RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 FAM177BA6PVY3 158 aa17.81■□□□□ 0.44
CBX3-202ENST00000396386 M0R2C6 588 aa17.81■□□□□ 0.44
CBX3-202ENST00000396386 PRPF40AO75400 957 aaKnown RBP17.81■□□□□ 0.44
CBX3-202ENST00000396386 ZAP70P43403 619 aa17.81■□□□□ 0.44
CBX3-202ENST00000396386 ST3GAL1Q11201 340 aa17.81■□□□□ 0.44
CBX3-202ENST00000396386 PUM3Q15397 648 aaKnown RBP17.81■□□□□ 0.44
CBX3-202ENST00000396386 SLFNL1Q499Z3 407 aa17.81■□□□□ 0.44
CBX3-202ENST00000396386 LINC00116Q8NCU8 138 aa17.81■□□□□ 0.44
CBX3-202ENST00000396386 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
CBX3-202ENST00000396386 STX6O43752 255 aa17.8■□□□□ 0.44
CBX3-202ENST00000396386 ZSCAN22P10073 491 aaPredicted RBP17.8■□□□□ 0.44
CBX3-202ENST00000396386 GJB2P29033 226 aa17.8■□□□□ 0.44
CBX3-202ENST00000396386 COL9A3Q14050 684 aaPredicted RBP17.8■□□□□ 0.44
CBX3-202ENST00000396386 TOB2Q14106 344 aaPredicted RBP17.8■□□□□ 0.44
CBX3-202ENST00000396386 CCDC152Q4G0S7 254 aa17.8■□□□□ 0.44
CBX3-202ENST00000396386 MYO5AQ9Y4I1 1855 aaKnown RBP17.8■□□□□ 0.44
CBX3-202ENST00000396386 LY75O60449 1722 aa17.8■□□□□ 0.44
CBX3-202ENST00000396386 ATRNO75882 1429 aa17.8■□□□□ 0.44
CBX3-202ENST00000396386 HSPD1P10809 573 aaKnown RBP17.8■□□□□ 0.44
CBX3-202ENST00000396386 TCEANC2Q96MN5 208 aa17.8■□□□□ 0.44
CBX3-202ENST00000396386 USP21Q9UK80 565 aa17.8■□□□□ 0.44
CBX3-202ENST00000396386 TAF1LQ8IZX4 1826 aa17.79■□□□□ 0.44
CBX3-202ENST00000396386 HMGB1P09429 215 aaKnown RBP17.79■□□□□ 0.44
CBX3-202ENST00000396386 SYT1P21579 422 aa17.79■□□□□ 0.44
CBX3-202ENST00000396386 MCAMP43121 646 aa17.79■□□□□ 0.44
CBX3-202ENST00000396386 LPIN2Q92539 896 aa17.79■□□□□ 0.44
CBX3-202ENST00000396386 APPBP2Q92624 585 aa17.79■□□□□ 0.44
CBX3-202ENST00000396386 CHAMP1Q96JM3 812 aa17.79■□□□□ 0.44
CBX3-202ENST00000396386 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.79■□□□□ 0.44
CBX3-202ENST00000396386 UQCRFS1P1P0C7P4 283 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 ARID4AP29374 1257 aaPredicted RBP17.78■□□□□ 0.44
CBX3-202ENST00000396386 MRE11P49959 708 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 TTF1Q15361 905 aaPredicted RBP17.78■□□□□ 0.44
CBX3-202ENST00000396386 WASHC4Q2M389 1173 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 ZSCAN25Q6NSZ9 544 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 CLEC4GQ6UXB4 293 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 NECAB1Q8N987 351 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 OSBP2Q969R2 916 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 SBF2Q86WG5 1849 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 MBD3O95983 291 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 SLC5A1P13866 664 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 NCLP19338 710 aaKnown RBP17.78■□□□□ 0.44
CBX3-202ENST00000396386 FGFR2P21802 821 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 PI16Q6UXB8 463 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 STOX1Q6ZVD7 989 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 MPHOSPH8Q99549 860 aa17.78■□□□□ 0.44
CBX3-202ENST00000396386 RGL2O15211 777 aa17.77■□□□□ 0.43
CBX3-202ENST00000396386 BRPF3Q9ULD4 1205 aa17.77■□□□□ 0.43
CBX3-202ENST00000396386 ATP6V1DQ9Y5K8 247 aa17.77■□□□□ 0.43
CBX3-202ENST00000396386 TCHHQ07283 1943 aa17.77■□□□□ 0.43
CBX3-202ENST00000396386 F13A1P00488 732 aa17.76■□□□□ 0.43
CBX3-202ENST00000396386 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
CBX3-202ENST00000396386 IGHMBP2P38935 993 aaKnown RBP17.76■□□□□ 0.43
CBX3-202ENST00000396386 CCDC102BQ68D86 513 aa17.76■□□□□ 0.43
CBX3-202ENST00000396386 CAVIN1Q6NZI2 390 aaKnown RBP17.76■□□□□ 0.43
CBX3-202ENST00000396386 PHKA1P46020 1223 aa17.75■□□□□ 0.43
CBX3-202ENST00000396386 Q6ZUG5 572 aa17.75■□□□□ 0.43
CBX3-202ENST00000396386 GPT2Q8TD30 523 aa17.75■□□□□ 0.43
CBX3-202ENST00000396386 GRPEL1Q9HAV7 217 aa17.75■□□□□ 0.43
CBX3-202ENST00000396386 SEC31BQ9NQW1 1179 aa17.75■□□□□ 0.43
CBX3-202ENST00000396386 CTNNA3Q9UI47 895 aa17.75■□□□□ 0.43
CBX3-202ENST00000396386 C4AP0C0L4 1744 aa17.75■□□□□ 0.43
CBX3-202ENST00000396386 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
CBX3-202ENST00000396386 HELBQ8NG08 1087 aaPredicted RBP17.75■□□□□ 0.43
CBX3-202ENST00000396386 COL4A1P02462 1669 aa17.74■□□□□ 0.43
CBX3-202ENST00000396386 XRCC6P12956 609 aaKnown RBP eCLIP17.74■□□□□ 0.43
CBX3-202ENST00000396386 PDCP20941 246 aa17.74■□□□□ 0.43
CBX3-202ENST00000396386 ADD2P35612 726 aa17.74■□□□□ 0.43
CBX3-202ENST00000396386 DHX32Q7L7V1 743 aaKnown RBP17.74■□□□□ 0.43
CBX3-202ENST00000396386 MTMR6Q9Y217 621 aa17.74■□□□□ 0.43
CBX3-202ENST00000396386 E7EWF7 191 aa17.73■□□□□ 0.43
CBX3-202ENST00000396386 ZNF445P59923 1031 aa17.73■□□□□ 0.43
CBX3-202ENST00000396386 FGD1P98174 961 aa17.73■□□□□ 0.43
CBX3-202ENST00000396386 RC3H1Q5TC82 1133 aaKnown RBP17.73■□□□□ 0.43
CBX3-202ENST00000396386 TMEM87AQ8NBN3 555 aa17.73■□□□□ 0.43
CBX3-202ENST00000396386 GTF3C6Q969F1 213 aa17.73■□□□□ 0.43
CBX3-202ENST00000396386 PIH1D3Q9NQM4 214 aaKnown RBP17.73■□□□□ 0.43
CBX3-202ENST00000396386 FOXD4L6Q3SYB3 417 aaPredicted RBP17.73■□□□□ 0.43
CBX3-202ENST00000396386 FOXD4L3Q6VB84 417 aaPredicted RBP17.73■□□□□ 0.43
CBX3-202ENST00000396386 CDC5LQ99459 802 aaKnown RBP17.73■□□□□ 0.43
CBX3-202ENST00000396386 VPS37CA5D8V6 355 aaPredicted RBP17.72■□□□□ 0.43
CBX3-202ENST00000396386 GPAA1O43292 621 aa17.72■□□□□ 0.43
CBX3-202ENST00000396386 STK3Q13188 491 aa17.72■□□□□ 0.43
CBX3-202ENST00000396386 IMMTQ16891 758 aaKnown RBP17.72■□□□□ 0.43
CBX3-202ENST00000396386 ZSCAN23Q3MJ62 389 aa17.72■□□□□ 0.43
CBX3-202ENST00000396386 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
CBX3-202ENST00000396386 PTF1AQ7RTS3 328 aa17.72■□□□□ 0.43
CBX3-202ENST00000396386 GAS2L3Q86XJ1 694 aa17.72■□□□□ 0.43
CBX3-202ENST00000396386 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
CBX3-202ENST00000396386 FOXP2O15409 715 aa17.71■□□□□ 0.43
CBX3-202ENST00000396386 KCNQ4P56696 695 aa17.71■□□□□ 0.43
CBX3-202ENST00000396386 UBE3CQ15386 1083 aa17.71■□□□□ 0.43
CBX3-202ENST00000396386 BRF1Q92994 677 aa17.71■□□□□ 0.43
CBX3-202ENST00000396386 A0A0G2JLW4 131 aa17.71■□□□□ 0.43
CBX3-202ENST00000396386 RPS6KA4O75676 772 aa17.71■□□□□ 0.43
CBX3-202ENST00000396386 IDH1O75874 414 aaKnown RBP17.71■□□□□ 0.43
CBX3-202ENST00000396386 ERFEQ4G0M1 354 aa17.71■□□□□ 0.43
CBX3-202ENST00000396386 SLC9C2Q5TAH2 1124 aa17.71■□□□□ 0.43
CBX3-202ENST00000396386 LARP1BQ659C4 914 aaKnown RBP17.71■□□□□ 0.43
CBX3-202ENST00000396386 TTLL5Q6EMB2 1281 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms