RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 LRRC4BQ9NT99 713 aa16.59■□□□□ 0.25
TNFSF13-203ENST00000380535 MCM4P33991 863 aa16.58■□□□□ 0.25
TNFSF13-203ENST00000380535 ZSCAN25Q6NSZ9 544 aa16.58■□□□□ 0.25
TNFSF13-203ENST00000380535 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.25
TNFSF13-203ENST00000380535 CIZ1Q9ULV3 898 aaPredicted RBP16.58■□□□□ 0.25
TNFSF13-203ENST00000380535 FGFR2P21802 821 aa16.58■□□□□ 0.24
TNFSF13-203ENST00000380535 KCNB2Q92953 911 aa16.58■□□□□ 0.24
TNFSF13-203ENST00000380535 BSDC1Q9NW68 430 aaPredicted RBP16.58■□□□□ 0.24
TNFSF13-203ENST00000380535 SRP68Q9UHB9 627 aaKnown RBP16.58■□□□□ 0.24
TNFSF13-203ENST00000380535 TXNRD1Q16881 649 aa16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 MCMDC2Q4G0Z9 681 aa16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 HMG20BQ9P0W2 317 aa16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 MYH7P12883 1935 aa16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 HSP90AA1P07900 732 aaKnown RBP16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 ZKSCAN1P17029 563 aaPredicted RBP16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 ARID4AP29374 1257 aaPredicted RBP16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 BICDL1Q6ZP65 573 aa16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 MAP4K1Q92918 833 aa16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 A0A1B0GUL6 1792 aa16.57■□□□□ 0.24
TNFSF13-203ENST00000380535 GOLIM4O00461 696 aa16.56■□□□□ 0.24
TNFSF13-203ENST00000380535 ZNF592Q92610 1267 aa16.56■□□□□ 0.24
TNFSF13-203ENST00000380535 TM6SF1Q9BZW5 370 aa16.56■□□□□ 0.24
TNFSF13-203ENST00000380535 FBXO41Q8TF61 875 aa16.55■□□□□ 0.24
TNFSF13-203ENST00000380535 PALD1Q9ULE6 856 aa16.55■□□□□ 0.24
TNFSF13-203ENST00000380535 NPHP1O15259 732 aa16.55■□□□□ 0.24
TNFSF13-203ENST00000380535 RNF113AO15541 343 aaKnown RBP16.55■□□□□ 0.24
TNFSF13-203ENST00000380535 FAM227BQ96M60 508 aa16.55■□□□□ 0.24
TNFSF13-203ENST00000380535 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
TNFSF13-203ENST00000380535 A0A0D9SFI3 127 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 PHF14O94880 888 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 ADORA1P30542 326 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 KCNJ4P48050 445 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 UBE4AQ14139 1066 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 DDX46Q7L014 1031 aaKnown RBP16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 ANKRD2Q9GZV1 360 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 TNS1Q9HBL0 1735 aaKnown RBP16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 AKAP11Q9UKA4 1901 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 ZBTB22O15209 634 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 PSMA5P28066 241 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 ZMYM1Q5SVZ6 1142 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 CNBD1Q8NA66 436 aa16.54■□□□□ 0.24
TNFSF13-203ENST00000380535 NEK4P51957 841 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 ST5P78524 1137 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 CHRNDQ07001 517 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 KRT32Q14532 448 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 NFIXQ14938 502 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 NECTIN1Q15223 517 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 L1TD1Q5T7N2 865 aaKnown RBP16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 TSGA10IPQ3SY00 556 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 GNL3LQ9NVN8 582 aaKnown RBP16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
TNFSF13-203ENST00000380535 TAF5LO75529 589 aa16.52■□□□□ 0.24
TNFSF13-203ENST00000380535 APBA3O96018 575 aa16.52■□□□□ 0.24
TNFSF13-203ENST00000380535 RPS8P62241 208 aaKnown RBP16.52■□□□□ 0.24
TNFSF13-203ENST00000380535 FKBP4Q02790 459 aaKnown RBP eCLIP16.52■□□□□ 0.24
TNFSF13-203ENST00000380535 DSCC1Q9BVC3 393 aa16.52■□□□□ 0.24
TNFSF13-203ENST00000380535 CWC22Q9HCG8 908 aaKnown RBP16.52■□□□□ 0.24
TNFSF13-203ENST00000380535 PRDM10Q9NQV6 1147 aa16.52■□□□□ 0.24
TNFSF13-203ENST00000380535 RBM8AQ9Y5S9 174 aaKnown RBP16.52■□□□□ 0.24
TNFSF13-203ENST00000380535 GYS1P13807 737 aa16.51■□□□□ 0.23
TNFSF13-203ENST00000380535 RAB3GAP1Q15042 981 aa16.51■□□□□ 0.23
TNFSF13-203ENST00000380535 GRIPAP1Q4V328 841 aa16.51■□□□□ 0.23
TNFSF13-203ENST00000380535 EDC3Q96F86 508 aaKnown RBP16.51■□□□□ 0.23
TNFSF13-203ENST00000380535 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
TNFSF13-203ENST00000380535 PTH1RQ03431 593 aa16.51■□□□□ 0.23
TNFSF13-203ENST00000380535 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 DDX11L8A8MPP1 907 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 TM4SF1P30408 202 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 TMED8Q6PL24 325 aaPredicted RBP16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 SEMA3EO15041 775 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 MCAMP43121 646 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 AMIGO3Q86WK7 504 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 NLGN1Q8N2Q7 840 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 APPBP2Q92624 585 aa16.5■□□□□ 0.23
TNFSF13-203ENST00000380535 ZAP70P43403 619 aa16.49■□□□□ 0.23
TNFSF13-203ENST00000380535 UBE3CQ15386 1083 aa16.49■□□□□ 0.23
TNFSF13-203ENST00000380535 CAVIN4Q5BKX8 364 aa16.49■□□□□ 0.23
TNFSF13-203ENST00000380535 AKT1S1Q96B36 256 aa16.49■□□□□ 0.23
TNFSF13-203ENST00000380535 TRAK2O60296 914 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 PROM2Q8N271 834 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 CTNNA3Q9UI47 895 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 MINPP1Q9UNW1 487 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 CYP46A1Q9Y6A2 500 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 TNRC6CQ9HCJ0 1690 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 PDS5AQ29RF7 1337 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 PHKA1P46020 1223 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 VPS53Q5VIR6 699 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 TMC4Q7Z404 712 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 SPATA5Q8NB90 893 aa16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 HELBQ8NG08 1087 aaPredicted RBP16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 INTS4Q96HW7 963 aaKnown RBP16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 ALDH8A1Q9H2A2 487 aaPredicted RBP16.48■□□□□ 0.23
TNFSF13-203ENST00000380535 ZSWIM6Q9HCJ5 1215 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms