RNA–Protein interactions for RNA: ENST00000373839.7

PHACTR4-202, Transcript of phosphatase and actin regulator 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHACTR4, Length 6,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-202ENST00000373839 SSFA2P28290 1259 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 SLC39A6Q13433 755 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 TNPO1Q92973 898 aaKnown RBP12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 MRPL50Q8N5N7 158 aaKnown RBP12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 LMBR1Q8WVP7 490 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 TFIP11Q9UBB9 837 aaKnown RBP12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 BICDL2A1A5D9 508 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 BRDTQ58F21 947 aaPredicted RBP12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 ESYT1Q9BSJ8 1104 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 TBC1D2Q9BYX2 928 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 F8W031 263 aaPredicted RBP12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
PHACTR4-202ENST00000373839 TCHPQ9BT92 498 aa12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 CCDC175P0C221 793 aa12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 SUPT20HQ8NEM7 779 aa12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 LMAN1P49257 510 aa12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 CNBD1Q8NA66 436 aa12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 PLCD4Q9BRC7 762 aa12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 PEG3Q9GZU2 1588 aa12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 ASIC1P78348 528 aa12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 CGNQ9P2M7 1197 aaKnown RBP12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 PRPF4BQ13523 1007 aaKnown RBP12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 DDX21Q9NR30 783 aaKnown RBP eCLIP12.62□□□□□ -0.39
PHACTR4-202ENST00000373839 CCDC171Q6TFL3 1326 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 YTHDC2Q9H6S0 1430 aaKnown RBP12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 BIN1O00499 593 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 SDSP20132 328 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 SELENOOQ9BVL4 669 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 POLKQ9UBT6 870 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 RASAL2Q9UJF2 1139 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 STK24Q9Y6E0 443 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 DKC1O60832 514 aaKnown RBP eCLIP12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 MTHFSDQ2M296 383 aaKnown RBP12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 SPECC1LQ69YQ0 1117 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 FAM13AO94988 1023 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 KLHL40Q2TBA0 621 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 ABCC1P33527 1531 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 BRAPQ7Z569 592 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 NFATC2IPQ8NCF5 419 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 BICRAQ9NZM4 1560 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 TNNT1P13805 278 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 ATL3Q6DD88 541 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 CCDC77Q9BR77 488 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 CEP83Q9Y592 693 aa12.61□□□□□ -0.39
PHACTR4-202ENST00000373839 ATP2A1O14983 1001 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 KRT2P35908 639 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 TMX3Q96JJ7 454 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 TBC1D32Q96NH3 1257 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 BRPF3Q9ULD4 1205 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 RNMTO43148 476 aaKnown RBP12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 PANK2Q9BZ23 570 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 SH3TC1Q8TE82 1336 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 TRMT1LQ7Z2T5 733 aaKnown RBP12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 CCDC155Q8N6L0 562 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 USP25Q9UHP3 1055 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 UHRF1BP1Q6BDS2 1440 aa12.6□□□□□ -0.39
PHACTR4-202ENST00000373839 ARHGEF10O15013 1369 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 PRAG1Q86YV5 1406 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 GNPATO15228 680 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 RPL13P26373 211 aaKnown RBP12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 DNA2P51530 1060 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 LRSAM1Q6UWE0 723 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 KIAA1524Q8TCG1 905 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 HELLSQ9NRZ9 838 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 IQSEC3Q9UPP2 1182 aaPredicted RBP12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 SNW1Q13573 536 aaKnown RBP12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 Q6ZUG5 572 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 CEP112Q8N8E3 955 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 SYCP2Q9BX26 1530 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 TUBB4BP68371 445 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 CCDC117Q8IWD4 279 aaPredicted RBP12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 JARID2Q92833 1246 aaPredicted RBP12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
PHACTR4-202ENST00000373839 PLS1Q14651 629 aa12.58□□□□□ -0.39
PHACTR4-202ENST00000373839 ARHGEF10LQ9HCE6 1279 aa12.58□□□□□ -0.39
PHACTR4-202ENST00000373839 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.39
PHACTR4-202ENST00000373839 ZMYM3Q14202 1370 aa12.58□□□□□ -0.39
PHACTR4-202ENST00000373839 BIVM-ERCC5R4GMW8 1640 aa12.58□□□□□ -0.39
PHACTR4-202ENST00000373839 HOXC9P31274 260 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 KRT83P78385 493 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 C6orf163Q5TEZ5 329 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 PLBD2Q8NHP8 589 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 UBASH3AP57075 661 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 TMOD4Q9NZQ9 345 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 TACC1O75410 805 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 PARP1P09874 1014 aaKnown RBP12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 KCNA6P17658 529 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 RBM10P98175 930 aaKnown RBP12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 DHX32Q7L7V1 743 aaKnown RBP12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 STMN4Q9H169 189 aaPredicted RBP12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 PICK1Q9NRD5 415 aa12.58□□□□□ -0.4
PHACTR4-202ENST00000373839 NMIQ13287 307 aaPredicted RBP12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 UGGT2Q9NYU1 1516 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 SHANK2Q9UPX8 1470 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 SPTLC2O15270 562 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 CA8P35219 290 aa12.57□□□□□ -0.4
PHACTR4-202ENST00000373839 SLC4A8Q2Y0W8 1093 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms