RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 KANSL3Q9P2N6 904 aa9.74□□□□□ -0.85
RNU4-40P-201ENST00000364351 TM4SF5O14894 197 aa9.73□□□□□ -0.85
RNU4-40P-201ENST00000364351 ATP2B4P23634 1241 aa9.73□□□□□ -0.85
RNU4-40P-201ENST00000364351 CD97P48960 835 aa9.73□□□□□ -0.85
RNU4-40P-201ENST00000364351 PDE12Q6L8Q7 609 aaKnown RBP9.73□□□□□ -0.85
RNU4-40P-201ENST00000364351 KIAA1211Q6ZU35 1233 aa9.73□□□□□ -0.85
RNU4-40P-201ENST00000364351 UTP4Q969X6 686 aaKnown RBP9.73□□□□□ -0.85
RNU4-40P-201ENST00000364351 KLHDC7BQ96G42 594 aa9.73□□□□□ -0.85
RNU4-40P-201ENST00000364351 CNTN3Q9P232 1028 aa9.73□□□□□ -0.85
RNU4-40P-201ENST00000364351 TGFB1P01137 390 aa9.72□□□□□ -0.85
RNU4-40P-201ENST00000364351 SEC31BQ9NQW1 1179 aa9.72□□□□□ -0.85
RNU4-40P-201ENST00000364351 MED26O95402 600 aa9.71□□□□□ -0.86
RNU4-40P-201ENST00000364351 UBASH3BQ8TF42 649 aa9.71□□□□□ -0.86
RNU4-40P-201ENST00000364351 FOXD4L4Q8WXT5 416 aaPredicted RBP9.71□□□□□ -0.86
RNU4-40P-201ENST00000364351 PBXIP1Q96AQ6 731 aa9.71□□□□□ -0.86
RNU4-40P-201ENST00000364351 ADAM19Q9H013 955 aa9.71□□□□□ -0.86
RNU4-40P-201ENST00000364351 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.71□□□□□ -0.86
RNU4-40P-201ENST00000364351 ADAM11O75078 769 aa9.7□□□□□ -0.86
RNU4-40P-201ENST00000364351 COBLO75128 1261 aa9.7□□□□□ -0.86
RNU4-40P-201ENST00000364351 CABP4P57796 275 aa9.7□□□□□ -0.86
RNU4-40P-201ENST00000364351 KRTAP1-3Q8IUG1 177 aa9.7□□□□□ -0.86
RNU4-40P-201ENST00000364351 TRIM42Q8IWZ5 723 aa9.7□□□□□ -0.86
RNU4-40P-201ENST00000364351 EDEM1Q92611 657 aa9.7□□□□□ -0.86
RNU4-40P-201ENST00000364351 FAM46AQ96IP4 442 aaKnown RBP9.7□□□□□ -0.86
RNU4-40P-201ENST00000364351 HMX2A2RU54 273 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 ACPPP15309 386 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 CES1P23141 567 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 DNM1Q05193 864 aaKnown RBP9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 NFIAQ12857 509 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 UVSSAQ2YD98 709 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 MCTP1Q6DN14 999 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 C1orf127Q8N9H9 656 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 KRTAP4-12Q9BQ66 201 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 C7orf69Q9H7B7 122 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 SALL4Q9UJQ4 1053 aa9.69□□□□□ -0.86
RNU4-40P-201ENST00000364351 H3BRJ5 948 aa9.68□□□□□ -0.86
RNU4-40P-201ENST00000364351 SART1O43290 800 aaKnown RBP9.68□□□□□ -0.86
RNU4-40P-201ENST00000364351 RPLP1P05386 114 aaKnown RBP9.68□□□□□ -0.86
RNU4-40P-201ENST00000364351 C8orf34Q49A92 452 aa9.68□□□□□ -0.86
RNU4-40P-201ENST00000364351 TTC16Q8NEE8 873 aa9.68□□□□□ -0.86
RNU4-40P-201ENST00000364351 CCDC97Q96F63 343 aaPredicted RBP9.68□□□□□ -0.86
RNU4-40P-201ENST00000364351 MYRFLQ96LU7 910 aa9.68□□□□□ -0.86
RNU4-40P-201ENST00000364351 A6NHS1 94 aa9.67□□□□□ -0.86
RNU4-40P-201ENST00000364351 TRPA1O75762 1119 aa9.67□□□□□ -0.86
RNU4-40P-201ENST00000364351 PCSK2P16519 638 aa9.67□□□□□ -0.86
RNU4-40P-201ENST00000364351 ZDHHC13Q8IUH4 622 aa9.67□□□□□ -0.86
RNU4-40P-201ENST00000364351 SLC7A3Q8WY07 619 aa9.67□□□□□ -0.86
RNU4-40P-201ENST00000364351 ZMYND15Q9H091 742 aa9.67□□□□□ -0.86
RNU4-40P-201ENST00000364351 GGNBP2Q9H3C7 697 aa9.67□□□□□ -0.86
RNU4-40P-201ENST00000364351 NLRP12P59046 1061 aa9.66□□□□□ -0.86
RNU4-40P-201ENST00000364351 PIP4K2BP78356 416 aa9.66□□□□□ -0.86
RNU4-40P-201ENST00000364351 RNF43Q68DV7 783 aa9.66□□□□□ -0.86
RNU4-40P-201ENST00000364351 KCNF1Q9H3M0 494 aa9.66□□□□□ -0.86
RNU4-40P-201ENST00000364351 DZANK1Q9NVP4 752 aa9.66□□□□□ -0.86
RNU4-40P-201ENST00000364351 NFKBIEO00221 500 aa9.65□□□□□ -0.86
RNU4-40P-201ENST00000364351 PDE2AO00408 941 aaPredicted RBP9.65□□□□□ -0.86
RNU4-40P-201ENST00000364351 NOM1Q5C9Z4 860 aaKnown RBP9.65□□□□□ -0.86
RNU4-40P-201ENST00000364351 LCE3BQ5TA77 95 aa9.65□□□□□ -0.86
RNU4-40P-201ENST00000364351 XKR5Q6UX68 686 aa9.65□□□□□ -0.86
RNU4-40P-201ENST00000364351 HELQQ8TDG4 1101 aa9.65□□□□□ -0.86
RNU4-40P-201ENST00000364351 WNT8BQ93098 351 aa9.65□□□□□ -0.86
RNU4-40P-201ENST00000364351 OSGEPQ9NPF4 335 aa9.65□□□□□ -0.86
RNU4-40P-201ENST00000364351 KIAA1324LA8MWY0 1029 aaPredicted RBP9.64□□□□□ -0.87
RNU4-40P-201ENST00000364351 PDGFAP04085 211 aa9.64□□□□□ -0.87
RNU4-40P-201ENST00000364351 BMP3P12645 472 aa9.64□□□□□ -0.87
RNU4-40P-201ENST00000364351 CLEC10AQ8IUN9 316 aa9.64□□□□□ -0.87
RNU4-40P-201ENST00000364351 FAM20CQ8IXL6 584 aa9.64□□□□□ -0.87
RNU4-40P-201ENST00000364351 HHIPQ96QV1 700 aa9.64□□□□□ -0.87
RNU4-40P-201ENST00000364351 DBNDD2Q9BQY9 259 aa9.64□□□□□ -0.87
RNU4-40P-201ENST00000364351 GRIK1P39086 918 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 PREPP48147 710 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 IRAK1P51617 712 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 ANKRD34AQ69YU3 496 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 BEND4Q6ZU67 534 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 FAM83CQ9BQN1 747 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 RUSC1Q9BVN2 902 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 RNF208Q9H0X6 261 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 SERPINA10Q9UK55 444 aa9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 COL17A1Q9UMD9 1497 aaPredicted RBP9.63□□□□□ -0.87
RNU4-40P-201ENST00000364351 MZF1P28698 734 aaPredicted RBP9.62□□□□□ -0.87
RNU4-40P-201ENST00000364351 ARL4DP49703 201 aa9.62□□□□□ -0.87
RNU4-40P-201ENST00000364351 GP2P55259 537 aaKnown RBP9.62□□□□□ -0.87
RNU4-40P-201ENST00000364351 HGSNATQ68CP4 663 aa9.62□□□□□ -0.87
RNU4-40P-201ENST00000364351 INTS5Q6P9B9 1019 aaKnown RBP9.62□□□□□ -0.87
RNU4-40P-201ENST00000364351 PMEPA1Q969W9 287 aa9.62□□□□□ -0.87
RNU4-40P-201ENST00000364351 OAS3Q9Y6K5 1087 aaKnown RBP9.62□□□□□ -0.87
RNU4-40P-201ENST00000364351 PRR19A6NJB7 356 aa9.61□□□□□ -0.87
RNU4-40P-201ENST00000364351 MPSTP25325 297 aa9.61□□□□□ -0.87
RNU4-40P-201ENST00000364351 EIF1AXP47813 144 aaKnown RBP9.61□□□□□ -0.87
RNU4-40P-201ENST00000364351 FDX2Q6P4F2 183 aa9.61□□□□□ -0.87
RNU4-40P-201ENST00000364351 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.61□□□□□ -0.87
RNU4-40P-201ENST00000364351 SHKBP1Q8TBC3 707 aa9.61□□□□□ -0.87
RNU4-40P-201ENST00000364351 CHRDQ9H2X0 955 aa9.61□□□□□ -0.87
RNU4-40P-201ENST00000364351 SOX13Q9UN79 622 aa9.61□□□□□ -0.87
RNU4-40P-201ENST00000364351 PAX4O43316 350 aa9.6□□□□□ -0.87
RNU4-40P-201ENST00000364351 C19orf57Q0VDD7 668 aa9.6□□□□□ -0.87
RNU4-40P-201ENST00000364351 GTF3C2Q8WUA4 911 aaPredicted RBP9.6□□□□□ -0.87
RNU4-40P-201ENST00000364351 OSMRQ99650 979 aa9.6□□□□□ -0.87
RNU4-40P-201ENST00000364351 GAS2O43903 313 aaKnown RBP9.59□□□□□ -0.87
RNU4-40P-201ENST00000364351 AAMPQ13685 434 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms