RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 EXOC4Q96A65 974 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 MAGEF1Q9HAY2 307 aa7.44□□□□□ -1.22
VPS13B-202ENST00000357162 DEUP1Q05D60 604 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 TEX13AQ9BXU3 409 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-202ENST00000357162 SOX12O15370 315 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 TAF7Q15545 349 aaPredicted RBP7.43□□□□□ -1.22
VPS13B-202ENST00000357162 NCOA7Q8NI08 942 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 SPTBN2O15020 2390 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 GOLGA6CA6NDK9 693 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 GOLGA6DP0CG33 693 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 TSNARE1Q96NA8 513 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 GOLGA6AQ9NYA3 693 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 GNAT3A8MTJ3 354 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 DMTNQ08495 405 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 IQUBQ8NA54 791 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 CCDC42Q96M95 316 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 JADE2Q9NQC1 790 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 NKIRAS1Q9NYS0 192 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 F13A1P00488 732 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 RPL13P26373 211 aaKnown RBP7.43□□□□□ -1.22
VPS13B-202ENST00000357162 UBA7P41226 1012 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 MCM6Q14566 821 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 FAM71BQ8TC56 605 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 CROCCQ5TZA2 2017 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 PPP2R3AQ06190 1150 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 CFAP157Q5JU67 520 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 KLHL10Q6JEL2 608 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 TRIML1Q8N9V2 468 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 MLKLQ8NB16 471 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 PPP4R3AQ6IN85 833 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 ZNF365Q70YC5 407 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 PAK2Q13177 524 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 CPLX4Q7Z7G2 160 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 RILPL1Q5EBL4 403 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 Q9H521 79 aa7.43□□□□□ -1.22
VPS13B-202ENST00000357162 RTL9Q8NET4 1388 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 KCNG1Q9UIX4 513 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 TM6SF1Q9BZW5 370 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 NDUFAB1O14561 156 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 RAB3IPQ96QF0 476 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-202ENST00000357162 GVINP1Q7Z2Y8 2422 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 COL17A1Q9UMD9 1497 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-202ENST00000357162 PARP2Q9UGN5 583 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 PRAG1Q86YV5 1406 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 CCDC62Q6P9F0 684 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 SEPT14Q6ZU15 432 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 TMX3Q96JJ7 454 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 CNOT10Q9H9A5 744 aaKnown RBP7.42□□□□□ -1.22
VPS13B-202ENST00000357162 ABCC2Q92887 1545 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 FLOT1O75955 427 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 CDC25BP30305 580 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 NAA16Q6N069 864 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-202ENST00000357162 CLASP1Q7Z460 1538 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 GRIPAP1Q4V328 841 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 GDAP1L1Q96MZ0 367 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 IFIT1P09914 478 aaKnown RBP7.42□□□□□ -1.22
VPS13B-202ENST00000357162 TRPC3Q13507 836 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 ANKRD44Q8N8A2 993 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 SEMA3FQ13275 785 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 PRPF40BQ6NWY9 871 aaKnown RBP7.42□□□□□ -1.22
VPS13B-202ENST00000357162 APLFQ8IW19 511 aaPredicted RBP7.42□□□□□ -1.22
VPS13B-202ENST00000357162 EXOC1Q9NV70 894 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 MTUS1Q9ULD2 1270 aa7.42□□□□□ -1.22
VPS13B-202ENST00000357162 FAM135BQ49AJ0 1406 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 CCHCR1Q8TD31 782 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 DCTPP1Q9H773 170 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 KIF1BO60333 1816 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 PDE4BQ07343 736 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 CCDC96Q2M329 555 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 NAPBQ9H115 298 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 GOLGA6BA6NDN3 693 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 NEK1Q96PY6 1258 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 SPAG5Q96R06 1193 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 A0A1W2PRG0 241 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 AKR1B15C9JRZ8 316 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 MTIF2P46199 727 aaKnown RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 CYP26C1Q6V0L0 522 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 ZHX1Q9UKY1 873 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 ZGPATQ8N5A5 531 aaKnown RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 ABCC5O15440 1437 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 CALCOCO2Q13137 446 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 CAMK4Q16566 473 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 EFCAB13Q8IY85 973 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 CUL5Q93034 780 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 GFM2Q969S9 779 aaKnown RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 ZNF530Q6P9A1 599 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 RAB11FIP4Q86YS3 637 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 IPO4Q8TEX9 1081 aaKnown RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 FBXW7Q969H0 707 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 NAPGQ99747 312 aaPredicted RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 ATRIPQ8WXE1 791 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 DNMT1P26358 1616 aaKnown RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 SSRP1Q08945 709 aaKnown RBP7.41□□□□□ -1.22
VPS13B-202ENST00000357162 AFAP1L2Q8N4X5 818 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 UBL4BQ8N7F7 174 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 NOX5Q96PH1 765 aa7.41□□□□□ -1.22
VPS13B-202ENST00000357162 CEP57Q86XR8 500 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 MYL5Q02045 173 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms