RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 LAMB3Q13751 1172 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 CC2D1AQ6P1N0 951 aaPredicted RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 CPLX4Q7Z7G2 160 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 RASEFQ8IZ41 740 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 SAMM50Q9Y512 469 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 COL17A1Q9UMD9 1497 aaPredicted RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 PDE4DIPQ5VU43 2346 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 BAIAP2L1Q9UHR4 511 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 FHOD1Q9Y613 1164 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 USP27XA6NNY8 438 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 PPP1R12BO60237 982 aaPredicted RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 ATP1A2P50993 1020 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 HLTFQ14527 1009 aaKnown RBP eCLIP7.88□□□□□ -1.157e-8■■■■□ 22.5
NF1-202ENST00000358273 IFIT2P09913 472 aaKnown RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 KLHL10Q6JEL2 608 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 APBB1IPQ7Z5R6 666 aaPredicted RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 ALS2CR12Q96Q35 445 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 NSFL1CQ9UNZ2 370 aaKnown RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 MAP7D1Q3KQU3 841 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 LONRF3Q496Y0 759 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 LRRC8AQ8IWT6 810 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.88□□□□□ -1.152e-8■■■■■ 66.7
NF1-202ENST00000358273 TNNQ9UQP3 1299 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 CUL7Q14999 1698 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 LMOD1P29536 600 aaPredicted RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 PIP4K2AP48426 406 aaPredicted RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 SAMD15Q9P1V8 674 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 EXOC6BQ9Y2D4 811 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 CHUKO15111 745 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 CCDC178Q5BJE1 867 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 IFT74Q96LB3 600 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 NAPGQ99747 312 aaPredicted RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 YIPF3Q9GZM5 350 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 ZNF330Q9Y3S2 320 aaPredicted RBP7.88□□□□□ -1.15
NF1-202ENST00000358273 PCM1Q15154 2024 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 NPHP3Q7Z494 1330 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 TUBBP07437 444 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 DACH1Q9UI36 760 aa7.88□□□□□ -1.15
NF1-202ENST00000358273 CACTINQ8WUQ7 758 aaKnown RBP7.87□□□□□ -1.15
NF1-202ENST00000358273 ZMAT2Q96NC0 199 aaKnown RBP7.87□□□□□ -1.15
NF1-202ENST00000358273 PPFIA1Q13136 1202 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 MAP7Q14244 749 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 LMOD2Q6P5Q4 547 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 OSBPL1AQ9BXW6 950 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 UGGT2Q9NYU1 1516 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 SGSM3Q96HU1 749 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 SIL1Q9H173 461 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 KDM6BO15054 1643 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 UBASH3AP57075 661 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 CEP104O60308 925 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 IFT88Q13099 833 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 STIM1Q13586 685 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 DTNBP1Q96EV8 351 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 SEPT11Q9NVA2 429 aaKnown RBP7.87□□□□□ -1.15
NF1-202ENST00000358273 VCXQ9H320 206 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 REREQ9P2R6 1566 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 KIF20BQ96Q89 1820 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 BRD1O95696 1058 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 CCDC40Q4G0X9 1142 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 CWC27Q6UX04 472 aaKnown RBP7.87□□□□□ -1.15
NF1-202ENST00000358273 SELENOSQ9BQE4 189 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 TFIP11Q9UBB9 837 aaKnown RBP7.87□□□□□ -1.15
NF1-202ENST00000358273 KANK1Q14678 1352 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 CCDC129Q6ZRS4 1044 aa7.87□□□□□ -1.15
NF1-202ENST00000358273 TMA7Q9Y2S6 64 aaKnown RBP7.87□□□□□ -1.15
NF1-202ENST00000358273 LUC7L2Q9Y383 392 aaKnown RBP7.87□□□□□ -1.15
NF1-202ENST00000358273 GUCA1BQ9UMX6 200 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 MARCH6O60337 910 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 VIMP08670 466 aaKnown RBP7.86□□□□□ -1.15
NF1-202ENST00000358273 SDSP20132 328 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 PARD6BQ9BYG5 372 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 UBAP1Q9NZ09 502 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 RWDD2BP57060 319 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 ACRBPQ8NEB7 543 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 WHAMMQ8TF30 809 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 CLTAP09496 248 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 CCDC96Q2M329 555 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 ZNF569Q5MCW4 686 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 BCAS4Q8TDM0 211 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 BAG1Q99933 345 aaPredicted RBP7.86□□□□□ -1.15
NF1-202ENST00000358273 DESI2Q9BSY9 194 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 SPATA31E1Q6ZUB1 1445 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 TPD52L2O43399 206 aaKnown RBP7.86□□□□□ -1.15
NF1-202ENST00000358273 MYO1EQ12965 1108 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 KIAA0825Q8IV33 1275 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 BSDC1Q9NW68 430 aaPredicted RBP7.86□□□□□ -1.15
NF1-202ENST00000358273 IMPACTQ9P2X3 320 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 SPTY2D1Q68D10 685 aaPredicted RBP7.86□□□□□ -1.15
NF1-202ENST00000358273 ABCF2Q9UG63 623 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 SYNMO15061 1565 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 ZFYP08048 801 aaPredicted RBP7.86□□□□□ -1.15
NF1-202ENST00000358273 ABCD1P33897 745 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 FSD1Q9BTV5 496 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 UTP14AQ9BVJ6 771 aaKnown RBP7.86□□□□□ -1.15
NF1-202ENST00000358273 MAGEC2Q9UBF1 373 aaPredicted RBP7.86□□□□□ -1.15
NF1-202ENST00000358273 SLC30A9Q6PML9 568 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 LRRD1A4D1F6 860 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 SIRT1Q96EB6 747 aa7.86□□□□□ -1.15
NF1-202ENST00000358273 KLC4Q9NSK0 619 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms