RNA–Protein interactions for RNA: ENST00000396060.6

GTF2A2-202, Transcript of general transcription factor IIA subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A2, Length 1,582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2-202ENST00000396060 TAF5LO75529 589 aa14.32□□□□□ -0.12
GTF2A2-202ENST00000396060 PHKA1P46020 1223 aa14.32□□□□□ -0.12
GTF2A2-202ENST00000396060 PTH1RQ03431 593 aa14.32□□□□□ -0.12
GTF2A2-202ENST00000396060 GRAPQ13588 217 aa14.32□□□□□ -0.12
GTF2A2-202ENST00000396060 GRAPLQ8TC17 118 aaPredicted RBP14.32□□□□□ -0.12
GTF2A2-202ENST00000396060 NDUFB9Q9Y6M9 179 aa14.32□□□□□ -0.12
GTF2A2-202ENST00000396060 ZNF804BA4D1E1 1349 aa14.32□□□□□ -0.12
GTF2A2-202ENST00000396060 ZAP70P43403 619 aa14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 TSGA10IPQ3SY00 556 aa14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 TM6SF1Q9BZW5 370 aa14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 ANTXR1Q9H6X2 564 aa14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 NRXN2Q9P2S2 1712 aa14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 PALD1Q9ULE6 856 aa14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 A0A1B0GUL6 1792 aa14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 PNPLA7Q6ZV29 1317 aa14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 TNRC6CQ9HCJ0 1690 aaKnown RBP14.31□□□□□ -0.12
GTF2A2-202ENST00000396060 ST18O60284 1047 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 FKBP4Q02790 459 aaKnown RBP eCLIP14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 ZSCAN25Q6NSZ9 544 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 CRAMP1Q96RY5 1269 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 HMG20BQ9P0W2 317 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 K7ELQ4 463 aaPredicted RBP14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 NPHP1O15259 732 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 CYP2E1P05181 493 aaPredicted RBP14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 MCM2P49736 904 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 FBXO33Q7Z6M2 555 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 ZNF589Q86UQ0 364 aaPredicted RBP14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 SPATA5Q8NB90 893 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 BRIP1Q9BX63 1249 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 SNX14Q9Y5W7 946 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 TAF1P21675 1872 aa14.3□□□□□ -0.12
GTF2A2-202ENST00000396060 QSER1Q2KHR3 1735 aa14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 SEMA3EO15041 775 aa14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 BBOX1O75936 387 aa14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 UBE3CQ15386 1083 aa14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 SLC15A2Q16348 729 aa14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 C15orf52Q6ZUT6 534 aaKnown RBP14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 TMC4Q7Z404 712 aa14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 CCDC24Q8N4L8 307 aa14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 RBM17Q96I25 401 aaKnown RBP14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 DSCC1Q9BVC3 393 aa14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 GNL3LQ9NVN8 582 aaKnown RBP14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 RBM8AQ9Y5S9 174 aaKnown RBP14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 PDS5AQ29RF7 1337 aaKnown RBP14.29□□□□□ -0.12
GTF2A2-202ENST00000396060 SNAP23O00161 211 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 IGSF3O75054 1194 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 CD2BP2O95400 341 aaKnown RBP14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 BCAMP50895 628 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 RASGRF1Q13972 1273 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 EZH2Q15910 746 aaKnown RBP14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 ERICH6Q7L0X2 663 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 RASEFQ8IZ41 740 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 APPBP2Q92624 585 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 FAM84BQ96KN1 310 aaPredicted RBP14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 LEMD3Q9Y2U8 911 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 U3KPZ7 1027 aaPredicted RBP14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 IRS2Q9Y4H2 1338 aa14.28□□□□□ -0.12
GTF2A2-202ENST00000396060 ADD2P35612 726 aa14.27□□□□□ -0.12
GTF2A2-202ENST00000396060 EN1Q05925 392 aaPredicted RBP14.27□□□□□ -0.12
GTF2A2-202ENST00000396060 RNF20Q5VTR2 975 aa14.27□□□□□ -0.12
GTF2A2-202ENST00000396060 CREB3L3Q68CJ9 461 aa14.27□□□□□ -0.12
GTF2A2-202ENST00000396060 PI16Q6UXB8 463 aa14.27□□□□□ -0.12
GTF2A2-202ENST00000396060 RPGRQ92834 1020 aaKnown RBP14.27□□□□□ -0.12
GTF2A2-202ENST00000396060 ZKSCAN1P17029 563 aaPredicted RBP14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 NEK4P51957 841 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 CAVIN4Q5BKX8 364 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 TMED8Q6PL24 325 aaPredicted RBP14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 OSBP2Q969R2 916 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 SEC62Q99442 399 aaKnown RBP14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 PIH1D3Q9NQM4 214 aaKnown RBP14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 STK32BQ9NY57 414 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 MYH7P12883 1935 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 SLC27A2O14975 620 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 DDIT3P35638 169 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 BAG6P46379 1132 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 PRPF40BQ6NWY9 871 aaKnown RBP14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 CCDC125Q86Z20 511 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 ALDH8A1Q9H2A2 487 aaPredicted RBP14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 ZSWIM6Q9HCJ5 1215 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 MAST3O60307 1309 aa14.26□□□□□ -0.13
GTF2A2-202ENST00000396060 TCRBV5S4A2TA0A5A2 114 aa14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 CHGBP05060 677 aa14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 TTC14Q96N46 770 aa14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 ANO8Q9HCE9 1232 aaPredicted RBP14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 PODXL2Q9NZ53 605 aa14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 DENND2AQ9ULE3 1009 aa14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 PARP3Q9Y6F1 533 aa14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 XDHP47989 1333 aa14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 DOCK2Q92608 1830 aa14.25□□□□□ -0.13
GTF2A2-202ENST00000396060 MMP10P09238 476 aa14.24□□□□□ -0.13
GTF2A2-202ENST00000396060 HSPD1P10809 573 aaKnown RBP14.24□□□□□ -0.13
GTF2A2-202ENST00000396060 PSMA5P28066 241 aa14.24□□□□□ -0.13
GTF2A2-202ENST00000396060 PDE6BP35913 854 aa14.24□□□□□ -0.13
GTF2A2-202ENST00000396060 MAP3K12Q12852 859 aa14.24□□□□□ -0.13
GTF2A2-202ENST00000396060 SF3B2Q13435 895 aaKnown RBP14.24□□□□□ -0.13
GTF2A2-202ENST00000396060 KRT32Q14532 448 aa14.24□□□□□ -0.13
GTF2A2-202ENST00000396060 SLC9C2Q5TAH2 1124 aa14.24□□□□□ -0.13
GTF2A2-202ENST00000396060 RPAP1Q9BWH6 1393 aaPredicted RBP14.23□□□□□ -0.13
GTF2A2-202ENST00000396060 M0R2C6 588 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms