENST00000398776 CCDC144CPQ8IYA2 1237 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 BRMS1Q9HCU9 246 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 DACT1Q9NYF0 836 aa11.59□□□□□ -0.55
CAPN11-201ENST00000398776 ELF2Q15723 593 aa11.58□□□□□ -0.56
CAPN11-201ENST00000398776 ADCK5Q3MIX3 580 aa11.58□□□□□ -0.56
CAPN11-201ENST00000398776 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
CAPN11-201ENST00000398776 ATG9AQ7Z3C6 839 aa11.58□□□□□ -0.56
CAPN11-201ENST00000398776 PLA2G4DQ86XP0 818 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms