RNA–Protein interactions for RNA: ENST00000311371.9

SOX30-202, Transcript of SRY-box 30, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX30, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-202ENST00000311371 ZNF142P52746 1687 aaPredicted RBP18.72■□□□□ 0.59
SOX30-202ENST00000311371 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
SOX30-202ENST00000311371 KCNV1Q6PIU1 500 aa18.72■□□□□ 0.59
SOX30-202ENST00000311371 MPHOSPH8Q99549 860 aa18.72■□□□□ 0.59
SOX30-202ENST00000311371 JPH2Q9BR39 696 aaPredicted RBP18.72■□□□□ 0.59
SOX30-202ENST00000311371 ZSWIM6Q9HCJ5 1215 aa18.72■□□□□ 0.59
SOX30-202ENST00000311371 NRXN3Q9Y4C0 1643 aa18.72■□□□□ 0.59
SOX30-202ENST00000311371 LTKP29376 864 aa18.72■□□□□ 0.59
SOX30-202ENST00000311371 CCDC73Q6ZRK6 1079 aa18.72■□□□□ 0.59
SOX30-202ENST00000311371 CEP120Q8N960 986 aa18.72■□□□□ 0.59
SOX30-202ENST00000311371 FTOQ9C0B1 505 aaKnown RBP eCLIP18.72■□□□□ 0.59
SOX30-202ENST00000311371 ADCY9O60503 1353 aa18.71■□□□□ 0.59
SOX30-202ENST00000311371 SETBP1Q9Y6X0 1596 aa18.71■□□□□ 0.59
SOX30-202ENST00000311371 PSME1Q06323 249 aa18.71■□□□□ 0.59
SOX30-202ENST00000311371 PUF60Q9UHX1 559 aaKnown RBP18.71■□□□□ 0.59
SOX30-202ENST00000311371 ALKQ9UM73 1620 aa18.71■□□□□ 0.59
SOX30-202ENST00000311371 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
SOX30-202ENST00000311371 GIMAP7Q8NHV1 300 aa18.71■□□□□ 0.59
SOX30-202ENST00000311371 ABCB6Q9NP58 842 aa18.71■□□□□ 0.59
SOX30-202ENST00000311371 SETD1AO15047 1707 aaKnown RBP18.7■□□□□ 0.58
SOX30-202ENST00000311371 FOSBP53539 338 aa18.7■□□□□ 0.58
SOX30-202ENST00000311371 CLIC6Q96NY7 704 aa18.7■□□□□ 0.58
SOX30-202ENST00000311371 EXOC5O00471 708 aa18.7■□□□□ 0.58
SOX30-202ENST00000311371 ZSCAN12O43309 604 aa18.7■□□□□ 0.58
SOX30-202ENST00000311371 G2E3Q7L622 706 aa18.7■□□□□ 0.58
SOX30-202ENST00000311371 DPCR1Q3MIW9 517 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 GBP6Q6ZN66 633 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.69■□□□□ 0.58
SOX30-202ENST00000311371 PNKPQ96T60 521 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 PPP2R2CQ9Y2T4 447 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 TUBGCP6Q96RT7 1819 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 BIN1O00499 593 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 LMOD1P29536 600 aaPredicted RBP18.69■□□□□ 0.58
SOX30-202ENST00000311371 USP8P40818 1118 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 SLIT1O75093 1534 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 PNPLA6Q8IY17 1366 aa18.69■□□□□ 0.58
SOX30-202ENST00000311371 H3BQV1 296 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 CHMP4BP1P59074 171 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 DHX8Q14562 1220 aaKnown RBP18.68■□□□□ 0.58
SOX30-202ENST00000311371 IFFO2Q5TF58 517 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 CPLX2Q6PUV4 134 aaKnown RBP18.68■□□□□ 0.58
SOX30-202ENST00000311371 THEMISQ8N1K5 641 aaPredicted RBP18.68■□□□□ 0.58
SOX30-202ENST00000311371 SDF4Q9BRK5 362 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 ANKZF1Q9H8Y5 726 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 TERF2IPQ9NYB0 399 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 TXNDC2Q86VQ3 553 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 CNTROBQ8N137 903 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 FAM71BQ8TC56 605 aa18.68■□□□□ 0.58
SOX30-202ENST00000311371 PPP1R12AO14974 1030 aaPredicted RBP18.67■□□□□ 0.58
SOX30-202ENST00000311371 JAK2O60674 1132 aa18.67■□□□□ 0.58
SOX30-202ENST00000311371 CFAP45Q9UL16 551 aa18.67■□□□□ 0.58
SOX30-202ENST00000311371 L1RE1Q9UN81 338 aa18.67■□□□□ 0.58
SOX30-202ENST00000311371 ARHGAP23Q9P227 1491 aa18.67■□□□□ 0.58
SOX30-202ENST00000311371 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
SOX30-202ENST00000311371 ERLIN1O75477 346 aa18.67■□□□□ 0.58
SOX30-202ENST00000311371 CASP8Q14790 479 aa18.67■□□□□ 0.58
SOX30-202ENST00000311371 CCDC12Q8WUD4 166 aaPredicted RBP18.67■□□□□ 0.58
SOX30-202ENST00000311371 RABEP2Q9H5N1 569 aa18.67■□□□□ 0.58
SOX30-202ENST00000311371 IRF6O14896 467 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 RHOXF2BP0C7M4 288 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 CCT5P48643 541 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 RESTQ13127 1097 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 BIRC2Q13490 618 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 FAM43BQ6ZT52 329 aaPredicted RBP18.66■□□□□ 0.58
SOX30-202ENST00000311371 BRF1Q92994 677 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 RHOXF2Q9BQY4 288 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 ZKSCAN1P17029 563 aaPredicted RBP18.66■□□□□ 0.58
SOX30-202ENST00000311371 IBSPP21815 317 aaPredicted RBP18.66■□□□□ 0.58
SOX30-202ENST00000311371 SETQ01105 290 aaPredicted RBP18.66■□□□□ 0.58
SOX30-202ENST00000311371 KARSQ15046 597 aaKnown RBP18.66■□□□□ 0.58
SOX30-202ENST00000311371 FSIP1Q8NA03 581 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 FAM107BQ9H098 131 aa18.66■□□□□ 0.58
SOX30-202ENST00000311371 WDHD1O75717 1129 aaPredicted RBP18.65■□□□□ 0.58
SOX30-202ENST00000311371 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
SOX30-202ENST00000311371 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 MAP9Q49MG5 647 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 PI4K2BQ8TCG2 481 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 HNRNPLLQ8WVV9 542 aaKnown RBP18.65■□□□□ 0.58
SOX30-202ENST00000311371 SLC24A3Q9HC58 644 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 ECM2O94769 699 aaPredicted RBP18.65■□□□□ 0.58
SOX30-202ENST00000311371 ATP1A3P13637 1013 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 FANCCQ00597 558 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.65■□□□□ 0.58
SOX30-202ENST00000311371 AFAP1L1Q8TED9 768 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 FAM169AQ9Y6X4 670 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 NEBLO76041 1014 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 HDGFP51858 240 aaKnown RBP18.65■□□□□ 0.58
SOX30-202ENST00000311371 MAP2K1Q02750 393 aaPredicted RBP18.65■□□□□ 0.58
SOX30-202ENST00000311371 TRDNQ13061 729 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 KIFC2Q96AC6 838 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 TM6SF1Q9BZW5 370 aa18.65■□□□□ 0.58
SOX30-202ENST00000311371 ARHGEF28Q8N1W1 1705 aaKnown RBP18.64■□□□□ 0.58
SOX30-202ENST00000311371 RNF40O75150 1001 aa18.64■□□□□ 0.57
SOX30-202ENST00000311371 GRIPAP1Q4V328 841 aa18.64■□□□□ 0.57
SOX30-202ENST00000311371 GNL3LQ9NVN8 582 aaKnown RBP18.64■□□□□ 0.57
SOX30-202ENST00000311371 TULP4Q9NRJ4 1543 aa18.64■□□□□ 0.57
SOX30-202ENST00000311371 ME1P48163 572 aa18.64■□□□□ 0.57
SOX30-202ENST00000311371 FAM160A1Q05DH4 1040 aa18.64■□□□□ 0.57
SOX30-202ENST00000311371 SCRN1Q12765 414 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms