RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 A0A0D9SFI3 127 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 SPDYE4A6NLX3 237 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 CASP1P29466 404 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 HLFQ16534 295 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 SPIRE2Q8WWL2 714 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 ZNF594Q96JF6 807 aaPredicted RBP6.99□□□□□ -1.29
CD47-201ENST00000355354 SIL1Q9H173 461 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 NCOA5Q9HCD5 579 aaKnown RBP6.99□□□□□ -1.29
CD47-201ENST00000355354 PASKQ96RG2 1323 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 FAM186AA6NE01 2351 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 ZC3H4Q9UPT8 1303 aaKnown RBP6.99□□□□□ -1.29
CD47-201ENST00000355354 RP1L1Q8IWN7 2480 aaPredicted RBP6.99□□□□□ -1.29
CD47-201ENST00000355354 PI4KAP2A4QPH2 592 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 EIF2S2P20042 333 aaKnown RBP6.99□□□□□ -1.29
CD47-201ENST00000355354 PI4KAP1Q8N8J0 262 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 TMX3Q96JJ7 454 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 BRWD1Q9NSI6 2320 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 PDE1AP54750 535 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 ZKSCAN2Q63HK3 967 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 IRX2Q9BZI1 471 aaPredicted RBP6.99□□□□□ -1.29
CD47-201ENST00000355354 DCTPP1Q9H773 170 aa6.99□□□□□ -1.29
CD47-201ENST00000355354 ALPK2Q86TB3 2170 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 YY1P25490 414 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 ATP5J2-PTCD1G3V325 749 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 PTCD1O75127 700 aaKnown RBP6.98□□□□□ -1.29
CD47-201ENST00000355354 USP49Q70CQ1 688 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 TTC6Q86TZ1 520 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 FOXP4Q8IVH2 680 aaPredicted RBP6.98□□□□□ -1.29
CD47-201ENST00000355354 HDAC1Q13547 482 aaPredicted RBP6.98□□□□□ -1.29
CD47-201ENST00000355354 NBPF14Q5TI25 921 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 CCDC8Q9H0W5 538 aaPredicted RBP6.98□□□□□ -1.29
CD47-201ENST00000355354 USP25Q9UHP3 1055 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 TIMM10P62072 90 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 ISM2Q6H9L7 571 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 PUS3Q9BZE2 481 aaKnown RBP6.98□□□□□ -1.29
CD47-201ENST00000355354 CHPF2Q9P2E5 772 aa6.98□□□□□ -1.29
CD47-201ENST00000355354 NEK4P51957 841 aa6.97□□□□□ -1.29
CD47-201ENST00000355354 FBXW7Q969H0 707 aa6.97□□□□□ -1.29
CD47-201ENST00000355354 ASAP1Q9ULH1 1129 aa6.97□□□□□ -1.29
CD47-201ENST00000355354 AKAP11Q9UKA4 1901 aa6.97□□□□□ -1.29
CD47-201ENST00000355354 ADRA2BP18089 450 aa6.97□□□□□ -1.29
CD47-201ENST00000355354 ZSCAN23Q3MJ62 389 aa6.97□□□□□ -1.29
CD47-201ENST00000355354 BCAS3Q9H6U6 928 aa6.97□□□□□ -1.29
CD47-201ENST00000355354 DIAPH1O60610 1272 aaKnown RBP6.97□□□□□ -1.29
CD47-201ENST00000355354 CMTR1Q8N1G2 835 aaKnown RBP6.97□□□□□ -1.29
CD47-201ENST00000355354 ZSWIM8A7E2V4 1837 aa6.97□□□□□ -1.29
CD47-201ENST00000355354 PGBD1Q96JS3 809 aa6.96□□□□□ -1.29
CD47-201ENST00000355354 FUCA2Q9BTY2 467 aa6.96□□□□□ -1.29
CD47-201ENST00000355354 HSD3B7Q9H2F3 369 aa6.96□□□□□ -1.29
CD47-201ENST00000355354 TPCN1Q9ULQ1 816 aa6.96□□□□□ -1.29
CD47-201ENST00000355354 ANKRD65E5RJM6 399 aa6.96□□□□□ -1.29
CD47-201ENST00000355354 RNF225M0QZC1 329 aaPredicted RBP6.96□□□□□ -1.29
CD47-201ENST00000355354 RXRAP19793 462 aa6.96□□□□□ -1.29
CD47-201ENST00000355354 DNM1Q05193 864 aaKnown RBP6.96□□□□□ -1.29
CD47-201ENST00000355354 ACSBG1Q96GR2 724 aa6.96□□□□□ -1.29
CD47-201ENST00000355354 FOXN1O15353 648 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 BMP6P22004 513 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 SF3B2Q13435 895 aaKnown RBP6.96□□□□□ -1.3
CD47-201ENST00000355354 CAMK4Q16566 473 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 ME3Q16798 604 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 CTDNEP1O95476 244 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 PDLIM2Q96JY6 352 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 SRCIN1Q9C0H9 1055 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 ZCCHC17Q9NP64 241 aaKnown RBP6.96□□□□□ -1.3
CD47-201ENST00000355354 TERF2IPQ9NYB0 399 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 DOCK2Q92608 1830 aa6.96□□□□□ -1.3
CD47-201ENST00000355354 CYP19A1P11511 503 aaPredicted RBP6.95□□□□□ -1.3
CD47-201ENST00000355354 CDC27P30260 824 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 TGFB2P61812 414 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 KIAA1211Q6ZU35 1233 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 KAT6AQ92794 2004 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 LOC102724428A0A0B4J2F2 783 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 SLC24A1O60721 1099 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 SIK1P57059 783 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 GUCY1B3Q02153 619 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 CDC37L1Q7L3B6 337 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 STK32BQ9NY57 414 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 USP35Q9P2H5 1018 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 TAF7Q15545 349 aaPredicted RBP6.95□□□□□ -1.3
CD47-201ENST00000355354 NBPF26B4DH59 902 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 ZSCAN20P17040 1043 aaPredicted RBP6.95□□□□□ -1.3
CD47-201ENST00000355354 SKOR2Q2VWA4 1001 aaPredicted RBP6.95□□□□□ -1.3
CD47-201ENST00000355354 NBPF10Q6P3W6 841 aaKnown RBP6.95□□□□□ -1.3
CD47-201ENST00000355354 NBPF15Q8N660 670 aa6.95□□□□□ -1.3
CD47-201ENST00000355354 NFE2L2Q16236 605 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 PPP1R42Q7Z4L9 355 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 CKAP2LQ8IYA6 745 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 ATF5Q9Y2D1 282 aaPredicted RBP6.94□□□□□ -1.3
CD47-201ENST00000355354 ANKRD12Q6UB98 2062 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 ATAD5Q96QE3 1844 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 CANXP27824 592 aaKnown RBP6.94□□□□□ -1.3
CD47-201ENST00000355354 EVA1CP58658 441 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 CWC27Q6UX04 472 aaKnown RBP6.94□□□□□ -1.3
CD47-201ENST00000355354 LUZP1Q86V48 1076 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 FTSJ3Q8IY81 847 aaKnown RBP6.94□□□□□ -1.3
CD47-201ENST00000355354 MYH2Q9UKX2 1941 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 LAMA4Q16363 1823 aa6.94□□□□□ -1.3
CD47-201ENST00000355354 ADD1P35611 737 aaKnown RBP6.94□□□□□ -1.3
CD47-201ENST00000355354 AIMP1Q12904 312 aaKnown RBP6.94□□□□□ -1.3
CD47-201ENST00000355354 UBE2Q2Q8WVN8 375 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms