RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 LRRC69Q6ZNQ3 347 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 CERS3Q8IU89 383 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 ZNF295-AS1Q8N0V1 137 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 MTMR14Q8NCE2 650 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 BHLHE22Q8NFJ8 381 aaPredicted RBP4.4□□□□□ -1.71
XRCC4-203ENST00000396027 FAM13BQ9NYF5 915 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 NDUFB9Q9Y6M9 179 aa4.4□□□□□ -1.71
XRCC4-203ENST00000396027 RSF1Q96T23 1441 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-203ENST00000396027 CCDC196A0A1B0GTZ2 297 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 CDK2AP1O14519 115 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 PPP1R12AO14974 1030 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-203ENST00000396027 ZRANB2O95218 330 aaKnown RBP eCLIP4.39□□□□□ -1.71
XRCC4-203ENST00000396027 PRNPP04156 253 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 INHAP05111 366 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 USP4Q13107 963 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 SYCP1Q15431 976 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 PCSK7Q16549 785 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 CCDC91Q7Z6B0 441 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 TP53INP2Q8IXH6 220 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 TOX2Q96NM4 488 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 TMX4Q9H1E5 349 aaPredicted RBP4.39□□□□□ -1.71
XRCC4-203ENST00000396027 C7orf69Q9H7B7 122 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 DONSONQ9NYP3 566 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 FRRS1LQ9P0K9 344 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 ANAPC4Q9UJX5 808 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 ZMYM3Q14202 1370 aa4.39□□□□□ -1.71
XRCC4-203ENST00000396027 BIN1O00499 593 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 CTAGE5O15320 804 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 DEAF1O75398 565 aaPredicted RBP4.38□□□□□ -1.71
XRCC4-203ENST00000396027 IPO7O95373 1038 aaKnown RBP4.38□□□□□ -1.71
XRCC4-203ENST00000396027 VSIG10LQ86VR7 867 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 SIAH1Q8IUQ4 282 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 EXOC8Q8IYI6 725 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 MSL3Q8N5Y2 521 aaKnown RBP4.38□□□□□ -1.71
XRCC4-203ENST00000396027 AGBL5Q8NDL9 886 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 BHMTQ93088 406 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 ITFG2Q969R8 447 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 PPP1R9BQ96SB3 815 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 DEF6Q9H4E7 631 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 SRA1Q9HD15 236 aaKnown RBP4.38□□□□□ -1.71
XRCC4-203ENST00000396027 OGFRQ9NZT2 677 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 CABP1Q9NZU7 370 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 CWC15Q9P013 229 aaKnown RBP4.38□□□□□ -1.71
XRCC4-203ENST00000396027 CCDC39Q9UFE4 941 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 ZHX1Q9UKY1 873 aaPredicted RBP4.38□□□□□ -1.71
XRCC4-203ENST00000396027 KCNH4Q9UQ05 1017 aa4.38□□□□□ -1.71
XRCC4-203ENST00000396027 SMG6Q86US8 1419 aaKnown RBP4.38□□□□□ -1.71
XRCC4-203ENST00000396027 XRCC6P12956 609 aaKnown RBP eCLIP4.37□□□□□ -1.71
XRCC4-203ENST00000396027 GRNP28799 593 aaKnown RBP4.37□□□□□ -1.71
XRCC4-203ENST00000396027 USP8P40818 1118 aa4.37□□□□□ -1.71
XRCC4-203ENST00000396027 CHAF1AQ13111 956 aaPredicted RBP4.37□□□□□ -1.71
XRCC4-203ENST00000396027 RABEP1Q15276 862 aa4.37□□□□□ -1.71
XRCC4-203ENST00000396027 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.37□□□□□ -1.71
XRCC4-203ENST00000396027 ZSCAN18Q8TBC5 510 aaPredicted RBP4.37□□□□□ -1.71
XRCC4-203ENST00000396027 SIRT1Q96EB6 747 aa4.37□□□□□ -1.71
XRCC4-203ENST00000396027 CDCA7Q9BWT1 371 aaPredicted RBP4.37□□□□□ -1.71
XRCC4-203ENST00000396027 CEP41Q9BYV8 373 aa4.37□□□□□ -1.71
XRCC4-203ENST00000396027 SUDS3Q9H7L9 328 aaPredicted RBP4.37□□□□□ -1.71
XRCC4-203ENST00000396027 DIAPH3Q9NSV4 1193 aa4.37□□□□□ -1.71
XRCC4-203ENST00000396027 KCNG1Q9UIX4 513 aa4.37□□□□□ -1.71
XRCC4-203ENST00000396027 NOL7Q9UMY1 257 aaKnown RBP4.37□□□□□ -1.71
XRCC4-203ENST00000396027 KIF16BQ96L93 1317 aa4.37□□□□□ -1.71
XRCC4-203ENST00000396027 PPP1R15AO75807 674 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 ARID4AP29374 1257 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 TDO2P48775 406 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 GTF2A1P52655 376 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 HNRNPUQ00839 825 aaKnown RBP eCLIP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 MTA1Q13330 715 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 GRIK5Q16478 980 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 CDC37Q16543 378 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 CAVIN1Q6NZI2 390 aaKnown RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 FAM43BQ6ZT52 329 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 ZNF771Q7L3S4 317 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 TRIM42Q8IWZ5 723 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 SHKBP1Q8TBC3 707 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 TTC9Q92623 222 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 TSPAN18Q96SJ8 248 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 IGFLR1Q9H665 355 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 GRPEL1Q9HAV7 217 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 BRD7Q9NPI1 651 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 DNAJB12Q9NXW2 375 aaKnown RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 SH3BP1Q9Y3L3 701 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 CUX2O14529 1486 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 UQCRHLA0A096LP55 91 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 PES1O00541 588 aaKnown RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 MPHOSPH10O00566 681 aaKnown RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 PAPLNO95428 1278 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 UQCRHP07919 91 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 PEX19P40855 299 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 GDF10P55107 478 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 IRX6P78412 446 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 GPS2Q13227 327 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 ICE2Q659A1 982 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 DBX2Q6ZNG2 339 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 TTLL10Q6ZVT0 673 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 MAP4K3Q8IVH8 894 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 MYRIPQ8NFW9 859 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 GIMAP7Q8NHV1 300 aa4.36□□□□□ -1.71
XRCC4-203ENST00000396027 ERCC4Q92889 916 aaPredicted RBP4.36□□□□□ -1.71
XRCC4-203ENST00000396027 PRDM16Q9HAZ2 1276 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms