RNA–Protein interactions for RNA: ENST00000295598.9

ATP1A1-201, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP1A1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-201ENST00000295598 LDHAL6AQ6ZMR3 332 aa15.16■□□□□ 0.02
ATP1A1-201ENST00000295598 BRINP3Q76B58 766 aa15.16■□□□□ 0.02
ATP1A1-201ENST00000295598 GREM2Q9H772 168 aa15.16■□□□□ 0.02
ATP1A1-201ENST00000295598 CNNM1Q9NRU3 951 aa15.16■□□□□ 0.02
ATP1A1-201ENST00000295598 KLF18A0A0U1RQI7 1052 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 FGAP02671 866 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 HS1BP3Q53T59 392 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 RRP12Q5JTH9 1297 aaKnown RBP15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 TRMT1Q9NXH9 659 aaKnown RBP15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 TMOD3Q9NYL9 352 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 TUBGCP6Q96RT7 1819 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 MED1Q15648 1581 aaPredicted RBP15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 NPHP1O15259 732 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 RNF113AO15541 343 aaKnown RBP15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 SF3A1Q15459 793 aaKnown RBP15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 FSIP1Q8NA03 581 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 FAM200AQ8TCP9 573 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 PHKBQ93100 1093 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 ZKSCAN3Q9BRR0 538 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 SCAND2PQ9GZW5 306 aaPredicted RBP15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 WTIPA6NIX2 430 aaPredicted RBP15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 GOLGA8BA8MQT2 603 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 PDIA3P30101 505 aaKnown RBP15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 ACSBG1Q96GR2 724 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 HMG20BQ9P0W2 317 aa15.15■□□□□ 0.02
ATP1A1-201ENST00000295598 RRP9O43818 475 aaKnown RBP15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 CCDC144BQ3MJ40 725 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 ADD1P35611 737 aaKnown RBP15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 IL15P40933 162 aaPredicted RBP15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 SPECC1Q5M775 1068 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 CCDC158Q5M9N0 1113 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 SDF4Q9BRK5 362 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 CLIC4Q9Y696 253 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 KDM3BQ7LBC6 1761 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 KRT32Q14532 448 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 SLC4A8Q2Y0W8 1093 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 CADPS2Q86UW7 1296 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 PIGBQ92521 554 aa15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.14■□□□□ 0.015e-12■□□□□ 8.3
ATP1A1-201ENST00000295598 V9GYY5 206 aaPredicted RBP15.14■□□□□ 0.01
ATP1A1-201ENST00000295598 EPB41L2O43491 1005 aaKnown RBP15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 IL2RBP14784 551 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 MICU3Q86XE3 530 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 SMIM22K7EJ46 135 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 PRC1O43663 620 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 LETM1O95202 739 aaPredicted RBP15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 IFIT5Q13325 482 aaKnown RBP15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 SLC9C2Q5TAH2 1124 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 UBE2Q2Q8WVN8 375 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 PIBF1Q8WXW3 757 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 ZBTB9Q96C00 473 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 CPLX1O14810 134 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 ZMYM1Q5SVZ6 1142 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 USPL1Q5W0Q7 1092 aa15.13■□□□□ 0.01
ATP1A1-201ENST00000295598 CACNA1FO60840 1977 aa15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 CHD2O14647 1828 aaKnown RBP15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 IGSF3O75054 1194 aa15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 FDPSP14324 419 aaKnown RBP15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 BTG4Q9NY30 223 aa15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 TRMT112Q9UI30 125 aaKnown RBP15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 BECN2A8MW95 431 aa15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 ITGA6P23229 1130 aa15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 CCDC24Q8N4L8 307 aa15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 ILDR1Q86SU0 546 aaPredicted RBP15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 CLSTN2Q9H4D0 955 aa15.12■□□□□ 0.01
ATP1A1-201ENST00000295598 ZNF335Q9H4Z2 1342 aaPredicted RBP15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 FOXP2O15409 715 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 GPAA1O43292 621 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 UVSSAQ2YD98 709 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 ORC3Q9UBD5 711 aaPredicted RBP15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 CLIP2Q9UDT6 1046 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 ZBTB1Q9Y2K1 713 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 GOLGA6L19H0YKK7 550 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 B4E1Z4 1266 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 MCAMP43121 646 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 PHKA1P46020 1223 aa15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 RALYLQ86SE5 291 aaKnown RBP15.11■□□□□ 0.01
ATP1A1-201ENST00000295598 hCG_1642624A0A1W2PR95 340 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 PFKFB2O60825 505 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 ATP2B3Q16720 1220 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 CCDC73Q6ZRK6 1079 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 AOPEPQ8N6M6 819 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 RIOK3O14730 519 aaKnown RBP15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 CTDSPL2Q05D32 466 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 STK38Q15208 465 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 KIF6Q6ZMV9 814 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 MIGA1Q8NAN2 632 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 CACTINQ8WUQ7 758 aaKnown RBP15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 WWC3Q9ULE0 1092 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 C5P01031 1676 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 USP27XA6NNY8 438 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 KIF28PB7ZC32 967 aa15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 KINO60870 393 aaKnown RBP15.1■□□□□ 0.01
ATP1A1-201ENST00000295598 PALLDQ8WX93 1383 aa15.09■□□□□ 0.01
ATP1A1-201ENST00000295598 NDUFA8P51970 172 aa15.09■□□□□ 0.01
ATP1A1-201ENST00000295598 CBX1P83916 185 aa15.09■□□□□ 0.01
ATP1A1-201ENST00000295598 TCIRG1Q13488 830 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms