RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 FBXO3Q9UK99 471 aa24.75■■□□□ 1.55
SNCA-203ENST00000394986 PSMD14O00487 310 aa24.74■■□□□ 1.55
SNCA-203ENST00000394986 KIF3CO14782 793 aa24.74■■□□□ 1.55
SNCA-203ENST00000394986 IL15P40933 162 aaPredicted RBP24.74■■□□□ 1.55
SNCA-203ENST00000394986 C15orf52Q6ZUT6 534 aaKnown RBP24.74■■□□□ 1.55
SNCA-203ENST00000394986 L3MBTL3Q96JM7 780 aaPredicted RBP24.74■■□□□ 1.55
SNCA-203ENST00000394986 SUPT16HQ9Y5B9 1047 aaKnown RBP24.74■■□□□ 1.55
SNCA-203ENST00000394986 WDR90Q96KV7 1748 aa24.73■■□□□ 1.55
SNCA-203ENST00000394986 CRBNQ96SW2 442 aa24.73■■□□□ 1.55
SNCA-203ENST00000394986 COA1Q9GZY4 146 aa24.73■■□□□ 1.55
SNCA-203ENST00000394986 GYG1P46976 350 aa24.72■■□□□ 1.55
SNCA-203ENST00000394986 PUM3Q15397 648 aaKnown RBP24.72■■□□□ 1.55
SNCA-203ENST00000394986 CHMP4BQ9H444 224 aaKnown RBP24.72■■□□□ 1.55
SNCA-203ENST00000394986 CEP126Q9P2H0 1117 aa24.72■■□□□ 1.55
SNCA-203ENST00000394986 ZBTB12Q9Y330 459 aaPredicted RBP24.72■■□□□ 1.55
SNCA-203ENST00000394986 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.72■■□□□ 1.55
SNCA-203ENST00000394986 FGFR2P21802 821 aa24.71■■□□□ 1.55
SNCA-203ENST00000394986 TNIP1Q15025 636 aa24.71■■□□□ 1.55
SNCA-203ENST00000394986 PODNQ7Z5L7 613 aa24.71■■□□□ 1.55
SNCA-203ENST00000394986 SCN9AQ15858 1988 aa24.7■■□□□ 1.55
SNCA-203ENST00000394986 GMPSP49915 693 aaPredicted RBP24.7■■□□□ 1.55
SNCA-203ENST00000394986 SCNN1DP51172 638 aa24.7■■□□□ 1.55
SNCA-203ENST00000394986 TFCP2Q12800 502 aa24.7■■□□□ 1.55
SNCA-203ENST00000394986 SIRT2Q8IXJ6 389 aa24.7■■□□□ 1.55
SNCA-203ENST00000394986 CD209Q9NNX6 404 aa24.7■■□□□ 1.55
SNCA-203ENST00000394986 VEGFAP15692 232 aaPredicted RBP24.69■■□□□ 1.54
SNCA-203ENST00000394986 G3BP1Q13283 466 aaKnown RBP eCLIP24.69■■□□□ 1.54
SNCA-203ENST00000394986 ZNF804AQ7Z570 1209 aa24.69■■□□□ 1.54
SNCA-203ENST00000394986 FBXW7Q969H0 707 aa24.69■■□□□ 1.54
SNCA-203ENST00000394986 FAM84BQ96KN1 310 aaPredicted RBP24.69■■□□□ 1.54
SNCA-203ENST00000394986 SURF6O75683 361 aaKnown RBP24.69■■□□□ 1.54
SNCA-203ENST00000394986 ATP2B3Q16720 1220 aa24.69■■□□□ 1.54
SNCA-203ENST00000394986 RPAP2Q8IXW5 612 aaPredicted RBP24.68■■□□□ 1.54
SNCA-203ENST00000394986 LPIN2Q92539 896 aa24.68■■□□□ 1.54
SNCA-203ENST00000394986 MXD3Q9BW11 206 aa24.68■■□□□ 1.54
SNCA-203ENST00000394986 SHTN1A0MZ66 631 aa24.67■■□□□ 1.54
SNCA-203ENST00000394986 SASH1O94885 1247 aa24.67■■□□□ 1.54
SNCA-203ENST00000394986 VIL1P09327 827 aaKnown RBP24.67■■□□□ 1.54
SNCA-203ENST00000394986 IFIT1P09914 478 aaKnown RBP24.67■■□□□ 1.54
SNCA-203ENST00000394986 SLC5A1P13866 664 aa24.67■■□□□ 1.54
SNCA-203ENST00000394986 HIBADHP31937 336 aaKnown RBP24.67■■□□□ 1.54
SNCA-203ENST00000394986 EPS15P42566 896 aa24.67■■□□□ 1.54
SNCA-203ENST00000394986 OS9Q13438 667 aaPredicted RBP24.67■■□□□ 1.54
SNCA-203ENST00000394986 HACL1Q9UJ83 578 aa24.67■■□□□ 1.54
SNCA-203ENST00000394986 IQCA1LA6NCM1 817 aa24.66■■□□□ 1.54
SNCA-203ENST00000394986 USP17L3A6NCW0 530 aa24.66■■□□□ 1.54
SNCA-203ENST00000394986 USP17L4A6NCW7 530 aa24.66■■□□□ 1.54
SNCA-203ENST00000394986 BCAMP50895 628 aa24.66■■□□□ 1.54
SNCA-203ENST00000394986 USP17L1Q7RTZ2 530 aa24.66■■□□□ 1.54
SNCA-203ENST00000394986 TAF1DQ9H5J8 278 aaPredicted RBP24.66■■□□□ 1.54
SNCA-203ENST00000394986 IQSEC3Q9UPP2 1182 aaPredicted RBP24.66■■□□□ 1.54
SNCA-203ENST00000394986 JAG2Q9Y219 1238 aa24.66■■□□□ 1.54
SNCA-203ENST00000394986 EXOC6BQ9Y2D4 811 aa24.66■■□□□ 1.54
SNCA-203ENST00000394986 IL1R1P14778 569 aa24.65■■□□□ 1.54
SNCA-203ENST00000394986 LMOD1P29536 600 aaPredicted RBP24.65■■□□□ 1.54
SNCA-203ENST00000394986 GTF2IP78347 998 aa24.65■■□□□ 1.54
SNCA-203ENST00000394986 DACT2Q5SW24 774 aa24.65■■□□□ 1.54
SNCA-203ENST00000394986 GPRC5DQ9NZD1 345 aa24.65■■□□□ 1.54
SNCA-203ENST00000394986 NOP58Q9Y2X3 529 aaKnown RBP24.65■■□□□ 1.54
SNCA-203ENST00000394986 POTEIP0CG38 1075 aa24.64■■□□□ 1.54
SNCA-203ENST00000394986 POTEJP0CG39 1038 aa24.64■■□□□ 1.54
SNCA-203ENST00000394986 ADORA1P30542 326 aa24.64■■□□□ 1.54
SNCA-203ENST00000394986 EPHX2P34913 555 aa24.64■■□□□ 1.54
SNCA-203ENST00000394986 RSBN1LQ6PCB5 846 aaPredicted RBP24.64■■□□□ 1.54
SNCA-203ENST00000394986 FBXO33Q7Z6M2 555 aa24.64■■□□□ 1.54
SNCA-203ENST00000394986 VPS37DQ86XT2 251 aa24.64■■□□□ 1.54
SNCA-203ENST00000394986 C16orf71Q8IYS4 520 aaPredicted RBP24.64■■□□□ 1.54
SNCA-203ENST00000394986 TIMM10P62072 90 aa24.63■■□□□ 1.53
SNCA-203ENST00000394986 CAVIN4Q5BKX8 364 aa24.63■■□□□ 1.53
SNCA-203ENST00000394986 TTLL5Q6EMB2 1281 aa24.63■■□□□ 1.53
SNCA-203ENST00000394986 ZNF609O15014 1411 aa24.63■■□□□ 1.53
SNCA-203ENST00000394986 A0A1B0GUL7 405 aa24.62■■□□□ 1.53
SNCA-203ENST00000394986 HMMRO75330 724 aa24.62■■□□□ 1.53
SNCA-203ENST00000394986 EAPPQ56P03 285 aaPredicted RBP24.62■■□□□ 1.53
SNCA-203ENST00000394986 STRIP1Q5VSL9 837 aa24.62■■□□□ 1.53
SNCA-203ENST00000394986 MICALL2Q8IY33 904 aa24.62■■□□□ 1.53
SNCA-203ENST00000394986 TDRD7Q8NHU6 1098 aaKnown RBP24.62■■□□□ 1.53
SNCA-203ENST00000394986 CNOT7Q9UIV1 285 aaKnown RBP24.61■■□□□ 1.53
SNCA-203ENST00000394986 PCDHB15Q9Y5E8 787 aa24.61■■□□□ 1.53
SNCA-203ENST00000394986 RPS12P25398 132 aaKnown RBP24.61■■□□□ 1.53
SNCA-203ENST00000394986 IRX6P78412 446 aaPredicted RBP24.61■■□□□ 1.53
SNCA-203ENST00000394986 GMLQ99445 158 aa24.61■■□□□ 1.53
SNCA-203ENST00000394986 AKAP2Q9Y2D5 859 aa24.61■■□□□ 1.53
SNCA-203ENST00000394986 ZNF646O15015 1829 aaPredicted RBP24.6■■□□□ 1.53
SNCA-203ENST00000394986 SCN4AP35499 1836 aa24.6■■□□□ 1.53
SNCA-203ENST00000394986 PSME4Q14997 1843 aa24.6■■□□□ 1.53
SNCA-203ENST00000394986 APBB1O00213 710 aa24.6■■□□□ 1.53
SNCA-203ENST00000394986 EXOC6Q8TAG9 804 aa24.6■■□□□ 1.53
SNCA-203ENST00000394986 DPF2Q92785 391 aa24.6■■□□□ 1.53
SNCA-203ENST00000394986 NEUROD6Q96NK8 337 aa24.6■■□□□ 1.53
SNCA-203ENST00000394986 TOMM70O94826 608 aa24.59■■□□□ 1.53
SNCA-203ENST00000394986 PHKA1P46020 1223 aa24.59■■□□□ 1.53
SNCA-203ENST00000394986 CHAF1AQ13111 956 aaPredicted RBP24.59■■□□□ 1.53
SNCA-203ENST00000394986 CERS5Q8N5B7 392 aa24.59■■□□□ 1.53
SNCA-203ENST00000394986 AGBL3Q8NEM8 1001 aa24.59■■□□□ 1.53
SNCA-203ENST00000394986 XAGE2Q96GT9 111 aa24.59■■□□□ 1.53
SNCA-203ENST00000394986 FRAT2O75474 233 aaPredicted RBP24.58■■□□□ 1.53
SNCA-203ENST00000394986 EGFRP00533 1210 aa24.58■■□□□ 1.53
SNCA-203ENST00000394986 TRPM4Q8TD43 1214 aa24.58■■□□□ 1.53
SNCA-203ENST00000394986 ADARB2Q9NS39 739 aaKnown RBP24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms