RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 CABP4P57796 275 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 DUOXA2Q1HG44 320 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 C8orf34Q49A92 452 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 SLC51AQ86UW1 340 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 TTC16Q8NEE8 873 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 UBASH3BQ8TF42 649 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 UTP4Q969X6 686 aaKnown RBP5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 UBL7Q96S82 380 aaPredicted RBP5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 POP1Q99575 1024 aaKnown RBP5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 SEC31BQ9NQW1 1179 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 PCMTD2Q9NV79 361 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 CNTN3Q9P232 1028 aa5.08□□□□□ -1.6
RNU4-42P-201ENST00000364738 A6NHS1 94 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 H3BRJ5 948 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 GSC2O15499 205 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 DDX3YO15523 660 aaKnown RBP5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 ACPPP15309 386 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 MPSTP25325 297 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 SSTR4P31391 388 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 UVSSAQ2YD98 709 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 NOM1Q5C9Z4 860 aaKnown RBP5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 KIAA1211Q6ZU35 1233 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 FOXD4L4Q8WXT5 416 aaPredicted RBP5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 STOML1Q9UBI4 398 aa5.07□□□□□ -1.6
RNU4-42P-201ENST00000364738 TM4SF5O14894 197 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 ADAM11O75078 769 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 IGLV1-40P01703 118 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 PDGFAP04085 211 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 MZF1P28698 734 aaPredicted RBP5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 EIF1AXP47813 144 aaKnown RBP5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 PIP4K2BP78356 416 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 ARMC10Q8N2F6 343 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 C1orf127Q8N9H9 656 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 GTF3C2Q8WUA4 911 aaPredicted RBP5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 KLHDC7BQ96G42 594 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 ADAM19Q9H013 955 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 SALL4Q9UJQ4 1053 aa5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.06□□□□□ -1.6
RNU4-42P-201ENST00000364738 PDE2AO00408 941 aaPredicted RBP5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 CD97P48960 835 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 NLRP12P59046 1061 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 MTMR3Q13615 1198 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 XKR5Q6UX68 686 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 SLC7A3Q8WY07 619 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 WNT8BQ93098 351 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 FAM46AQ96IP4 442 aaKnown RBP5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 HHIPQ96QV1 700 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 KRTAP9-2Q9BYQ4 174 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 GGNBP2Q9H3C7 697 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 DZANK1Q9NVP4 752 aa5.05□□□□□ -1.6
RNU4-42P-201ENST00000364738 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 SART1O43290 800 aaKnown RBP5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 TRPA1O75762 1119 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 TGFB1P01137 390 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 NFIAQ12857 509 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 AAMPQ13685 434 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 ANKRD34AQ69YU3 496 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 ALKBH2Q6NS38 261 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 CCDC82Q8N4S0 544 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 MYRFLQ96LU7 910 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 CHRDQ9H2X0 955 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 C7orf69Q9H7B7 122 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 OSGEPQ9NPF4 335 aa5.04□□□□□ -1.6
RNU4-42P-201ENST00000364738 HMX2A2RU54 273 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 NFKBIEO00221 500 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 PHACTR2O75167 634 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 ARL4DP49703 201 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 FDX2Q6P4F2 183 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 TRIM42Q8IWZ5 723 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 SNX29Q8TEQ0 813 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 PMEPA1Q969W9 287 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 RUSC1Q9BVN2 902 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 RNF208Q9H0X6 261 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 SOX13Q9UN79 622 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 POLIQ9UNA4 740 aa5.03□□□□□ -1.6
RNU4-42P-201ENST00000364738 KRTAP9-6A0A140TA67 174 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 TMEM88BA6NKF7 163 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 EREGO14944 169 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 GAS2O43903 313 aaKnown RBP5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 COBLO75128 1261 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 EDN3P14138 238 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 SSFA2P28290 1259 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 PREPP48147 710 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 RNF43Q68DV7 783 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 ZDHHC13Q8IUH4 622 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 FAM20CQ8IXL6 584 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 TMEM102Q8N9M5 508 aaPredicted RBP5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 OSMRQ99650 979 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 DBNDD2Q9BQY9 259 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 ZKSCAN3Q9BRR0 538 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 KCNF1Q9H3M0 494 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 MTMR7Q9Y216 660 aa5.02□□□□□ -1.61
RNU4-42P-201ENST00000364738 TNFRSF21O75509 655 aa5.01□□□□□ -1.61
RNU4-42P-201ENST00000364738 PPP1R15AO75807 674 aaPredicted RBP5.01□□□□□ -1.61
RNU4-42P-201ENST00000364738 BMP3P12645 472 aa5.01□□□□□ -1.61
RNU4-42P-201ENST00000364738 C19orf57Q0VDD7 668 aa5.01□□□□□ -1.61
RNU4-42P-201ENST00000364738 IKBKEQ14164 716 aa5.01□□□□□ -1.61
RNU4-42P-201ENST00000364738 HGSNATQ68CP4 663 aa5.01□□□□□ -1.61
RNU4-42P-201ENST00000364738 MCTP1Q6DN14 999 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms