RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PLA2R1Q13018 1463 aa19.02■□□□□ 0.64
SMARCA4-201ENST00000344626 IGHDP01880 384 aa19.02■□□□□ 0.64
SMARCA4-201ENST00000344626 PAF1Q8N7H5 531 aa19.02■□□□□ 0.64
SMARCA4-201ENST00000344626 DHX8Q14562 1220 aaKnown RBP19.02■□□□□ 0.64
SMARCA4-201ENST00000344626 MFSD14BQ5SR56 506 aa19.02■□□□□ 0.64
SMARCA4-201ENST00000344626 CERS3Q8IU89 383 aa19.02■□□□□ 0.63
SMARCA4-201ENST00000344626 DIP2BQ9P265 1576 aa19.02■□□□□ 0.63
SMARCA4-201ENST00000344626 CCT2P78371 535 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 ZYXQ15942 572 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 DEFB132Q7Z7B7 95 aa19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 DCPSQ96C86 337 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 TRIM5Q9C035 493 aa19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 TTF2Q9UNY4 1162 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 PPFIA3O75145 1194 aa19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 NBPF7P0C2Y1 421 aaPredicted RBP19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 IFIT1BQ5T764 474 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 TTLL6Q8N841 843 aa19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 SAMM50Q9Y512 469 aa19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 SDSP20132 328 aa19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 ZFYVE27Q5T4F4 411 aa19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 ZNHIT6Q9NWK9 470 aaKnown RBP19.01■□□□□ 0.63
SMARCA4-201ENST00000344626 TTLL5Q6EMB2 1281 aa19■□□□□ 0.63
SMARCA4-201ENST00000344626 SUCLG2Q96I99 432 aa19■□□□□ 0.63
SMARCA4-201ENST00000344626 PDCL3Q9H2J4 239 aa19■□□□□ 0.63
SMARCA4-201ENST00000344626 HOOK2Q96ED9 719 aa19■□□□□ 0.63
SMARCA4-201ENST00000344626 TANGO6Q9C0B7 1094 aa19■□□□□ 0.63
SMARCA4-201ENST00000344626 CTSWP56202 376 aa19■□□□□ 0.63
SMARCA4-201ENST00000344626 GIGYF2Q6Y7W6 1299 aaKnown RBP19■□□□□ 0.63
SMARCA4-201ENST00000344626 SCAND2PQ9GZW5 306 aaPredicted RBP19■□□□□ 0.63
SMARCA4-201ENST00000344626 TRIM21P19474 475 aaKnown RBP19■□□□□ 0.63
SMARCA4-201ENST00000344626 PIM2Q9P1W9 311 aa19■□□□□ 0.63
SMARCA4-201ENST00000344626 PCDHB15Q9Y5E8 787 aa19■□□□□ 0.63
SMARCA4-201ENST00000344626 LPIN2Q92539 896 aa18.99■□□□□ 0.63
SMARCA4-201ENST00000344626 DNAI2Q9GZS0 605 aa18.99■□□□□ 0.63
SMARCA4-201ENST00000344626 RPS6KA4O75676 772 aa18.99■□□□□ 0.63
SMARCA4-201ENST00000344626 TMOD4Q9NZQ9 345 aa18.99■□□□□ 0.63
SMARCA4-201ENST00000344626 MROH5Q6ZUA9 1318 aa18.99■□□□□ 0.63
SMARCA4-201ENST00000344626 ZBTB40Q9NUA8 1239 aa18.99■□□□□ 0.63
SMARCA4-201ENST00000344626 BRPF1P55201 1214 aaPredicted RBP18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 PPP1R12BO60237 982 aaPredicted RBP18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 TBC1D22AQ8WUA7 517 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 XAGE2Q96GT9 111 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 LARP6Q9BRS8 491 aaKnown RBP18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 CSADQ9Y600 493 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 NEURL1BA8MQ27 555 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 B4DLN1 442 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 SERPINC1P01008 464 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 MRPL12P52815 198 aaKnown RBP18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 GUCY1B3Q02153 619 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 ERFEQ4G0M1 354 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 ATP2B4P23634 1241 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 ZBTB38Q8NAP3 1195 aaPredicted RBP18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 ZNF592Q92610 1267 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 DBNDD2Q9BQY9 259 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 ADGRB3O60242 1522 aa18.98■□□□□ 0.63
SMARCA4-201ENST00000344626 PPEF1O14829 653 aaPredicted RBP18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 SKAP1Q86WV1 359 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 LUC7LQ9NQ29 371 aaKnown RBP18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 IVNS1ABPQ9Y6Y0 642 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 PRAMEF22A3QJZ6 481 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 CALM1P0DP23 149 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 CALM2P0DP24 149 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 CALM3P0DP25 149 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 TNFAIP1Q13829 316 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 C21orf2O43822 256 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 FERMT3Q86UX7 667 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 MBD4O95243 580 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 RDXP35241 583 aaKnown RBP18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 SCNN1DP51172 638 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 CCDC93Q567U6 631 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 CCDC148Q8NFR7 591 aa18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 SMCR8Q8TEV9 937 aaPredicted RBP18.97■□□□□ 0.63
SMARCA4-201ENST00000344626 ZBTB43O43298 467 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 NUP62CLQ9H1M0 184 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 SH2D4AQ9H788 454 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 DIP2CQ9Y2E4 1556 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 SPDYE4A6NLX3 237 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 RAD17O75943 681 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 ORC3Q9UBD5 711 aaPredicted RBP18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 CCDC173Q0VFZ6 552 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 RBM27Q9P2N5 1060 aaKnown RBP18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 KIF20AO95235 890 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 MRE11P49959 708 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 RNF214Q8ND24 703 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 RAD50Q92878 1312 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 CBFA2T2O43439 604 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 TXLNBQ8N3L3 684 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 ESYT1Q9BSJ8 1104 aa18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 AATFQ9NY61 560 aaKnown RBP eCLIP18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 RBM8AQ9Y5S9 174 aaKnown RBP18.96■□□□□ 0.63
SMARCA4-201ENST00000344626 LIG1P18858 919 aa18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 NASPP49321 788 aaPredicted RBP18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 TEKT1Q969V4 418 aa18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 SLC26A6Q9BXS9 759 aa18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 GYG1P46976 350 aa18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 NMIQ13287 307 aaPredicted RBP18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 DBNDD1Q9H9R9 158 aa18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 PROSER3Q2NL68 480 aa18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 SLC27A3Q5K4L6 730 aa18.95■□□□□ 0.62
SMARCA4-201ENST00000344626 KLF18A0A0U1RQI7 1052 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms