RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ZNF396Q96N95 335 aaPredicted RBP17.08■□□□□ 0.33
MSH5-201ENST00000375703 ZBTB3Q9H5J0 574 aa17.08■□□□□ 0.33
MSH5-201ENST00000375703 CTAGE5O15320 804 aa17.08■□□□□ 0.32
MSH5-201ENST00000375703 PDIA3P30101 505 aaKnown RBP17.08■□□□□ 0.32
MSH5-201ENST00000375703 FTOQ9C0B1 505 aaKnown RBP eCLIP17.08■□□□□ 0.32
MSH5-201ENST00000375703 PPFIA3O75145 1194 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 ATL3Q6DD88 541 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 ARID3AQ99856 593 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 MAST3O60307 1309 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 ABCC6O95255 1503 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 GOLGA6L19H0YKK7 550 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 CHMP4CQ96CF2 233 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 COL18A1P39060 1754 aa17.07■□□□□ 0.32
MSH5-201ENST00000375703 GUCY1B3Q02153 619 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 FKBP4Q02790 459 aaKnown RBP eCLIP17.06■□□□□ 0.32
MSH5-201ENST00000375703 LRMPQ12912 555 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 CCDC73Q6ZRK6 1079 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 PUS3Q9BZE2 481 aaKnown RBP17.06■□□□□ 0.32
MSH5-201ENST00000375703 ATG3Q9NT62 314 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 CEP126Q9P2H0 1117 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 CIAO1O76071 339 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 ZNF710Q8N1W2 664 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 TMEM94Q12767 1356 aa17.06■□□□□ 0.32
MSH5-201ENST00000375703 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 M0R2C6 588 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 IQCB1Q15051 598 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 ZSCAN25Q6NSZ9 544 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
MSH5-201ENST00000375703 GOLPH3LQ9H4A5 285 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 SNW1Q13573 536 aaKnown RBP17.05■□□□□ 0.32
MSH5-201ENST00000375703 OSBP2Q969R2 916 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 SALL1Q9NSC2 1324 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
MSH5-201ENST00000375703 KINO60870 393 aaKnown RBP17.05■□□□□ 0.32
MSH5-201ENST00000375703 STX1AQ16623 288 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 GORABQ5T7V8 394 aa17.05■□□□□ 0.32
MSH5-201ENST00000375703 ERVV-2B6SEH9 535 aa17.04■□□□□ 0.32
MSH5-201ENST00000375703 ME1P48163 572 aa17.04■□□□□ 0.32
MSH5-201ENST00000375703 LRRFIP1Q32MZ4 808 aaKnown RBP17.04■□□□□ 0.32
MSH5-201ENST00000375703 CCDC158Q5M9N0 1113 aa17.04■□□□□ 0.32
MSH5-201ENST00000375703 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
MSH5-201ENST00000375703 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.04■□□□□ 0.32
MSH5-201ENST00000375703 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
MSH5-201ENST00000375703 CCDC57Q2TAC2 916 aa17.04■□□□□ 0.32
MSH5-201ENST00000375703 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
MSH5-201ENST00000375703 CDC25BP30305 580 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 FAM160A1Q05DH4 1040 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 WASHC4Q2M389 1173 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 TTC39AQ5SRH9 613 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 ENGASEQ8NFI3 743 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 BCL2L12Q9HB09 334 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 SPATA31A3Q5VYP0 1347 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 PCDH11XQ9BZA7 1347 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 PCDH11YQ9BZA8 1340 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 BECN2A8MW95 431 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 ILDR1Q86SU0 546 aaPredicted RBP17.03■□□□□ 0.32
MSH5-201ENST00000375703 FSIP1Q8NA03 581 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 TNS3Q68CZ2 1445 aa17.03■□□□□ 0.32
MSH5-201ENST00000375703 ADAMTSL3P82987 1691 aa17.02■□□□□ 0.32
MSH5-201ENST00000375703 FDPSP14324 419 aaKnown RBP17.02■□□□□ 0.32
MSH5-201ENST00000375703 SARM1Q6SZW1 724 aa17.02■□□□□ 0.32
MSH5-201ENST00000375703 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
MSH5-201ENST00000375703 FBXL16Q8N461 479 aa17.02■□□□□ 0.32
MSH5-201ENST00000375703 CACTINQ8WUQ7 758 aaKnown RBP17.02■□□□□ 0.32
MSH5-201ENST00000375703 CCDC94Q9BW85 323 aaPredicted RBP17.02■□□□□ 0.32
MSH5-201ENST00000375703 AKAP2Q9Y2D5 859 aa17.02■□□□□ 0.32
MSH5-201ENST00000375703 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.31
MSH5-201ENST00000375703 GPHNQ9NQX3 736 aaPredicted RBP17.02■□□□□ 0.31
MSH5-201ENST00000375703 CARMIL3Q8ND23 1372 aa17.02■□□□□ 0.31
MSH5-201ENST00000375703 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 EVCP57679 992 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 HAND2P61296 217 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 CCDC144BQ3MJ40 725 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 CADPS2Q86UW7 1296 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 CCDC144CPQ8IYA2 1237 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 XAGE2Q96GT9 111 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 ANO10Q9NW15 660 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 CPDO75976 1380 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 LAMA4Q16363 1823 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
MSH5-201ENST00000375703 FGAP02671 866 aa17■□□□□ 0.31
MSH5-201ENST00000375703 ZFYP08048 801 aaPredicted RBP17■□□□□ 0.31
MSH5-201ENST00000375703 ADORA1P30542 326 aa17■□□□□ 0.31
MSH5-201ENST00000375703 MRFAP1L1Q96HT8 127 aa17■□□□□ 0.31
MSH5-201ENST00000375703 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
MSH5-201ENST00000375703 RTEL1Q9NZ71 1219 aa17■□□□□ 0.31
MSH5-201ENST00000375703 GLI3P10071 1580 aa17■□□□□ 0.31
MSH5-201ENST00000375703 ISCA1Q9BUE6 129 aa17■□□□□ 0.31
MSH5-201ENST00000375703 LAMB4A4D0S4 1761 aa17■□□□□ 0.31
MSH5-201ENST00000375703 A0A0U1RQG5 324 aaPredicted RBP16.99■□□□□ 0.31
MSH5-201ENST00000375703 TCIRG1Q13488 830 aa16.99■□□□□ 0.31
MSH5-201ENST00000375703 ADALQ6DHV7 355 aa16.99■□□□□ 0.31
MSH5-201ENST00000375703 OTUD7BQ6GQQ9 843 aa16.99■□□□□ 0.31
MSH5-201ENST00000375703 SDF4Q9BRK5 362 aa16.99■□□□□ 0.31
MSH5-201ENST00000375703 A0A087WWV3 80 aa16.99■□□□□ 0.31
MSH5-201ENST00000375703 DHX16O60231 1041 aaKnown RBP16.99■□□□□ 0.31
MSH5-201ENST00000375703 TNNT1P13805 278 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms