RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 CBX8Q9HC52 389 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 PAG1Q9NWQ8 432 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 RAD50Q92878 1312 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 DESP17661 470 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 PPP2R3AQ06190 1150 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 KRBA2Q6ZNG9 492 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 BRAPQ7Z569 592 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 CLSTN2Q9H4D0 955 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 BLMP54132 1417 aaPredicted RBP16.17■□□□□ 0.18
COL1A2-201ENST00000297268 KDM5BQ9UGL1 1544 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 PSMA7O14818 248 aa16.17■□□□□ 0.18
COL1A2-201ENST00000297268 NBPF7P0C2Y1 421 aaPredicted RBP16.16■□□□□ 0.18
COL1A2-201ENST00000297268 MYL5Q02045 173 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 KIF5AQ12840 1032 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 ELF2Q15723 593 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 VAT1LQ9HCJ6 419 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 GABPB1Q06547 395 aaPredicted RBP16.16■□□□□ 0.18
COL1A2-201ENST00000297268 PDE4BQ07343 736 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 COPS6Q7L5N1 327 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 IFNL2Q8IZJ0 200 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 TMTC2Q8N394 836 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 UQCRFS1P1P0C7P4 283 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 LMBR1LQ6UX01 489 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 CNNM2Q9H8M5 875 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 SNX14Q9Y5W7 946 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 FOXO3O43524 673 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 ATL3Q6DD88 541 aa16.16■□□□□ 0.18
COL1A2-201ENST00000297268 TNIP1Q15025 636 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 FAM173BQ6P4H8 233 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 LRRC27Q9C0I9 530 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 TRIM75PA6NK02 468 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 HOOK3Q86VS8 718 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 PAF1Q8N7H5 531 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 PPIP5K1Q6PFW1 1433 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 CETN1Q12798 172 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 CCDC155Q8N6L0 562 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 DUOX2Q9NRD8 1548 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 TUBBP07437 444 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 UBXN1Q04323 297 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 CRACR2BQ8N4Y2 399 aaPredicted RBP16.15■□□□□ 0.18
COL1A2-201ENST00000297268 OTUD6BQ8N6M0 293 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 SPAG5Q96R06 1193 aa16.15■□□□□ 0.18
COL1A2-201ENST00000297268 RPS6KB1P23443 525 aa16.14■□□□□ 0.17
COL1A2-201ENST00000297268 IL15P40933 162 aaPredicted RBP16.14■□□□□ 0.17
COL1A2-201ENST00000297268 DNAJC21Q5F1R6 531 aaKnown RBP16.14■□□□□ 0.17
COL1A2-201ENST00000297268 PPP1R9BQ96SB3 815 aa16.14■□□□□ 0.17
COL1A2-201ENST00000297268 CFAP43Q8NDM7 1665 aa16.14■□□□□ 0.17
COL1A2-201ENST00000297268 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.17
COL1A2-201ENST00000297268 CCDC42Q96M95 316 aa16.14■□□□□ 0.17
COL1A2-201ENST00000297268 ANKIB1Q9P2G1 1089 aa16.14■□□□□ 0.17
COL1A2-201ENST00000297268 IFIT1BQ5T764 474 aaKnown RBP16.14■□□□□ 0.17
COL1A2-201ENST00000297268 RNF113AO15541 343 aaKnown RBP16.13■□□□□ 0.17
COL1A2-201ENST00000297268 MSL1Q68DK7 614 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 CCDC121Q6ZUS5 278 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 SELENOOQ9BVL4 669 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 ZEB2O60315 1214 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 ESR2Q92731 530 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 FSD2A1L4K1 749 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 AKR1B15C9JRZ8 316 aaPredicted RBP16.13■□□□□ 0.17
COL1A2-201ENST00000297268 ZNF500O60304 480 aaPredicted RBP16.13■□□□□ 0.17
COL1A2-201ENST00000297268 ATP2B3Q16720 1220 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 CWF19L2Q2TBE0 894 aaKnown RBP16.13■□□□□ 0.17
COL1A2-201ENST00000297268 SLC4A8Q2Y0W8 1093 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 SLC9C2Q5TAH2 1124 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 LINS1Q8NG48 757 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 FAM76AQ8TAV0 307 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 PUS7Q96PZ0 661 aaKnown RBP16.13■□□□□ 0.17
COL1A2-201ENST00000297268 MMRN2Q9H8L6 949 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 SLC4A4Q9Y6R1 1079 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 ELP1O95163 1332 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 INSRP06213 1382 aa16.13■□□□□ 0.17
COL1A2-201ENST00000297268 TSC1Q92574 1164 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 NSRP1Q9H0G5 558 aaKnown RBP16.12■□□□□ 0.17
COL1A2-201ENST00000297268 FANCAO15360 1455 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 RAPGEF6Q8TEU7 1601 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 ASIC1P78348 528 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 CNGA4Q8IV77 575 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 CARD6Q9BX69 1037 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 UHRF1BP1Q6BDS2 1440 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 G2E3Q7L622 706 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 CUL5Q93034 780 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 NUTM2AQ8IVF1 878 aaPredicted RBP16.12■□□□□ 0.17
COL1A2-201ENST00000297268 ZFYVE9O95405 1425 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 A0A1W2PP64 1363 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 SLC27A2O14975 620 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 CEP57Q86XR8 500 aa16.12■□□□□ 0.17
COL1A2-201ENST00000297268 NPC1L1Q9UHC9 1359 aa16.11■□□□□ 0.17
COL1A2-201ENST00000297268 BRD1O95696 1058 aa16.11■□□□□ 0.17
COL1A2-201ENST00000297268 CTNNA2P26232 953 aa16.11■□□□□ 0.17
COL1A2-201ENST00000297268 IRX3P78415 501 aaPredicted RBP16.11■□□□□ 0.17
COL1A2-201ENST00000297268 CCDC129Q6ZRS4 1044 aa16.11■□□□□ 0.17
COL1A2-201ENST00000297268 TFCP2Q12800 502 aa16.11■□□□□ 0.17
COL1A2-201ENST00000297268 LEO1Q8WVC0 666 aaPredicted RBP16.11■□□□□ 0.17
COL1A2-201ENST00000297268 TRIM35Q9UPQ4 493 aa16.11■□□□□ 0.17
COL1A2-201ENST00000297268 LUC7L2Q9Y383 392 aaKnown RBP16.11■□□□□ 0.17
COL1A2-201ENST00000297268 SBNO2Q9Y2G9 1366 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms